Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g35872_MAGBIO Magnolia biondii HOM05D004334 ORTHO05D004763 6.2e-222 773.9 403 100.0
TAR376G1081 Trochodendron aralioides HOM05D004334 ORTHO05D004763 2.0e-95 353.6 349 54.2
MBI05_g39718_MAGBIO Magnolia biondii HOM05D004334 ORTHO05D004763 5.5e-93 345.5 345 56.8
Nn6g31831 Nelumbo nucifera HOM05D004334 ORTHO05D004763 3.0e-91 339.7 351 55.3
Haze_03684 Corylus avellana HOM05D004334 ORTHO05D004763 1.9e-90 337.0 342 57.3
CiPaw.08G179800 Carya illinoinensis HOM05D004334 ORTHO05D004763 5.3e-88 328.9 350 53.4
CSS0027377 Camellia sinensis var. sinensis HOM05D004334 ORTHO05D004763 1.8e-83 313.9 340 52.9
CSS0049695 Camellia sinensis var. sinensis HOM05D004334 ORTHO05D004763 1.8e-83 313.9 339 51.9
Aqoxy6G01836 Aquilegia oxysepala HOM05D004334 ORTHO05D004763 2.3e-83 313.5 350 50.3
TWI73G1167 Tripterygium wilfordii HOM05D004334 ORTHO05D004763 1.5e-82 310.8 344 52.9
Rhsim08G0028900 Rhododendron simsii HOM05D004334 ORTHO05D004763 1.3e-81 307.8 364 48.6
Cc07_g11490 Coffea canephora HOM05D004334 ORTHO05D004763 1.8e-80 303.9 341 49.9
Gorai.003G004400 Gossypium raimondii HOM05D004334 ORTHO05D004763 5.3e-80 302.4 349 51.9
CiPaw.07G005200 Carya illinoinensis HOM05D004334 ORTHO05D004763 6.9e-80 302.0 350 52.0
Actinidia17393 Actinidia chinensis HOM05D004334 ORTHO05D004763 1.2e-79 301.2 335 53.7
Gohir.D03G004200 Gossypium hirsutum HOM05D004334 ORTHO05D004763 1.2e-79 301.2 349 51.9
Cfa007045 Carpinus fangiana HOM05D004334 ORTHO05D004763 3.4e-79 299.7 331 54.7
Hma1.2p1_0315F.1_g122750 Hydrangea macrophylla HOM05D004334 ORTHO05D004763 4.5e-79 299.3 346 50.6
Gorai.007G189900 Gossypium raimondii HOM05D004334 ORTHO05D004763 7.7e-79 298.5 353 50.1
FvH4_1g10780 Fragaria vesca HOM05D004334 ORTHO05D004763 1.3e-78 297.7 365 49.3
Thecc.01G009500 Theobroma cacao HOM05D004334 ORTHO05D004763 2.9e-78 296.6 348 51.4
MD15G1235400 Malus domestica HOM05D004334 ORTHO05D004763 2.5e-77 293.5 350 49.1
vmacro18446 Vaccinium macrocarpon HOM05D004334 ORTHO05D004763 2.5e-77 293.5 336 49.1
FAN19G0005 Fragaria x ananassa HOM05D004334 ORTHO05D004763 3.2e-77 293.1 342 53.8
Gohir.D11G178000 Gossypium hirsutum HOM05D004334 ORTHO05D004763 4.2e-77 292.7 352 49.7
Nn5g30900 Nelumbo nucifera HOM05D004334 ORTHO05D004763 4.2e-77 292.7 329 52.3
ClCG01G020710 Citrullus lanatus HOM05D004334 ORTHO05D004763 5.5e-77 292.4 358 50.3
Prupe.7G177700 Prunus persica HOM05D004334 ORTHO05D004763 7.2e-77 292.0 364 48.1
Ciclev10025980m.g Citrus clementina HOM05D004334 ORTHO05D004763 1.2e-76 291.2 347 49.6
Lj2g0016931 Lotus japonicus HOM05D004334 ORTHO05D004763 2.1e-76 290.4 348 49.1
Oeu012549.1 Olea europaea HOM05D004334 ORTHO05D004763 2.7e-76 290.0 341 47.2
Phvul.002G112900 Phaseolus vulgaris HOM05D004334 ORTHO05D004763 4.7e-76 289.3 351 50.1
Ca_24954_v3 Cicer arietinum L. HOM05D004334 ORTHO05D004763 6.1e-76 288.9 350 49.4
RcHm_v2.0_Chr2g0097961 Rosa chinensis HOM05D004334 ORTHO05D004763 7.9e-76 288.5 350 49.4
Gohir.A11G171000 Gossypium hirsutum HOM05D004334 ORTHO05D004763 1.4e-75 287.7 348 49.7
Medtr5g023230 Medicago truncatula HOM05D004334 ORTHO05D004763 6.7e-75 285.4 349 49.3
MD02G1121800 Malus domestica HOM05D004334 ORTHO05D004763 2.6e-74 283.5 350 50.3
Manes.03G080400 Manihot esculenta HOM05D004334 ORTHO05D004763 3.3e-74 283.1 334 50.6
ATR0661G230 Amborella trichopoda HOM05D004334 ORTHO05D004763 7.4e-74 282.0 345 47.2
Potri.005G104700 Populus trichocarpa HOM05D004334 ORTHO05D004763 7.4e-74 282.0 331 52.0
Sabra05G0086000 Salix brachista HOM05D004334 ORTHO05D004763 1.3e-73 281.2 420 45.2
Gohir.A02G175700 Gossypium hirsutum HOM05D004334 ORTHO05D004763 2.2e-73 280.4 333 52.0
CAN.G890.9 Capsicum annuum HOM05D004334 ORTHO05D004763 3.7e-73 279.6 331 51.1
Lsat_1_v5_gn_4_143501 Lactuca sativa HOM05D004334 ORTHO05D004763 3.7e-73 279.6 349 48.7
arahy.Tifrunner.gnm1.ann1.R6TSSQ Arachis hypogaea HOM05D004334 ORTHO05D004763 6.3e-73 278.9 392 43.1
Oeu039717.1 Olea europaea HOM05D004334 ORTHO05D004763 6.3e-73 278.9 341 48.4
Migut.H02192 Erythranthe guttata HOM05D004334 ORTHO05D004763 1.4e-72 277.7 340 50.0
Eucgr.I02283 Eucalyptus grandis HOM05D004334 ORTHO05D004763 1.4e-72 277.7 346 48.6
Sopen02g027910 Solanum pennellii HOM05D004334 ORTHO05D004763 2.4e-72 276.9 341 50.4
Solyc02g083150.3 Solanum lycopersicum HOM05D004334 ORTHO05D004763 6.9e-72 275.4 334 50.9
PGSC0003DMG400001577 Solanum tuberosum HOM05D004334 ORTHO05D004763 9.1e-72 275.0 333 51.1
Lalb_Chr05g0212061 Lupinus albus HOM05D004334 ORTHO05D004763 1.2e-71 274.6 353 48.4
Atru.chr3.934 Acer truncatum HOM05D004334 ORTHO05D004763 3.4e-71 273.1 332 49.4
MSTRG.2739 Avicennia marina HOM05D004334 ORTHO05D004763 3.4e-71 273.1 343 50.4
Glyma.11G082600 Glycine max HOM05D004334 ORTHO05D004763 3.4e-71 273.1 348 48.0
PSO675G0891 Papaver somniferum HOM05D004334 ORTHO05D004763 1.0e-70 271.6 349 44.4
ECA232G0620 Erigeron canadensis HOM05D003302 ORTHO05D003785 2.2e-70 270.4 337 47.5
CAN.G23.17 Capsicum annuum HOM05D004334 ORTHO05D004763 2.9e-70 270.0 332 50.0
TPR.G25124 Trifolium pratense HOM05D004334 ORTHO05D004763 5.0e-70 269.2 349 47.3
PSO541G2607 Papaver somniferum HOM05D004334 ORTHO05D004763 1.1e-69 268.1 349 43.8
arahy.Tifrunner.gnm1.ann1.106C79 Arachis hypogaea HOM05D004334 ORTHO05D004763 1.4e-69 267.7 326 45.4
FAN23G2490 Fragaria x ananassa HOM05D004334 ORTHO05D004763 1.9e-69 267.3 357 47.9
Solyc02g061810.3 Solanum lycopersicum HOM05D004334 ORTHO05D004763 8.0e-68 261.9 329 48.3
CsaV3_6G047640 Cucumis sativus L. HOM05D004334 ORTHO05D004763 3.0e-67 260.0 348 47.7
Peaxi162Scf00300g00517 Petunia axillaris HOM05D004334 ORTHO05D004763 3.0e-67 260.0 324 51.2
PGR119G0893 Punica granatum HOM05D004334 ORTHO05D004763 8.8e-67 258.5 326 50.3
HanXRQChr09g0256961 Helianthus annuus HOM05D004334 ORTHO05D004763 1.5e-66 257.7 349 47.3
MELO3C007955.2 Cucumis melo HOM05D004334 ORTHO05D004763 2.0e-66 257.3 348 46.6
Lalb_Chr09g0321381 Lupinus albus HOM05D002155 ORTHO05D004763 9.7e-66 255.0 327 47.7
Nitab4.5_0004994g0030 Nicotiana tabacum HOM05D004334 ORTHO05D004763 2.2e-65 253.8 341 46.9
Sopen02g012850 Solanum pennellii HOM05D004334 ORTHO05D004763 3.7e-65 253.1 326 47.5
DCAR_011587 Daucus carota HOM05D004334 ORTHO05D004763 8.2e-65 251.9 328 47.9
FAN09G1010 Fragaria x ananassa HOM05D004334 ORTHO05D004763 4.5e-63 246.1 364 42.3
FAN09G3278 Fragaria x ananassa HOM05D004334 ORTHO05D004763 4.5e-63 246.1 364 42.3
Eucgr.J02517 Eucalyptus grandis HOM05D004334 ORTHO05D004763 2.9e-62 243.4 340 47.6
TWI53G1416 Tripterygium wilfordii HOM05D004334 ORTHO05D004763 3.8e-62 243.0 344 46.5
PGR102G0214 Punica granatum HOM05D004334 ORTHO05D004763 8.5e-62 241.9 338 45.6
FAN05G4181 Fragaria x ananassa HOM05D004334 ORTHO05D004763 2.5e-61 240.4 364 42.6
Actinidia02363 Actinidia chinensis HOM05D004334 ORTHO05D004763 7.2e-61 238.8 284 50.4
FvH4_6g14950 Fragaria vesca HOM05D004334 ORTHO05D004763 1.2e-60 238.0 364 43.7
FAN14G2747 Fragaria x ananassa HOM05D004334 ORTHO05D004763 2.1e-60 237.3 364 43.7
Dinv08539 Davidia involucrata HOM05D004334 ORTHO05D004763 3.6e-60 236.5 298 50.7
THA.LOC104821351 Tarenaya hassleriana HOM05D004334 ORTHO05D004763 8.0e-60 235.3 335 46.0
CSS0034111 Camellia sinensis var. sinensis HOM05D004334 ORTHO05D004763 1.8e-59 234.2 296 48.0
Potri.007G060100 Populus trichocarpa HOM05D004334 ORTHO05D004763 1.8e-59 234.2 338 43.8
Carub.0005s1777 Capsella rubella HOM05D004334 ORTHO05D004763 8.8e-59 231.9 346 43.4
Thhalv10010516m.g Eutrema salsugineum HOM05D004334 ORTHO05D004763 1.3e-57 228.0 345 43.8
SGA_v2.0_scaffold108G30985 Striga asiatica HOM05D004334 ORTHO05D004763 3.7e-57 226.5 326 45.4
AT3G51390 Arabidopsis thaliana HOM05D004334 ORTHO05D004763 1.1e-56 224.9 344 42.2
EL10Ac6g13347 Beta vulgaris HOM05D004334 ORTHO05D004763 7.0e-56 222.2 347 41.2
HanXRQChr15g0487491 Helianthus annuus HOM05D004334 ORTHO05D004763 1.6e-55 221.1 333 44.1
CDE02G4661 Ceratophyllum demersum HOM05D004334 ORTHO05D004763 2.0e-55 220.7 327 43.4
AL5G31840 Arabidopsis lyrata HOM05D004334 ORTHO05D004763 2.7e-55 220.3 344 42.4
Duzib147G0009 Durio zibethinus HOM05D004334 ORTHO05D004763 1.9e-53 214.2 280 50.0
Os12g0480000 Oryza sativa ssp. japonica HOM05D004334 ORTHO05D004763 1.9e-53 214.2 319 41.4
A09p44490 Brassica napus HOM05D004334 ORTHO05D004763 3.2e-53 213.4 349 40.7
BraA09t39907Z Brassica rapa HOM05D004334 ORTHO05D004763 3.2e-53 213.4 349 40.7
CARHR160990 Cardamine hirsuta HOM05D004334 ORTHO05D004763 3.2e-53 213.4 342 41.2
SalBow3G0047 Salvia bowleyana HOM05D004334 ORTHO05D004763 4.2e-53 213.0 340 42.4
Ah.02g129060 Amaranthus hybridus HOM05D004334 ORTHO05D004763 1.2e-52 211.5 320 45.3
BcaB01g00520 Brassica carinata HOM05D004334 ORTHO05D004763 3.6e-52 209.9 347 40.9
Nitab4.5_0000188g0270 Nicotiana tabacum HOM05D004334 ORTHO05D004763 3.0e-51 206.8 283 49.1
BolC8t50281H Brassica oleracea HOM05D004334 ORTHO05D004763 4.0e-51 206.5 349 40.1
C08p26670 Brassica napus HOM05D004334 ORTHO05D004763 3.4e-50 203.4 348 39.9
Sp5g10830 Schrenkiella parvula HOM05D004334 ORTHO05D004763 3.4e-50 203.4 346 40.8
Dinv40159 Davidia involucrata HOM05D004334 ORTHO05D004763 4.4e-50 203.0 163 60.1
BcaNung00388 Brassica carinata HOM05D004334 ORTHO05D004763 2.4e-48 197.2 329 41.0
unitig_27.g25346 Utricularia gibba HOM05D004334 ORTHO05D004763 9.1e-48 195.3 312 40.4
unitig_699.g19572 Utricularia gibba HOM05D004334 ORTHO05D004763 9.1e-48 195.3 301 41.5
BraA01t02255Z Brassica rapa HOM05D004334 ORTHO05D004763 2.7e-47 193.7 341 40.5
QL06p052479 Quercus lobata HOM05D004334 ORTHO05D004763 2.9e-46 190.3 160 58.1
SGA_v2.0_scaffold2G00960 Striga asiatica HOM05D004334 ORTHO05D004763 5.0e-46 189.5 319 41.4
Hund03662 Selenicereus undatus HOM05D004334 ORTHO05D004763 1.1e-45 188.3 389 36.2
VMungo1215G1979 Vigna mungo HOM05D004334 ORTHO05D004763 3.3e-45 186.8 228 46.9
Os04g0562000 Oryza sativa ssp. japonica HOM05D004334 ORTHO05D004763 9.5e-45 185.3 347 35.7
AUR62026202 Chenopodium quinoa HOM05D004334 ORTHO05D004763 3.6e-44 183.3 209 50.7
AUR62026391 Chenopodium quinoa HOM05D004334 ORTHO05D004763 4.0e-43 179.9 210 50.0
Lj4A228G17 Lonicera japonica HOM05D004334 ORTHO05D004763 1.2e-42 178.3 227 53.3
FAN26G1367 Fragaria x ananassa HOM05D004334 ORTHO05D004763 9.8e-42 175.3 196 51.5
arahy.Tifrunner.gnm1.ann1.65IKEQ Arachis hypogaea HOM05D004334 ORTHO05D004763 1.7e-41 174.5 163 50.9
Nitab4.5_0005413g0010 Nicotiana tabacum HOM05D004334 ORTHO05D004763 4.9e-41 172.9 280 43.2
Sc03g0003810 Simmondsia chinensis HOM05D004334 ORTHO05D004763 1.1e-40 171.8 162 55.6
Potri.005G104800 Populus trichocarpa HOM05D004334 ORTHO05D004763 3.1e-40 170.2 144 59.7
Peaxi162Scf00439g00007 Petunia axillaris HOM05D004334 ORTHO05D004763 2.7e-39 167.2 274 43.1
arahy.Tifrunner.gnm1.ann1.5JBS04 Arachis hypogaea HOM05D004334 ORTHO05D004763 4.5e-39 166.4 163 50.3
Psat2g151080 Pisum sativum HOM05D004334 ORTHO05D004763 9.5e-37 158.7 163 49.7
Sed0027006 Sechium edule HOM05D004334 ORTHO05D004763 2.0e-34 151.0 145 54.5
FAN28G1575 Fragaria x ananassa HOM05D004334 ORTHO05D004763 2.2e-33 147.5 140 60.0
QL06p052483 Quercus lobata HOM05D004334 ORTHO05D004763 3.7e-33 146.7 105 69.5
FAN26G3296 Fragaria x ananassa HOM05D004334 ORTHO05D004763 5.4e-32 142.9 146 56.2
Nitab4.5_0001310g0110 Nicotiana tabacum HOM05D004334 ORTHO05D004763 9.2e-32 142.1 81 79.0
FAN02G4027 Fragaria x ananassa HOM05D004334 ORTHO05D004763 2.0e-31 141.0 167 46.1
Ah.03g134170 Amaranthus hybridus HOM05D004334 ORTHO05D004763 6.0e-31 139.4 210 43.8
Sabra07G0050700 Salix brachista HOM05D004334 ORTHO05D004763 3.9e-30 136.7 198 47.0
HPP92_022390 Vanilla planifolia HOM05D004334 ORTHO05D004763 5.6e-29 132.9 143 50.3
SEGI_01463 Sequoiadendron giganteum HOM05D004334 ORTHO05D004763 3.6e-28 130.2 102 67.6
Zm00001eb250140 Zea mays HOM05D004334 ORTHO05D004763 1.5e-26 124.8 106 55.7
Zm00001eb187020 Zea mays HOM05D004334 ORTHO05D004763 4.4e-26 123.2 106 59.4
C01p29130 Brassica napus HOM05D004334 ORTHO05D004763 1.7e-25 121.3 262 36.6
BcaNung05551 Brassica carinata HOM05D004334 ORTHO05D004763 2.2e-25 120.9 82 64.6
Pp3c11_17220 Physcomitrium patens HOM05D004334 ORTHO05D004763 1.1e-24 118.6 348 29.0
A01p23480 Brassica napus HOM05D004334 ORTHO05D004763 4.1e-24 116.7 82 62.2
Lsat_1_v5_gn_2_75001 Lactuca sativa HOM05D004334 ORTHO05D004763 1.2e-23 115.2 327 29.7
BcaC09g50093 Brassica carinata HOM05D004334 ORTHO05D004763 1.6e-23 114.8 303 35.0
Cpa.g.sc6.335 Carica papaya HOM05D004334 ORTHO05D004763 1.6e-23 114.8 163 38.0
Pp3c2_20610 Physcomitrium patens HOM05D004334 ORTHO05D004763 1.6e-23 114.8 350 30.0
Mapoly0218s0003 Marchantia polymorpha HOM05D004334 ORTHO05D004763 4.6e-23 113.2 346 26.9
BolC1t02844H Brassica oleracea HOM05D004334 ORTHO05D004763 3.3e-21 107.1 296 34.5
QL10p037295 Quercus lobata HOM05D004334 ORTHO05D004763 1.1e-19 102.1 103 53.4
MBI08_g09580_MAGBIO Magnolia biondii HOM05D004334 ORTHO05D004763 5.8e-18 96.3 66 68.2
Pp3c1_15780 Physcomitrium patens HOM05D004334 ORTHO05D004763 1.1e-16 92.0 340 28.8
PGSC0003DMG402008678 Solanum tuberosum HOM05D004334 ORTHO05D004763 4.1e-16 90.1 60 70.0
SEGI_05177 Sequoiadendron giganteum HOM05D004334 ORTHO05D004763 7.1e-16 89.4 125 40.0
Sabra07G0050800 Salix brachista HOM05D004334 ORTHO05D004763 1.6e-15 88.2 116 44.0
SMO347G0399 Selaginella moellendorffii HOM05D004334 ORTHO05D004763 6.0e-15 86.3 311 27.0
Actinidia22928 Actinidia chinensis HOM05D004334 ORTHO05D004763 1.5e-13 81.6 78 56.4
COL.COLO4_22515 Corchorus olitorius HOM05D004334 ORTHO05D004763 2.8e-12 77.4 141 49.6
AagrBONN_evm.TU.Sc2ySwM_117.683 Anthoceros agrestis HOM05D000571 ORTHO05D004763 4.4e-10 70.1 322 24.8
PRCOL_00005340 Prasinoderma coloniale HOM05D004334 ORTHO05D004763 8.4e-09 65.9 120 34.2
MCO11G403 Micromonas commoda HOM05D000571 ORTHO05D004763 6.0e-07 59.7 48 52.1
Nitab4.5_0001310g0100 Nicotiana tabacum HOM05D004334 ORTHO05D004763 7.8e-07 59.3 49 63.3
PGSC0003DMG403008678 Solanum tuberosum HOM05D004334 ORTHO05D004763 3.9e-06 57.0 63 47.6
SEGI_40282 Sequoiadendron giganteum HOM05D004334 ORTHO05D004763 8.7e-06 55.8 88 43.2


User provided reference genes

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