Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 1.1e-89 333.2 158 100.0
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 4.4e-62 241.5 179 73.2
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 8.5e-58 227.3 116 93.1
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 8.5e-58 227.3 116 93.1
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.9e-49 199.5 116 86.2
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.5e-46 189.9 116 81.9
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.8e-45 185.7 97 88.7
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 3.1e-44 182.2 91 94.5
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.4e-44 181.4 91 93.4
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 4.7e-40 168.3 116 72.4
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.0e-39 167.2 94 84.0
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 9.8e-38 160.6 173 54.9
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 9.8e-38 160.6 100 79.0
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.7e-34 149.8 75 93.3
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.5e-33 146.7 144 61.1
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 5.2e-31 138.3 149 59.1
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 1.1e-28 130.6 172 48.8
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 2.0e-27 126.3 116 60.3
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.5e-27 125.6 97 68.0
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.7e-26 123.2 101 65.3
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.9e-26 122.1 170 48.8
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 9.5e-25 117.5 101 62.4
Zm00001eb441600 Zea mays HOM05D008037 ORTHO05D004271 1.2e-24 117.1 105 64.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.6e-24 115.5 58 89.7
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 2.3e-23 112.8 59 89.8
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 3.1e-23 112.5 66 81.8
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 6.8e-23 111.3 116 54.3
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 6.8e-23 111.3 116 54.3
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.5e-22 110.2 80 72.5
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 1.1e-20 104.0 80 70.0
Nitab4.5_0001986g0120 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.2e-20 102.4 91 61.5
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.2e-20 102.4 54 83.3
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.7e-19 99.4 57 78.9
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 3.9e-18 95.5 72 70.8
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 7.3e-17 91.3 114 49.1
EL10Ac6g13942 Beta vulgaris HOM05D008037 ORTHO05D004271 2.8e-16 89.4 49 87.8
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 6.2e-16 88.2 114 45.6
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 2.3e-15 86.3 78 62.8
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 4.0e-15 85.5 92 59.8
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 2.0e-14 83.2 127 48.0
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 2.6e-14 82.8 42 95.2
Solyc03g058260.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 7.5e-14 81.3 64 60.9
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 9.8e-14 80.9 46 82.6
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.9e-13 79.3 74 59.5
BolSC45t60899H Brassica oleracea HOM05D008016 ORTHO05D004271 1.9e-12 76.6 52 78.8
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 9.2e-12 74.3 109 45.9
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.2e-11 73.9 63 65.1
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 4.6e-11 72.0 40 85.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 6.0e-11 71.6 31 100.0
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 6.0e-11 71.6 31 100.0
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 6.0e-11 71.6 31 100.0
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 7.8e-11 71.2 64 60.9
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 1.0e-10 70.9 51 66.7
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.3e-10 70.5 32 90.6
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 1.7e-10 70.1 31 96.8
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 3.0e-10 69.3 31 96.8
EL10Ac6g14592 Beta vulgaris HOM05D008354 ORTHO05D010055 3.9e-10 68.9 36 94.4
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 5.1e-10 68.6 31 96.8
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 5.1e-10 68.6 31 96.8
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 5.1e-10 68.6 31 96.8
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 6.6e-10 68.2 31 93.5
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.5e-09 66.2 33 87.9
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.5e-09 66.2 32 90.6
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 3.3e-09 65.9 112 37.5
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 4.3e-09 65.5 30 93.3
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.3e-09 65.5 31 90.3
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 5.6e-09 65.1 31 90.3
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.6e-09 65.1 30 93.3
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 7.3e-09 64.7 31 90.3
Phvul.009G203800 Phaseolus vulgaris HOM05D008037 ORTHO05D004271 9.5e-09 64.3 46 73.9
Solyc03g150126.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 9.5e-09 64.3 102 44.1
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.6e-08 63.5 45 80.0
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 1.6e-08 63.5 45 80.0
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.6e-08 63.5 45 80.0
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 2.8e-08 62.8 31 90.3
Manes.07G046200 Manihot esculenta HOM05D008037 ORTHO05D004271 3.6e-08 62.4 40 70.0
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 4.7e-08 62.0 32 84.4
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 8.1e-08 61.2 27 96.3
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 3.1e-07 59.3 33 78.8
EL10Ac9g22450 Beta vulgaris HOM05D008037 ORTHO05D004271 5.2e-07 58.5 29 93.1
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 5.2e-07 58.5 33 81.8
Sed0006095 Sechium edule HOM05D010190 ORTHO05D010055 6.8e-07 58.2 43 76.7
EL10As18g24159 Beta vulgaris HOM05D008037 ORTHO05D004271 8.9e-07 57.8 56 58.9
BolSC49t61153H Brassica oleracea HOM05D008016 ORTHO05D010588 8.9e-07 57.8 45 68.9
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 8.9e-07 57.8 102 36.3
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 2.0e-06 56.6 45 68.9
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 2.0e-06 56.6 45 68.9
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 2.0e-06 56.6 45 68.9
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 2.0e-06 56.6 45 68.9
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 2.0e-06 56.6 45 68.9
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 2.0e-06 56.6 45 68.9
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 2.0e-06 56.6 45 68.9
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 2.0e-06 56.6 45 68.9
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 2.0e-06 56.6 45 68.9
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 2.6e-06 56.2 29 82.8
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 3.4e-06 55.8 40 75.0
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 9.9e-06 54.3 30 80.0
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 9.9e-06 54.3 23 100.0


User provided reference genes

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