Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.5e-68 262.7 128 100.0
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.0e-26 120.9 91 68.1
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 5.9e-25 117.9 71 80.3
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-24 117.1 129 51.2
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-24 117.1 129 51.2
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-24 117.1 129 51.2
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-24 117.1 129 51.2
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-24 117.1 129 51.2
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-24 117.1 129 51.2
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-24 117.1 129 51.2
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.6e-22 109.8 84 65.5
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 3.0e-21 105.5 55 92.7
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.5e-20 103.2 84 60.7
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 2.8e-19 99.0 86 58.1
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 2.8e-19 99.0 86 58.1
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 3.7e-19 98.6 63 74.6
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 4.8e-19 98.2 90 62.2
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 4.8e-19 98.2 90 62.2
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-19 98.2 86 57.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 6.3e-19 97.8 86 58.1
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.2e-19 97.4 85 57.6
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 1.8e-18 96.3 89 56.2
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 9.1e-18 94.0 83 56.6
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 9.1e-18 94.0 83 56.6
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.6e-17 92.4 110 47.3
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 1.0e-16 90.5 83 54.2
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 5.0e-16 88.2 92 55.4
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 5.0e-16 88.2 92 55.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.5e-15 85.9 89 47.2
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.2e-15 85.1 92 54.3
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 9.4e-15 84.0 72 55.6
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 1.2e-14 83.6 112 47.3
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.1e-14 82.8 78 56.4
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 1.8e-13 79.7 84 46.4
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 2.3e-13 79.3 88 48.9
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.6e-12 75.9 69 52.2
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.6e-12 75.9 69 52.2
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 1.3e-11 73.6 109 39.4
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 5.4e-10 68.2 84 42.9
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 5.4e-10 68.2 84 42.9
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 5.4e-10 68.2 84 42.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 5.4e-10 68.2 84 42.9
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 5.9e-09 64.7 73 43.8
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-08 63.5 43 69.8
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-08 63.5 43 69.8
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.5e-07 59.3 85 48.2
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.7e-06 55.1 38 68.4
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 8.0e-06 54.3 44 61.4
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.0e-06 54.3 42 61.9


User provided reference genes

Program Settings