Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g37572_MAGBIO Magnolia biondii HOM05D000931 ORTHO05D002226 4.7e-82 307.8 150 100.0
MBI08_g43048_MAGBIO Magnolia biondii HOM05D000931 ORTHO05D002226 1.3e-18 97.1 168 41.1
MBI08_g44328_MAGBIO Magnolia biondii HOM05D000931 ORTHO05D002226 6.5e-15 84.7 46 87.0
MBI08_g44329_MAGBIO Magnolia biondii HOM05D000931 ORTHO05D002226 2.4e-09 66.2 45 68.9
Sc03g0003920 Simmondsia chinensis HOM05D000931 ORTHO05D002226 7.7e-08 61.2 33 78.8
QL09p038412 Quercus lobata HOM05D000931 ORTHO05D002226 3.8e-07 58.9 50 58.0
Haze_24615 Corylus avellana HOM05D000931 ORTHO05D002226 6.5e-07 58.2 45 57.8
Rhsim01G0265100 Rhododendron simsii HOM05D003708 ORTHO05D004452 6.5e-07 58.2 50 54.0
CSS0032284 Camellia sinensis var. sinensis HOM05D000931 ORTHO05D002226 8.5e-07 57.8 50 56.0
FAN10G1755 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.1e-06 57.4 50 54.0
Nitab4.5_0005845g0020 Nicotiana tabacum HOM05D000931 ORTHO05D002226 1.1e-06 57.4 50 56.0
Dinv34615 Davidia involucrata HOM05D000931 ORTHO05D002226 1.4e-06 57.0 50 54.0
PGSC0003DMG400015794 Solanum tuberosum HOM05D000931 ORTHO05D002226 1.4e-06 57.0 50 56.0
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 1.9e-06 56.6 30 83.3
CAN.G307.28 Capsicum annuum HOM05D000931 ORTHO05D002226 1.9e-06 56.6 50 56.0
Lsat_1_v5_gn_8_112280 Lactuca sativa HOM05D000931 ORTHO05D002226 1.9e-06 56.6 32 75.0
Manes.01G154700 Manihot esculenta HOM05D000931 ORTHO05D002226 1.9e-06 56.6 30 83.3
Nitab4.5_0000084g0020 Nicotiana tabacum HOM05D000931 ORTHO05D002226 1.9e-06 56.6 50 56.0
Prupe.8G224900 Prunus persica HOM05D000931 ORTHO05D002226 1.9e-06 56.6 33 72.7
TWI18G0379 Tripterygium wilfordii HOM05D000931 ORTHO05D002226 1.9e-06 56.6 33 72.7
FvH4_2g21620 Fragaria vesca HOM05D000931 ORTHO05D002226 2.5e-06 56.2 50 52.0
FvH4_7g34231 Fragaria vesca HOM05D000931 ORTHO05D002226 2.5e-06 56.2 50 52.0
FAN15G2803 Fragaria x ananassa HOM05D000931 ORTHO05D002226 2.5e-06 56.2 50 52.0
FAN24G2423 Fragaria x ananassa HOM05D000931 ORTHO05D002226 2.5e-06 56.2 50 52.0
Manes.17G004100 Manihot esculenta HOM05D000931 ORTHO05D002226 2.5e-06 56.2 30 80.0
Solyc03g025560.4 Solanum lycopersicum HOM05D000931 ORTHO05D002226 2.5e-06 56.2 50 54.0
Sopen03g004400 Solanum pennellii HOM05D000931 ORTHO05D002226 2.5e-06 56.2 50 54.0
TWI12G1477 Tripterygium wilfordii HOM05D000931 ORTHO05D002226 2.5e-06 56.2 33 72.7
vmacro14835 Vaccinium macrocarpon HOM05D000931 ORTHO05D002226 2.5e-06 56.2 33 72.7
Cfa002417 Carpinus fangiana HOM05D000931 ORTHO05D002226 3.2e-06 55.8 33 72.7
Sc05g0000720 Simmondsia chinensis HOM05D000931 ORTHO05D002226 3.2e-06 55.8 50 54.0
CSS0002140 Camellia sinensis var. sinensis HOM05D000931 ORTHO05D002226 4.2e-06 55.5 33 72.7
CAN.G4348.1 Capsicum annuum HOM05D000931 ORTHO05D002226 4.2e-06 55.5 50 56.0
CAN.G479.48 Capsicum annuum HOM05D000931 ORTHO05D002226 4.2e-06 55.5 50 56.0
FAN27G0107 Fragaria x ananassa HOM05D000931 ORTHO05D002226 4.2e-06 55.5 33 69.7
Nn5g30974 Nelumbo nucifera HOM05D000931 ORTHO05D002226 4.2e-06 55.5 29 82.8
Peaxi162Scf00244g00071 Petunia axillaris HOM05D000931 ORTHO05D002226 4.2e-06 55.5 50 54.0
Aqoxy6G01636 Aquilegia oxysepala HOM05D000931 ORTHO05D002226 5.5e-06 55.1 30 80.0
Ciclev10025904m.g Citrus clementina HOM05D000931 ORTHO05D002226 5.5e-06 55.1 33 75.8
Cc00_g03060 Coffea canephora HOM05D000931 ORTHO05D002226 5.5e-06 55.1 30 80.0
MELO3C018615.2 Cucumis melo HOM05D000931 ORTHO05D002226 5.5e-06 55.1 33 72.7
CsaV3_7G006800 Cucumis sativus L. HOM05D000931 ORTHO05D002226 5.5e-06 55.1 33 72.7
Peaxi162Scf01051g00139 Petunia axillaris HOM05D000931 ORTHO05D002226 5.5e-06 55.1 39 66.7
Prupe.1G067500 Prunus persica HOM05D000931 ORTHO05D002226 5.5e-06 55.1 33 69.7
Sed0019701 Sechium edule HOM05D000931 ORTHO05D002226 5.5e-06 55.1 30 76.7
TAR376G0627 Trochodendron aralioides HOM05D000046 ORTHO05D002226 5.5e-06 55.1 38 63.2
ClCG09G016170 Citrullus lanatus HOM05D000931 ORTHO05D002226 7.2e-06 54.7 33 69.7
ECA238G4736 Erigeron canadensis HOM05D000931 ORTHO05D002226 7.2e-06 54.7 32 71.9
Oeu012547.1 Olea europaea HOM05D000931 ORTHO05D002226 7.2e-06 54.7 30 76.7
RcHm_v2.0_Chr6g0288291 Rosa chinensis HOM05D000931 ORTHO05D002226 7.2e-06 54.7 50 50.0
TAR625G0158 Trochodendron aralioides HOM05D000931 ORTHO05D002226 7.2e-06 54.7 32 71.9
AUR62009987 Chenopodium quinoa HOM05D000931 ORTHO05D002226 9.4e-06 54.3 33 69.7
AUR62024723 Chenopodium quinoa HOM05D000931 ORTHO05D002226 9.4e-06 54.3 33 69.7
FAN20G1518 Fragaria x ananassa HOM05D000931 ORTHO05D002226 9.4e-06 54.3 33 66.7
Gohir.D11G136000 Gossypium hirsutum HOM05D000931 ORTHO05D002226 9.4e-06 54.3 50 50.0
Gorai.007G145600 Gossypium raimondii HOM05D000931 ORTHO05D002226 9.4e-06 54.3 50 50.0
HanXRQChr14g0442491 Helianthus annuus HOM05D000931 ORTHO05D002226 9.4e-06 54.3 32 71.9
Lj2C497T11 Lonicera japonica HOM05D000434 ORTHO05D002226 9.4e-06 54.3 33 69.7


User provided reference genes

Program Settings