Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 1.8e-103 379.4 211 100.0
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 1.9e-81 306.2 209 81.3
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 5.3e-71 271.6 207 73.9
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 9.9e-70 267.3 207 72.5
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 1.7e-69 266.5 209 68.9
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 2.9e-69 265.8 208 70.7
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 4.9e-69 265.0 209 69.4
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 3.2e-68 262.3 211 68.2
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 7.1e-68 261.2 211 69.2
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 2.1e-67 259.6 212 69.3
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 7.9e-67 257.7 209 67.9
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 1.7e-66 256.5 210 65.7
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.7e-66 256.5 211 65.9
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 3.0e-66 255.8 211 68.2
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 3.9e-66 255.4 209 66.5
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 8.7e-66 254.2 219 65.3
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 8.7e-66 254.2 211 65.4
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 1.1e-65 253.8 212 68.9
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 2.5e-65 252.7 210 66.7
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 6.2e-64 248.1 200 69.0
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 6.2e-64 248.1 209 66.0
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 8.1e-64 247.7 211 66.4
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 1.1e-63 247.3 214 66.4
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.1e-63 247.3 211 65.4
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 1.4e-63 246.9 210 65.2
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 2.4e-63 246.1 213 65.7
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 6.9e-63 244.6 225 62.7
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.2e-62 243.8 210 66.7
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 1.2e-62 243.8 216 65.3
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 2.6e-62 242.7 214 65.9
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.4e-62 242.3 211 64.0
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 4.5e-62 241.9 213 63.8
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 5.8e-62 241.5 214 65.4
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 1.7e-61 240.0 206 63.6
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 6.4e-61 238.0 209 66.5
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 2.4e-60 236.1 210 65.7
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 4.2e-60 235.3 213 62.9
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 4.6e-59 231.9 214 63.1
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 7.9e-59 231.1 210 62.4
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 1.8e-58 229.9 196 63.3
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 2.3e-58 229.6 220 58.2
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 3.9e-58 228.8 176 67.6
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 8.7e-58 227.6 209 63.2
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 1.5e-57 226.9 211 61.6
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 5.6e-57 224.9 176 66.5
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 5.6e-57 224.9 176 66.5
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 6.2e-56 221.5 225 56.0
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 8.1e-56 221.1 210 61.0
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.4e-55 220.3 210 60.5
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 1.8e-55 219.9 166 69.3
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 1.8e-55 219.9 168 69.6
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 3.1e-55 219.2 214 58.9
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 4.0e-55 218.8 214 58.9
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 4.0e-55 218.8 215 56.7
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 4.0e-55 218.8 213 62.4
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 5.3e-55 218.4 206 62.6
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 6.9e-55 218.0 209 61.7
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 1.2e-54 217.2 212 58.5
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 7.6e-54 214.5 212 57.1
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 1.0e-53 214.2 173 67.1
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 1.0e-53 214.2 210 58.1
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 1.3e-53 213.8 175 66.3
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.9e-52 209.9 217 59.0
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 4.2e-52 208.8 212 56.6
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 9.3e-52 207.6 209 59.3
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 4.6e-51 205.3 214 56.1
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 6.0e-51 204.9 212 57.1
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 3.0e-50 202.6 193 59.1
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 5.1e-50 201.8 210 55.2
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 5.1e-50 201.8 212 56.1
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 8.7e-50 201.1 210 54.8
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 2.5e-49 199.5 193 58.5
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 3.3e-49 199.1 211 55.0
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 9.6e-49 197.6 211 55.0
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 2.1e-48 196.4 221 52.9
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 3.7e-48 195.7 254 50.8
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 2.6e-46 189.5 169 61.5
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 3.4e-46 189.1 176 56.2
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 1.7e-45 186.8 206 55.3
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 2.9e-45 186.0 156 64.7
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 2.9e-45 186.0 155 66.5
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 3.8e-45 185.7 215 52.6
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.1e-44 184.1 202 54.0
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 3.2e-44 182.6 211 52.6
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 7.1e-44 181.4 215 53.5
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 2.7e-43 179.5 204 49.0
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 4.6e-43 178.7 144 66.7
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.9e-41 173.3 156 62.8
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 5.7e-41 171.8 158 62.0
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 6.3e-40 168.3 147 63.9
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 8.2e-40 167.9 146 64.4
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 4.1e-39 165.6 168 56.5
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 1.7e-37 160.2 151 59.6
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 1.7e-37 160.2 212 50.0
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 6.5e-37 158.3 154 59.7
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 8.5e-37 157.9 216 48.6
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 8.5e-37 157.9 215 52.6
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 7.2e-36 154.8 151 58.3
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 7.2e-36 154.8 156 55.8
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 2.1e-35 153.3 209 47.8
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 3.6e-35 152.5 210 48.6
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 1.1e-33 147.5 174 51.7
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 1.7e-32 143.7 191 44.0
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 1.7e-32 143.7 213 50.2
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 5.5e-28 128.6 212 44.8
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 1.0e-26 124.4 168 48.8
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.1e-25 120.9 191 41.4
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 1.7e-24 117.1 141 46.1
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.4e-23 114.0 204 42.2
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 7.0e-23 111.7 100 67.0
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 1.3e-21 107.5 131 54.2
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 3.6e-19 99.4 101 55.4
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 1.1e-17 94.4 191 40.8
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 2.6e-17 93.2 88 61.4
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.8e-13 79.3 77 59.7
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 5.5e-12 75.5 167 36.5
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 6.1e-11 72.0 68 60.3
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 8.0e-11 71.6 167 35.9
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.0e-11 71.6 133 39.8
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 1.0e-10 71.2 54 72.2
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 1.4e-10 70.9 95 45.3
TAR636G0634 Trochodendron aralioides HOM05D006133 ORTHO05D007855 1.7e-08 63.9 136 40.4
Eucgr.B00904 Eucalyptus grandis HOM05D006133 ORTHO05D007855 3.7e-08 62.8 144 36.1
BraA05t20121Z Brassica rapa HOM05D006133 ORTHO05D007855 2.4e-07 60.1 79 45.6
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 9.1e-07 58.2 41 75.6
Zm00001eb131680 Zea mays HOM05D006133 ORTHO05D446205 9.1e-07 58.2 66 48.5
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 9.1e-07 58.2 116 37.9
Eucgr.B00952 Eucalyptus grandis HOM05D006133 ORTHO05D007855 2.0e-06 57.0 98 39.8


User provided reference genes

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