Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI09_g02136_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 4.3e-127 458.0 229 100.0
MBI12_g27791_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.4e-77 293.5 190 83.7
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 3.7e-62 242.3 198 67.7
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 1.8e-61 240.0 192 68.2
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 2.4e-61 239.6 189 68.3
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 2.4e-61 239.6 189 68.3
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 5.3e-61 238.4 203 64.5
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 1.0e-59 234.2 189 66.7
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 5.0e-59 231.9 189 66.1
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 2.5e-58 229.6 189 66.1
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 3.2e-58 229.2 189 65.1
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 5.5e-58 228.4 190 66.3
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 2.3e-56 223.0 189 63.5
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 6.8e-56 221.5 189 66.7
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 6.8e-56 221.5 189 64.0
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 1.2e-55 220.7 189 62.4
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 2.0e-55 219.9 193 64.2
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 2.6e-55 219.5 190 63.2
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 3.4e-55 219.2 189 63.5
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 4.4e-55 218.8 190 63.2
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 1.3e-54 217.2 189 64.0
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 2.2e-54 216.5 191 62.8
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 2.8e-54 216.1 189 63.5
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 2.8e-54 216.1 189 63.5
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 3.7e-54 215.7 189 64.0
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 4.8e-54 215.3 203 59.6
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 3.1e-53 212.6 190 62.1
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 5.4e-53 211.8 189 62.4
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 7.0e-53 211.5 189 60.8
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 1.2e-52 210.7 190 60.0
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 1.7e-51 206.8 195 60.0
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 3.8e-51 205.7 194 59.3
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 5.0e-51 205.3 189 61.4
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.1e-50 204.1 189 58.7
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 1.1e-50 204.1 176 63.1
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 2.5e-50 203.0 189 59.8
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 2.5e-50 203.0 189 60.3
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 3.3e-50 202.6 192 62.5
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 9.5e-50 201.1 189 60.3
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 1.2e-49 200.7 164 65.9
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 1.2e-49 200.7 189 62.4
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 2.1e-49 199.9 189 61.9
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 2.8e-49 199.5 192 61.5
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 8.0e-49 198.0 165 65.5
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 4.0e-48 195.7 163 65.6
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 1.2e-47 194.1 166 63.9
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 1.2e-47 194.1 204 55.4
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 1.2e-47 194.1 189 55.6
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 1.5e-47 193.7 161 65.8
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 2.6e-47 193.0 191 59.2
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 3.4e-47 192.6 189 57.1
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 3.4e-47 192.6 210 54.3
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 9.8e-47 191.0 191 58.6
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 1.3e-46 190.7 190 56.8
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 1.3e-46 190.7 189 58.2
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 2.2e-46 189.9 189 57.7
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 4.9e-46 188.7 176 60.2
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 6.3e-46 188.3 192 56.8
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.3e-46 188.0 189 55.6
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 1.1e-45 187.6 189 55.6
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 1.4e-45 187.2 189 57.1
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 1.8e-45 186.8 189 56.6
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 4.1e-45 185.7 227 51.1
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 4.1e-45 185.7 189 56.1
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 9.2e-45 184.5 189 54.5
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 1.6e-44 183.7 158 63.3
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 2.0e-44 183.3 189 56.1
MBI12_g47801_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.7e-43 180.3 189 58.2
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 3.9e-43 179.1 189 56.6
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 3.9e-43 179.1 206 52.4
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 5.6e-42 175.3 176 56.8
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 3.6e-41 172.6 159 64.2
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 8.0e-41 171.4 189 52.4
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 4.4e-39 165.6 189 50.8
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 4.9e-38 162.2 217 46.5
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 3.5e-36 156.0 189 49.7
ECA240G4745 Erigeron canadensis HOM05D005826 ORTHO05D004357 1.3e-35 154.1 200 52.0
Rhsim11G0104700 Rhododendron simsii HOM05D005826 ORTHO05D004357 1.7e-35 153.7 165 55.8
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 2.3e-35 153.3 194 51.5
MBI06_g28828_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 3.9e-35 152.5 152 59.9
SMO196G0190 Selaginella moellendorffii HOM05D005826 ORTHO05D004357 6.6e-35 151.8 170 51.8
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.3e-32 143.3 189 47.1
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 4.0e-32 142.5 189 47.6
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 4.0e-32 142.5 189 47.1
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 1.2e-31 141.0 189 47.6
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 4.4e-31 139.0 189 46.0
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 9.8e-31 137.9 189 47.1
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 3.7e-30 136.0 189 47.1
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 4.9e-30 135.6 189 47.1
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.3e-30 134.8 189 46.0
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 1.4e-29 134.0 189 46.6
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis HOM05D005826 ORTHO05D004357 2.4e-29 133.3 143 54.5
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 2.4e-29 133.3 189 46.0
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 5.4e-29 132.1 189 45.0
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 1.2e-28 131.0 189 45.0
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 1.2e-28 131.0 189 45.0
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 1.6e-28 130.6 177 47.5
CBR_g48434 Chara braunii HOM05D005826 ORTHO05D004357 2.1e-28 130.2 114 63.2
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 1.0e-27 127.9 189 45.5
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 3.0e-27 126.3 189 43.4
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 6.6e-27 125.2 182 44.5
Os04g0115400 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 1.1e-26 124.4 134 57.5
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 5.6e-26 122.1 189 45.0
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 5.6e-26 122.1 189 45.0
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 7.3e-26 121.7 181 47.0
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 1.4e-24 117.5 189 43.9
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 4.0e-24 115.9 189 43.9
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 1.2e-23 114.4 189 39.7
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 1.2e-23 114.4 189 39.7
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 7.6e-23 111.7 189 40.2
CARHR186850 Cardamine hirsuta HOM05D005826 ORTHO05D004357 2.9e-22 109.8 189 40.2
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 5.4e-21 105.5 189 38.1
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 5.4e-21 105.5 189 38.1
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 5.4e-21 105.5 189 38.1
MELO3C021663.2 Cucumis melo HOM05D005826 ORTHO05D004357 1.8e-16 90.5 64 75.0
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 4.0e-16 89.4 189 34.4
BcaNung03909 Brassica carinata HOM05D005826 ORTHO05D004357 7.6e-15 85.1 128 43.0
MELO3C015241.2 Cucumis melo HOM05D005826 ORTHO05D004357 1.7e-14 84.0 108 52.8
BcaNung03680 Brassica carinata HOM05D005826 ORTHO05D004357 1.6e-12 77.4 90 54.4
C07p41530 Brassica napus HOM05D005826 ORTHO05D004357 3.0e-11 73.2 87 54.0
BolC7t44686H Brassica oleracea HOM05D005826 ORTHO05D004357 3.0e-11 73.2 87 54.0
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 3.6e-09 66.2 42 71.4
PGR083G0870 Punica granatum HOM05D005826 ORTHO05D004357 6.2e-09 65.5 42 71.4
Cre03.g201250 Chlamydomonas reinhardtii HOM05D005826 ORTHO05D004357 6.9e-08 62.0 123 36.6
Os05g0229475 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 4.9e-06 55.8 50 60.0


User provided reference genes

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