Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 5.6e-139 497.7 260 100.0
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 1.6e-82 310.1 213 74.6
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 4.8e-82 308.5 212 76.4
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 6.2e-82 308.1 213 73.7
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 6.2e-82 308.1 196 79.6
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 4.0e-81 305.4 212 74.5
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 4.0e-81 305.4 212 74.5
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 6.9e-81 304.7 250 66.0
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 9.0e-81 304.3 213 72.8
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 9.0e-81 304.3 212 73.6
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 2.6e-80 302.8 212 73.6
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.4e-80 302.4 212 74.1
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 1.3e-79 300.4 243 67.1
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 3.8e-79 298.9 241 68.0
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 6.5e-79 298.1 212 72.6
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 8.4e-79 297.7 197 78.7
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 8.4e-79 297.7 212 72.2
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.1e-78 297.4 212 71.7
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 1.9e-78 296.6 218 72.5
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 2.5e-78 296.2 212 72.6
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 2.5e-78 296.2 241 67.2
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 2.5e-78 296.2 206 72.8
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 7.1e-78 294.7 213 73.7
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 2.7e-77 292.7 213 71.8
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 3.5e-77 292.4 195 74.9
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 6.0e-77 291.6 213 71.8
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 1.8e-76 290.0 213 71.8
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 2.3e-76 289.7 213 71.4
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 2.3e-76 289.7 196 76.5
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 1.1e-75 287.3 213 69.5
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.1e-75 287.3 197 75.6
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.9e-75 286.6 197 74.6
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 2.5e-75 286.2 211 70.6
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 3.3e-75 285.8 213 69.0
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 9.7e-75 284.3 212 71.2
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 1.6e-74 283.5 212 70.3
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 2.8e-74 282.7 213 69.5
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 4.8e-74 282.0 197 74.1
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.4e-73 280.4 212 68.9
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 1.4e-73 280.4 212 70.8
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 1.8e-73 280.0 209 69.9
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 1.2e-72 277.3 213 69.5
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 4.5e-72 275.4 195 72.3
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 7.6e-72 274.6 204 68.1
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 8.5e-71 271.2 203 71.4
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 1.6e-69 266.9 213 66.7
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 2.1e-69 266.5 240 61.7
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 2.7e-69 266.2 228 64.0
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 3.6e-69 265.8 213 66.2
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 3.6e-69 265.8 194 71.6
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 3.6e-69 265.8 213 67.1
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 6.1e-69 265.0 195 70.8
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 3.9e-68 262.3 195 70.8
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 1.5e-67 260.4 213 64.8
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 1.9e-67 260.0 213 64.8
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 1.9e-67 260.0 213 64.8
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 5.7e-67 258.5 195 68.7
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 7.4e-67 258.1 213 64.8
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 7.4e-67 258.1 195 69.7
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 7.4e-67 258.1 204 67.6
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 9.7e-67 257.7 186 72.0
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 1.7e-66 256.9 213 65.3
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 2.2e-66 256.5 213 65.3
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 2.2e-66 256.5 213 64.8
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 4.8e-66 255.4 195 68.2
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 6.3e-66 255.0 213 63.4
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 1.1e-65 254.2 194 68.0
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 1.8e-65 253.4 214 65.4
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 1.8e-65 253.4 166 78.3
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 4.1e-65 252.3 174 75.3
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 5.3e-65 251.9 199 66.3
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 5.3e-65 251.9 199 66.3
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 5.0e-63 245.4 213 62.0
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 5.0e-63 245.4 213 62.9
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 1.4e-62 243.8 210 60.5
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 3.2e-62 242.7 211 58.8
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 9.4e-62 241.1 213 62.9
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 2.3e-60 236.5 214 62.6
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 6.7e-60 235.0 156 78.8
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.1e-59 234.2 197 65.5
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 1.4e-57 227.3 166 71.1
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 5.3e-57 225.3 208 57.2
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 1.5e-56 223.8 187 62.6
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 1.9e-54 216.9 154 74.0
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 7.2e-54 214.9 136 80.9
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 6.7e-52 208.4 152 73.7
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 6.7e-52 208.4 179 64.2
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 2.0e-51 206.8 152 70.4
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 5.7e-51 205.3 134 74.6
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 5.5e-46 188.7 176 58.5
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 2.7e-45 186.4 195 55.4
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.0e-43 180.3 123 73.2
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 5.7e-43 178.7 319 37.9
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 1.1e-41 174.5 107 81.3
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 1.5e-38 164.1 166 56.0
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 2.6e-35 153.3 169 52.7
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.4e-33 147.5 144 56.2
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 2.3e-31 140.2 180 47.2
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 1.5e-30 137.5 143 56.6
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 1.5e-27 127.5 117 59.8
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.7e-23 114.0 77 76.6
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 5.0e-23 112.5 84 67.9
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 8.3e-18 95.1 80 61.2
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 6.0e-16 89.0 72 68.1
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.3e-14 83.2 61 68.9
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.7e-13 79.3 65 60.0
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 3.7e-10 69.7 45 73.3
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 3.7e-10 69.7 45 73.3
MBI18_g13207_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 9.2e-09 65.1 63 38.1
MBI19_g44806_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.3e-06 56.6 59 44.1
MBI15_g00084_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 5.6e-06 55.8 68 44.1


User provided reference genes

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