Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 5.0e-199 697.6 358 100.0
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 5.9e-131 471.5 359 67.4
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 2.2e-125 453.0 361 66.5
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 1.5e-123 446.8 359 64.6
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 5.9e-123 444.9 364 63.2
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 1.8e-116 423.3 373 61.7
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 4.1e-116 422.2 327 65.4
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 5.0e-114 415.2 327 64.2
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 1.2e-112 410.6 355 59.4
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 1.4e-111 407.1 372 57.3
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 2.3e-111 406.4 325 62.2
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 2.3e-111 406.4 347 60.8
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 3.0e-111 406.0 282 71.6
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 5.2e-111 405.2 310 65.5
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 1.3e-109 400.6 303 65.3
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 1.7e-109 400.2 330 62.4
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 4.8e-109 398.7 316 64.9
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 6.3e-109 398.3 353 58.1
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 8.2e-109 397.9 326 62.6
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 1.1e-108 397.5 331 61.9
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 1.4e-108 397.1 374 57.0
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 4.1e-108 395.6 329 63.8
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 7.0e-108 394.8 328 61.6
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 9.1e-108 394.4 336 60.4
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.7e-107 392.9 336 60.1
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 5.9e-107 391.7 285 68.4
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 5.9e-107 391.7 375 56.5
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 3.8e-106 389.0 335 57.0
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 5.0e-106 388.7 317 61.8
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 8.5e-106 387.9 332 61.1
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 1.1e-105 387.5 321 62.0
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 2.5e-105 386.3 298 66.4
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 2.5e-105 386.3 341 58.9
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 2.5e-105 386.3 334 61.4
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 3.2e-105 386.0 350 61.4
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 7.2e-105 384.8 332 59.0
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 7.2e-105 384.8 348 59.8
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 9.4e-105 384.4 354 57.6
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.2e-104 384.0 355 59.2
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 2.1e-104 383.3 361 57.1
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 2.7e-104 382.9 312 62.2
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 4.7e-104 382.1 355 59.2
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 8.0e-104 381.3 383 55.4
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.4e-103 380.6 364 56.3
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 1.4e-103 380.6 325 59.7
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 2.3e-103 379.8 311 61.7
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 2.3e-103 379.8 311 61.7
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.3e-103 379.8 341 61.0
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 3.0e-103 379.4 332 60.5
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 6.8e-103 378.3 328 60.1
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 1.5e-102 377.1 339 56.0
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 1.5e-102 377.1 367 54.5
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 2.6e-102 376.3 354 56.2
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 4.4e-102 375.6 347 57.1
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 4.4e-102 375.6 338 57.7
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.2e-101 373.2 362 55.2
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.8e-101 372.9 289 64.4
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 2.8e-101 372.9 367 54.8
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 6.3e-101 371.7 291 62.5
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 1.4e-100 370.5 367 54.0
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 1.8e-100 370.2 287 62.4
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 3.1e-100 369.4 316 60.8
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 4.1e-100 369.0 367 54.5
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 5.4e-100 368.6 312 60.9
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 5.4e-100 368.6 307 60.9
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 7.0e-100 368.2 353 55.0
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 1.2e-99 367.5 307 60.9
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.2e-99 367.5 304 61.5
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 2.0e-99 366.7 316 60.1
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 2.9e-98 362.8 309 59.5
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 4.2e-97 359.0 313 59.4
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 1.6e-96 357.1 352 54.0
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 2.8e-96 356.3 315 56.8
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 8.0e-96 354.8 332 53.3
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 1.0e-95 354.4 363 53.2
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 1.8e-95 353.6 310 56.8
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 1.8e-95 353.6 337 54.3
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 3.0e-95 352.8 313 57.5
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 1.5e-94 350.5 284 63.0
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 7.5e-94 348.2 343 51.9
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 7.5e-94 348.2 367 51.8
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 1.8e-92 343.6 316 55.4
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 1.8e-92 343.6 316 55.4
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 7.0e-92 341.7 281 60.9
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 5.9e-91 338.6 312 56.1
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 1.3e-90 337.4 255 69.0
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 1.6e-88 330.5 316 53.2
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 4.0e-87 325.9 263 61.2
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 5.2e-87 325.5 368 48.1
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 2.0e-83 313.5 291 56.0
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 5.0e-82 308.9 356 47.5
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 1.5e-81 307.4 289 58.1
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 9.5e-81 304.7 231 66.2
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 2.1e-80 303.5 353 47.3
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 1.6e-75 287.3 287 53.0
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 8.1e-72 275.0 321 49.2
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 2.6e-70 270.0 291 50.2
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 1.1e-65 254.6 309 45.3
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 3.2e-60 236.5 300 44.3
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 4.2e-60 236.1 232 50.4
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 1.6e-59 234.2 337 45.4
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 1.0e-58 231.5 337 45.4
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 1.3e-58 231.1 342 43.9
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 1.1e-57 228.0 214 52.8
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 1.5e-57 227.6 237 54.0
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 7.3e-57 225.3 246 53.7
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 9.6e-57 224.9 189 62.4
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 2.6e-54 216.9 193 59.1
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 2.2e-53 213.8 211 56.9
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 2.2e-53 213.8 293 41.6
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 4.6e-51 206.1 168 61.3
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 6.0e-43 179.1 314 38.9
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 1.3e-40 171.4 119 63.9
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.6e-40 171.0 166 52.4
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 1.1e-39 168.3 335 35.8
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 4.0e-39 166.4 285 37.2
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 9.0e-39 165.2 114 69.3
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 1.9e-36 157.5 112 67.0
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 2.1e-35 154.1 135 62.2
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 1.9e-33 147.5 130 53.1
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 4.5e-30 136.3 168 47.0
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 4.9e-29 132.9 128 55.5
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 5.9e-22 109.4 223 33.2
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 1.1e-20 105.1 115 48.7
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 8.8e-18 95.5 71 60.6
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 2.0e-17 94.4 56 73.2
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 2.5e-17 94.0 63 68.3
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 7.4e-17 92.4 53 75.5
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 2.8e-16 90.5 69 60.9
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.4e-15 87.4 63 61.9
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 3.1e-15 87.0 68 61.8
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 5.9e-14 82.8 53 66.0
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 5.0e-13 79.7 74 52.7
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 9.4e-12 75.5 96 35.4
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 3.7e-08 63.5 64 48.4
RcHm_v2.0_Chr4g0418411 Rosa chinensis HOM05D005912 ORTHO05D007329 7.7e-06 55.8 68 44.1


User provided reference genes

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