Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 6.5e-94 347.4 182 100.0
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 1.8e-43 179.9 189 61.9
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 8.9e-43 177.6 195 60.0
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 1.7e-41 173.3 193 59.6
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 1.1e-40 170.6 187 57.8
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 4.1e-40 168.7 194 56.7
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 9.2e-40 167.5 196 60.7
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 2.1e-39 166.4 185 55.7
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 4.6e-39 165.2 124 73.4
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 4.6e-39 165.2 132 68.9
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 1.0e-38 164.1 193 57.0
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 1.3e-38 163.7 132 71.2
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.7e-38 163.3 191 59.2
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.3e-38 162.9 120 75.0
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 3.0e-38 162.5 198 54.5
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 3.0e-38 162.5 184 57.1
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 3.0e-38 162.5 190 57.4
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 3.0e-38 162.5 183 54.1
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 3.9e-38 162.2 192 55.2
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 6.6e-38 161.4 196 55.1
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 8.6e-38 161.0 193 56.0
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 1.1e-37 160.6 196 55.6
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.5e-37 160.2 136 65.4
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 2.5e-37 159.5 120 74.2
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 3.3e-37 159.1 132 68.2
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 5.6e-37 158.3 139 69.1
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 7.3e-37 157.9 133 69.2
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 7.3e-37 157.9 191 57.1
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 7.3e-37 157.9 120 73.3
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 9.5e-37 157.5 193 55.4
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 1.6e-36 156.8 185 55.1
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 1.6e-36 156.8 134 67.9
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.6e-36 156.8 194 55.7
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.1e-36 156.4 125 71.2
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.1e-36 156.4 125 71.2
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 2.1e-36 156.4 187 53.5
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.8e-36 156.0 191 56.5
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 2.8e-36 156.0 147 66.0
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 3.6e-36 155.6 120 70.8
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 4.7e-36 155.2 135 65.2
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 4.7e-36 155.2 188 54.8
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 4.7e-36 155.2 142 65.5
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 6.2e-36 154.8 141 61.7
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 8.1e-36 154.5 188 52.7
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 1.1e-35 154.1 143 65.7
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 1.1e-35 154.1 120 71.7
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 1.8e-35 153.3 194 54.1
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.8e-35 153.3 191 56.0
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 2.3e-35 152.9 121 73.6
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 3.1e-35 152.5 122 69.7
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 4.0e-35 152.1 146 65.8
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 6.8e-35 151.4 122 68.9
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 6.8e-35 151.4 145 65.5
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.2e-34 150.6 187 54.0
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 1.5e-34 150.2 187 54.5
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 1.5e-34 150.2 193 51.8
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 1.5e-34 150.2 193 53.9
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 2.0e-34 149.8 183 51.4
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 2.0e-34 149.8 120 73.3
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.0e-34 149.8 191 53.9
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 2.6e-34 149.4 120 68.3
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 2.6e-34 149.4 117 70.9
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 2.6e-34 149.4 186 57.5
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 3.4e-34 149.1 192 53.1
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 4.4e-34 148.7 199 51.8
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 4.4e-34 148.7 130 70.0
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 7.6e-34 147.9 211 50.7
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 2.9e-33 146.0 140 66.4
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 3.8e-33 145.6 145 63.4
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 4.9e-33 145.2 192 52.6
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 6.4e-33 144.8 122 68.0
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 6.4e-33 144.8 188 50.5
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 8.4e-33 144.4 120 70.8
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 1.9e-32 143.3 139 65.5
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 1.9e-32 143.3 121 69.4
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 1.9e-32 143.3 139 65.5
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 1.9e-32 143.3 139 65.5
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 5.4e-32 141.7 195 49.7
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.2e-31 140.6 130 65.4
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.2e-31 140.6 132 62.1
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 2.1e-31 139.8 122 68.0
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 3.5e-31 139.0 122 68.0
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 6.0e-31 138.3 171 55.6
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.0e-30 136.0 199 51.8
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 3.9e-30 135.6 120 66.7
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 6.6e-30 134.8 200 51.0
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 8.6e-30 134.4 142 56.3
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.1e-29 134.0 149 61.1
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 4.3e-29 132.1 98 71.4
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 4.3e-29 132.1 137 60.6
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 1.2e-28 130.6 124 61.3
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 1.1e-27 127.5 119 62.2
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 4.0e-27 125.6 122 62.3
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 8.9e-27 124.4 118 61.0
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 7.6e-26 121.3 140 59.3
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 2.9e-25 119.4 130 58.5
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 3.8e-25 119.0 140 58.6
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 4.9e-25 118.6 113 61.1
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 8.4e-25 117.9 87 71.3
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.9e-24 116.7 100 66.0
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 1.9e-24 116.7 99 64.6
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 1.6e-23 113.6 122 60.7
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 1.7e-22 110.2 124 58.1
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 7.3e-21 104.8 93 66.7
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 6.9e-19 98.2 83 63.9
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 6.4e-17 91.7 135 44.4
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 8.4e-17 91.3 81 63.0
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 8.4e-17 91.3 81 63.0
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 1.6e-15 87.0 121 47.1
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 6.0e-15 85.1 90 54.4
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 5.1e-14 82.0 83 59.0
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 1.1e-11 74.3 79 57.0
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 2.0e-10 70.1 153 32.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 5.8e-10 68.6 89 49.4
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 2.1e-07 60.1 53 58.5


User provided reference genes

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