Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI09_g14155_MAGBIO Magnolia biondii HOM05D025692 ORTHO05D014708 3.4e-141 505.0 254 100.0
MBI13_g45947_MAGBIO Magnolia biondii HOM05D025692 ORTHO05D014708 5.2e-41 172.2 102 88.2
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 6.2e-26 122.1 242 39.7
MBI17_g39961_MAGBIO Magnolia biondii HOM05D025692 ORTHO05D014708 4.0e-17 92.8 57 86.0
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 9.3e-14 81.6 197 35.0
GSVIVG01009937001 Vitis vinifera HOM05D006932 ORTHO05D014708 4.6e-13 79.3 112 47.3
vmacro04363 Vaccinium macrocarpon HOM05D006932 ORTHO05D014708 1.0e-12 78.2 81 54.3
Nn5g30750 Nelumbo nucifera HOM05D006932 ORTHO05D009616 1.3e-12 77.8 163 38.0
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 8.7e-12 75.1 119 44.5
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 1.5e-11 74.3 115 44.3
Actinidia37937 Actinidia chinensis HOM05D006932 ORTHO05D009616 7.4e-11 72.0 176 31.8
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 2.1e-10 70.5 97 44.3
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 4.8e-10 69.3 115 42.6
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 6.2e-10 68.9 115 41.7
Nitab4.5_0003251g0090 Nicotiana tabacum HOM05D006932 ORTHO05D009616 8.1e-10 68.6 112 39.3
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.1e-09 68.2 115 42.6
FAN20G1755 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.8e-09 67.4 183 35.0
HanXRQChr14g0431041 Helianthus annuus HOM05D025692 ORTHO05D014708 4.0e-09 66.2 193 29.0
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 5.3e-09 65.9 192 30.7
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 6.9e-09 65.5 196 31.6
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 6.9e-09 65.5 113 41.6
Thecc.08G046600 Theobroma cacao HOM05D006932 ORTHO05D009616 9.0e-09 65.1 121 38.8
MD08G1010800 Malus domestica HOM05D006932 ORTHO05D009616 2.0e-08 63.9 59 52.5
CANSAT25G0116 Cannabis sativa HOM05D006932 ORTHO05D009616 3.4e-08 63.2 125 40.8
ClCG08G014220 Citrullus lanatus HOM05D006932 ORTHO05D009616 5.8e-08 62.4 179 30.2
Peaxi162Scf00553g00219 Petunia axillaris HOM05D006932 ORTHO05D014708 1.7e-07 60.8 103 37.9
Sopen08g012470 Solanum pennellii HOM05D006932 ORTHO05D009616 1.7e-07 60.8 156 31.4
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 2.2e-07 60.5 176 34.1
PSO700G0201 Papaver somniferum HOM05D006932 ORTHO05D009616 2.2e-07 60.5 86 44.2
PGR031G2736 Punica granatum HOM05D006932 ORTHO05D009616 2.2e-07 60.5 171 32.2
Eucgr.H00968 Eucalyptus grandis HOM05D006932 ORTHO05D014708 3.8e-07 59.7 149 34.2
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 3.8e-07 59.7 180 31.1
PGSC0003DMG400000962 Solanum tuberosum HOM05D006932 ORTHO05D014708 4.9e-07 59.3 139 33.8
SalBow7G2156 Salvia bowleyana HOM05D006932 ORTHO05D009616 6.4e-07 58.9 61 50.8
CsaV3_2G029620 Cucumis sativus L. HOM05D006932 ORTHO05D009616 8.4e-07 58.5 181 27.6
Gohir.D05G188400 Gossypium hirsutum HOM05D006932 ORTHO05D009616 8.4e-07 58.5 127 34.6
Solyc08g042040.4 Solanum lycopersicum HOM05D006932 ORTHO05D014708 8.4e-07 58.5 139 33.8
MELO3C011020.2 Cucumis melo HOM05D006932 ORTHO05D009616 1.1e-06 58.2 165 29.1
Migut.C00855 Erythranthe guttata HOM05D006932 ORTHO05D009616 1.9e-06 57.4 62 48.4
Thhalv10006798m.g Eutrema salsugineum HOM05D006932 ORTHO05D009616 2.4e-06 57.0 115 36.5
Gorai.009G193700 Gossypium raimondii HOM05D006932 ORTHO05D009616 2.4e-06 57.0 127 35.4
EL10Ac1g02169 Beta vulgaris HOM05D006932 ORTHO05D009616 4.2e-06 56.2 119 31.1
Prupe.1G363400 Prunus persica HOM05D006932 ORTHO05D009616 4.2e-06 56.2 56 53.6
Sed0011683 Sechium edule HOM05D006932 ORTHO05D009616 7.1e-06 55.5 129 29.5
Hund05180 Selenicereus undatus HOM05D006932 ORTHO05D009616 7.1e-06 55.5 91 35.2


User provided reference genes

Program Settings