Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 5.5e-33 144.1 92 100.0
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 5.7e-14 80.9 63 65.1
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 6.3e-13 77.4 63 58.7
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.4e-12 76.3 63 60.3
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.4e-12 76.3 63 60.3
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 3.1e-12 75.1 63 60.3
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 1.2e-11 73.2 63 58.7
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 1.2e-11 73.2 62 69.4
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.6e-11 72.8 63 55.6
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 1.6e-11 72.8 63 58.7
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 2.0e-11 72.4 69 58.0
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 2.0e-11 72.4 69 58.0
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 2.7e-11 72.0 63 85.7
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 2.7e-11 72.0 67 55.2
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 2.7e-11 72.0 63 58.7
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 2.7e-11 72.0 63 58.7
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 3.5e-11 71.6 63 57.1
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 7.8e-11 70.5 37 78.4
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.0e-10 70.1 37 83.8
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.0e-10 70.1 37 83.8
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 1.0e-10 70.1 36 86.1
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 1.3e-10 69.7 37 81.1
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 1.3e-10 69.7 63 57.1
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 1.3e-10 69.7 63 57.1
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 1.3e-10 69.7 37 81.1
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 1.3e-10 69.7 37 81.1
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 1.3e-10 69.7 66 51.5
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 1.3e-10 69.7 37 81.1
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.3e-10 69.7 37 81.1
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.7e-10 69.3 59 59.3
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 1.7e-10 69.3 59 55.9
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 1.7e-10 69.3 37 78.4
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 2.3e-10 68.9 64 54.7
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 2.3e-10 68.9 64 54.7
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 2.9e-10 68.6 61 70.5
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.9e-10 68.6 37 81.1
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 2.9e-10 68.6 37 81.1
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 2.9e-10 68.6 63 52.4
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 2.9e-10 68.6 64 54.7
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 2.9e-10 68.6 36 83.3
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 3.8e-10 68.2 37 81.1
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 3.8e-10 68.2 63 54.0
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 6.6e-10 67.4 36 80.6
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 6.6e-10 67.4 64 53.1
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 6.6e-10 67.4 63 54.0
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 8.6e-10 67.0 59 55.9
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 8.6e-10 67.0 63 52.4
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 1.9e-09 65.9 58 56.9
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.9e-09 65.9 63 50.8
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 2.5e-09 65.5 59 52.5
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 5.6e-09 64.3 61 54.1
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 9.5e-09 63.5 65 76.9
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 9.5e-09 63.5 68 61.8
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 2.1e-08 62.4 71 47.9
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 2.1e-08 62.4 63 52.4
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 2.8e-08 62.0 73 46.6
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 3.6e-08 61.6 63 47.6
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 4.7e-08 61.2 61 52.5
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.0e-07 60.1 63 49.2
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 1.0e-07 60.1 33 72.7
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 2.3e-07 58.9 61 47.5
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 4.0e-07 58.2 29 86.2
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 5.2e-07 57.8 57 50.9
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 8.9e-07 57.0 57 50.9
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.0e-06 55.8 57 50.9
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 2.6e-06 55.5 29 72.4
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 3.4e-06 55.1 29 82.8
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 3.4e-06 55.1 29 82.8
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 7.5e-06 53.9 29 79.3
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 9.8e-06 53.5 29 75.9


User provided reference genes

Program Settings