Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g41673_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 2.9e-78 295.0 136 100.0
MBI06_g44152_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 1.0e-35 153.7 94 81.9
MBI05_g16175_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 1.3e-33 146.7 89 82.0
Nn2g12941 Nelumbo nucifera HOM05D001787 ORTHO05D007379 6.5e-30 134.4 91 69.2
TAR369G0202 Trochodendron aralioides HOM05D001787 ORTHO05D007379 3.2e-29 132.1 91 69.2
Lsat_1_v5_gn_9_66800 Lactuca sativa HOM05D001787 ORTHO05D007379 1.2e-28 130.2 91 68.1
Aqoxy4G03125 Aquilegia oxysepala HOM05D001787 ORTHO05D007379 2.1e-28 129.4 91 69.2
ECA232G1288 Erigeron canadensis HOM05D001787 ORTHO05D007379 2.7e-28 129.0 91 68.1
Ciclev10032030m.g Citrus clementina HOM05D001787 ORTHO05D007379 6.0e-28 127.9 91 68.1
PSO384G4279 Papaver somniferum HOM05D001787 ORTHO05D007379 6.0e-28 127.9 91 67.0
HanXRQChr09g0247601 Helianthus annuus HOM05D001787 ORTHO05D007379 7.9e-28 127.5 91 67.0
Lj1A929T67 Lonicera japonica HOM05D001787 ORTHO05D007379 1.0e-27 127.1 91 67.0
Dinv31384 Davidia involucrata HOM05D001787 ORTHO05D007379 1.3e-27 126.7 91 67.0
Rhsim03G0121100 Rhododendron simsii HOM05D001787 ORTHO05D007379 5.1e-27 124.8 91 67.0
HPP92_021198 Vanilla planifolia HOM05D001787 ORTHO05D007379 5.1e-27 124.8 91 65.9
Prupe.2G221900 Prunus persica HOM05D001787 ORTHO05D007379 6.7e-27 124.4 91 64.8
Cfa001565 Carpinus fangiana HOM05D001787 ORTHO05D007379 8.7e-27 124.0 90 64.4
Haze_16963 Corylus avellana HOM05D001787 ORTHO05D007379 8.7e-27 124.0 90 65.6
CANSAT78G1459 Cannabis sativa HOM05D001787 ORTHO05D007379 1.1e-26 123.6 91 60.4
RcHm_v2.0_Chr1g0364681 Rosa chinensis HOM05D001787 ORTHO05D007379 1.1e-26 123.6 91 64.8
Actinidia38231 Actinidia chinensis HOM05D001787 ORTHO05D007379 1.5e-26 123.2 91 65.9
Ciclev10032318m.g Citrus clementina HOM05D001787 ORTHO05D007379 1.5e-26 123.2 91 64.8
CAN.G1465.16 Capsicum annuum HOM05D001787 ORTHO05D007379 1.9e-26 122.9 91 67.0
CiPaw.01G279000 Carya illinoinensis HOM05D001787 ORTHO05D007379 1.9e-26 122.9 91 64.8
FAN03G1672 Fragaria x ananassa HOM05D001787 ORTHO05D007379 1.9e-26 122.9 91 63.7
FvH4_7g20650 Fragaria vesca HOM05D001787 ORTHO05D007379 3.3e-26 122.1 91 63.7
FAN06G2736 Fragaria x ananassa HOM05D001787 ORTHO05D007379 3.3e-26 122.1 91 63.7
FAN06G3907 Fragaria x ananassa HOM05D001787 ORTHO05D007379 3.3e-26 122.1 91 63.7
MD07G1183200 Malus domestica HOM05D001787 ORTHO05D007379 3.3e-26 122.1 91 64.8
Nitab4.5_0003965g0070 Nicotiana tabacum HOM05D001787 ORTHO05D007379 3.3e-26 122.1 91 67.0
PGSC0003DMG400023411 Solanum tuberosum HOM05D001787 ORTHO05D007379 3.3e-26 122.1 91 65.9
Lj5g0019356 Lotus japonicus HOM05D001787 ORTHO05D007379 4.3e-26 121.7 91 63.7
Os12g0502500 Oryza sativa ssp. japonica HOM05D001787 ORTHO05D007379 4.3e-26 121.7 90 62.2
Solyc05g054940.3 Solanum lycopersicum HOM05D001787 ORTHO05D007379 4.3e-26 121.7 91 65.9
Sopen05g033400 Solanum pennellii HOM05D001787 ORTHO05D007379 4.3e-26 121.7 91 65.9
FAN10G0756 Fragaria x ananassa HOM05D001787 ORTHO05D007379 5.7e-26 121.3 91 62.6
Sed0008817 Sechium edule HOM05D001787 ORTHO05D007379 5.7e-26 121.3 91 63.7
Actinidia03009 Actinidia chinensis HOM05D001787 ORTHO05D007379 7.4e-26 120.9 91 64.8
TPR.G10398 Trifolium pratense HOM05D001787 ORTHO05D007379 7.4e-26 120.9 91 63.7
Zm00001eb409400 Zea mays HOM05D001787 ORTHO05D007379 7.4e-26 120.9 90 60.0
EL10Ac2g03517 Beta vulgaris HOM05D001787 ORTHO05D007379 9.7e-26 120.6 91 64.8
QL08p057423 Quercus lobata HOM05D001787 ORTHO05D007379 9.7e-26 120.6 91 63.7
Sc06g0001840 Simmondsia chinensis HOM05D001787 ORTHO05D007379 1.3e-25 120.2 91 63.7
CSS0020776 Camellia sinensis var. sinensis HOM05D001787 ORTHO05D007379 1.6e-25 119.8 91 64.8
CSS0041014 Camellia sinensis var. sinensis HOM05D001787 ORTHO05D007379 1.6e-25 119.8 91 64.8
ClCG02G013710 Citrullus lanatus HOM05D001787 ORTHO05D007379 2.2e-25 119.4 91 62.6
AUR62043536 Chenopodium quinoa HOM05D001787 ORTHO05D007379 3.7e-25 118.6 91 64.8
Ca_11343_v3 Cicer arietinum L. HOM05D001787 ORTHO05D007379 3.7e-25 118.6 91 62.6
Ca_30325_v3 Cicer arietinum L. HOM05D001787 ORTHO05D007379 3.7e-25 118.6 91 62.6
FAN01G1155 Fragaria x ananassa HOM05D001787 ORTHO05D007379 3.7e-25 118.6 91 61.5
FAN01G1685 Fragaria x ananassa HOM05D001787 ORTHO05D007379 3.7e-25 118.6 91 61.5
GSVIVG01032636001 Vitis vinifera HOM05D001787 ORTHO05D007379 3.7e-25 118.6 91 64.8
arahy.Tifrunner.gnm1.ann1.8433IQ Arachis hypogaea HOM05D001787 ORTHO05D007379 4.8e-25 118.2 91 62.6
Medtr1g116080 Medicago truncatula HOM05D001787 ORTHO05D007379 4.8e-25 118.2 91 62.6
vmacro07105 Vaccinium macrocarpon HOM05D001787 ORTHO05D007379 4.8e-25 118.2 91 63.7
DCAR_015260 Daucus carota HOM05D001787 ORTHO05D007379 6.3e-25 117.9 91 62.6
CARHR259750 Cardamine hirsuta HOM05D001787 ORTHO05D007379 1.1e-24 117.1 90 60.0
CsaV3_5G006480 Cucumis sativus L. HOM05D001787 ORTHO05D007379 1.1e-24 117.1 135 45.2
AUR62025545 Chenopodium quinoa HOM05D001787 ORTHO05D007379 1.4e-24 116.7 93 61.3
Peaxi162Scf00015g02810 Petunia axillaris HOM05D001787 ORTHO05D007379 1.4e-24 116.7 86 67.4
Potri.008G047100 Populus trichocarpa HOM05D001787 ORTHO05D007379 1.4e-24 116.7 91 61.5
Migut.D01862 Erythranthe guttata HOM05D001787 ORTHO05D007379 1.8e-24 116.3 91 64.8
arahy.Tifrunner.gnm1.ann1.53I6EC Arachis hypogaea HOM05D001787 ORTHO05D007379 2.4e-24 115.9 91 61.5
Cc00_g30860 Coffea canephora HOM05D001787 ORTHO05D007379 2.4e-24 115.9 94 57.4
BcaC04g20922 Brassica carinata HOM05D001787 ORTHO05D007379 3.1e-24 115.5 90 56.7
A09p29950 Brassica napus HOM05D001787 ORTHO05D007379 3.1e-24 115.5 90 56.7
C09p37900 Brassica napus HOM05D001787 ORTHO05D007379 3.1e-24 115.5 90 56.7
BolC9t56623H Brassica oleracea HOM05D001787 ORTHO05D007379 3.1e-24 115.5 90 56.7
BraA09t38558Z Brassica rapa HOM05D001787 ORTHO05D007379 3.1e-24 115.5 90 56.7
MELO3C011712.2 Cucumis melo HOM05D001787 ORTHO05D007379 3.1e-24 115.5 91 61.5
Psat6g239680 Pisum sativum HOM05D001787 ORTHO05D007379 3.1e-24 115.5 91 61.5
Thecc.10G063800 Theobroma cacao HOM05D001787 ORTHO05D007379 3.1e-24 115.5 91 61.5
Ah.10g033150 Amaranthus hybridus HOM05D001787 ORTHO05D007379 4.1e-24 115.2 91 61.5
Duzib128G2020 Durio zibethinus HOM05D001787 ORTHO05D007379 5.3e-24 114.8 93 61.3
Sabra10G0165900 Salix brachista HOM05D001787 ORTHO05D007379 5.3e-24 114.8 91 61.5
Hund19285 Selenicereus undatus HOM05D001787 ORTHO05D007379 5.3e-24 114.8 91 62.6
Atru.chr12.602 Acer truncatum HOM05D001787 ORTHO05D007379 6.9e-24 114.4 91 58.2
AL6G42610 Arabidopsis lyrata HOM05D001787 ORTHO05D007379 6.9e-24 114.4 90 58.9
Carub.0006s2729 Capsella rubella HOM05D001787 ORTHO05D007379 6.9e-24 114.4 90 57.8
CDE04G0577 Ceratophyllum demersum HOM05D001787 ORTHO05D007379 6.9e-24 114.4 89 65.2
COL.COLO4_06779 Corchorus olitorius HOM05D001787 ORTHO05D007379 6.9e-24 114.4 91 61.5
Oeu050632.1 Olea europaea HOM05D001787 ORTHO05D007379 6.9e-24 114.4 90 58.9
PGR142G1002 Punica granatum HOM05D001787 ORTHO05D007379 6.9e-24 114.4 91 61.5
Sabra08G0033300 Salix brachista HOM05D001787 ORTHO05D007379 9.0e-24 114.0 91 60.4
TWI15G0363 Tripterygium wilfordii HOM05D001787 ORTHO05D007379 9.0e-24 114.0 91 58.2
ATR0594G237 Amborella trichopoda HOM05D001787 ORTHO05D007379 1.2e-23 113.6 91 63.7
Aa31LG9G14560 Aethionema arabicum HOM05D002613 ORTHO05D003140 1.5e-23 113.2 90 56.7
AT4G08790 Arabidopsis thaliana HOM05D001787 ORTHO05D007379 1.5e-23 113.2 90 57.8
BcaB01g01360 Brassica carinata HOM05D001787 ORTHO05D007379 1.5e-23 113.2 90 55.6
Duzib114G0848 Durio zibethinus HOM05D001787 ORTHO05D007379 1.5e-23 113.2 91 60.4
Phvul.007G007100 Phaseolus vulgaris HOM05D001787 ORTHO05D007379 1.5e-23 113.2 91 59.3
VMungo0720G0451 Vigna mungo HOM05D001787 ORTHO05D007379 1.5e-23 113.2 91 59.3
Eucgr.G02782 Eucalyptus grandis HOM05D001787 ORTHO05D007379 2.0e-23 112.8 91 60.4
Lalb_Chr06g0164071 Lupinus albus HOM05D001787 ORTHO05D007379 2.6e-23 112.5 91 60.4
Potri.010G214600 Populus trichocarpa HOM05D001787 ORTHO05D007379 2.6e-23 112.5 91 60.4
Sp6g08980 Schrenkiella parvula HOM05D001787 ORTHO05D007379 3.4e-23 112.1 90 55.6
THA.LOC104799365 Tarenaya hassleriana HOM05D001787 ORTHO05D007379 3.4e-23 112.1 90 56.7
CSS0012291 Camellia sinensis var. sinensis HOM05D001787 ORTHO05D007379 5.9e-23 111.3 91 59.3
Cpa.g.sc1.297 Carica papaya HOM05D001787 ORTHO05D007379 1.0e-22 110.5 98 54.1
Gohir.A10G208500 Gossypium hirsutum HOM05D001787 ORTHO05D007379 1.0e-22 110.5 90 58.9
Gohir.D10G216800 Gossypium hirsutum HOM05D001787 ORTHO05D007379 1.0e-22 110.5 90 58.9
Gorai.011G242400 Gossypium raimondii HOM05D001787 ORTHO05D007379 1.0e-22 110.5 90 58.9
Manes.07G105900 Manihot esculenta HOM05D001787 ORTHO05D007379 1.0e-22 110.5 90 60.0
Thhalv10028848m.g Eutrema salsugineum HOM05D001787 ORTHO05D007379 3.8e-22 108.6 90 54.4
SEGI_21249 Sequoiadendron giganteum HOM05D001787 ORTHO05D007379 6.5e-22 107.8 91 59.3
Glyma.10G292900 Glycine max HOM05D001787 ORTHO05D007379 8.5e-22 107.5 91 57.1
unitig_37.g12738 Utricularia gibba HOM05D001787 ORTHO05D007379 1.9e-21 106.3 91 57.1
Mapoly0061s0014 Marchantia polymorpha HOM05D001787 ORTHO05D007379 7.2e-21 104.4 91 56.0
MBI06_g21004_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 3.6e-20 102.1 51 96.1
AUR62044405 Chenopodium quinoa HOM05D001787 ORTHO05D007379 1.0e-19 100.5 90 54.4
Glyma.20G243133 Glycine max HOM05D001787 ORTHO05D007379 2.3e-19 99.4 114 49.1
SGA_v2.0_scaffold7G04090 Striga asiatica HOM05D001961 ORTHO05D002286 3.0e-19 99.0 91 57.1
SalBow3G2882 Salvia bowleyana HOM05D001787 ORTHO05D007379 1.9e-18 96.3 87 50.6
SMO118G0339 Selaginella moellendorffii HOM05D001787 ORTHO05D007379 1.7e-17 93.2 90 52.2
CBR_g21238 Chara braunii HOM05D001787 ORTHO05D007379 2.0e-15 86.3 94 46.8
Hma1.2p1_0207F.1_g088030 Hydrangea macrophylla HOM05D001787 ORTHO05D007379 5.9e-15 84.7 66 60.6
Cre14.g609030 Chlamydomonas reinhardtii HOM05D001787 ORTHO05D007379 7.7e-15 84.3 91 46.2
Lj1C927T7 Lonicera japonica HOM05D001787 ORTHO05D007379 1.0e-14 84.0 48 79.2
PRCOL_00001000 Prasinoderma coloniale HOM05D001787 ORTHO05D007379 1.3e-14 83.6 96 43.8
SalBow2G3358 Salvia bowleyana HOM05D001787 ORTHO05D007379 4.2e-13 78.6 90 44.4
MCO16G130 Micromonas commoda HOM05D001787 ORTHO05D007379 1.4e-11 73.6 88 40.9
SalBow3G3575 Salvia bowleyana HOM05D001787 ORTHO05D007379 3.0e-11 72.4 72 44.4
AUR62043799 Chenopodium quinoa HOM05D001787 ORTHO05D007379 1.3e-09 67.0 45 66.7
MBI15_g21025_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 1.7e-09 66.6 31 93.5
Haze_26272 Corylus avellana HOM05D001787 ORTHO05D007379 5.3e-08 61.6 95 33.7
MBI01_g06190_MAGBIO Magnolia biondii HOM05D000448 ORTHO05D000291 1.0e-06 57.4 43 58.1
MBI17_g30843_MAGBIO Magnolia biondii HOM05D010381 ORTHO05D243972 1.7e-06 56.6 28 82.1


User provided reference genes

Program Settings