Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g35501_MAGBIO Magnolia biondii HOM05D018976 ORTHO05D241015 3.1e-156 555.1 277 100.0
MBI02_g27637_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D006595 7.3e-12 75.5 71 54.9
Nn3g21035 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.3e-10 70.5 53 56.6
CsaV3_4G032880 Cucumis sativus L. HOM05D000054 ORTHO05D000171 3.0e-10 70.1 53 54.7
Manes.03G092000 Manihot esculenta HOM05D000054 ORTHO05D000171 3.0e-10 70.1 92 42.4
ClCG11G017240 Citrullus lanatus HOM05D000054 ORTHO05D000171 5.2e-10 69.3 53 52.8
MELO3C025663.2 Cucumis melo HOM05D000054 ORTHO05D000171 6.8e-10 68.9 53 52.8
SalBow8G5393 Salvia bowleyana HOM05D000054 ORTHO05D000171 6.8e-10 68.9 53 56.6
Sed0026880 Sechium edule HOM05D000054 ORTHO05D000171 8.9e-10 68.6 95 36.8
Nn3g21036 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.5e-09 67.8 53 58.5
GSVIVG01014128001 Vitis vinifera HOM05D000054 ORTHO05D000171 1.5e-09 67.8 92 41.3
CSS0033311 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 2.0e-09 67.4 52 55.8
Nn3g21030 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.6e-09 67.0 50 60.0
Migut.M00700 Erythranthe guttata HOM05D000054 ORTHO05D000171 3.4e-09 66.6 55 56.4
Migut.M00697 Erythranthe guttata HOM05D000054 ORTHO05D000171 4.4e-09 66.2 56 53.6
TAR627G0098 Trochodendron aralioides HOM05D000054 ORTHO05D000171 5.7e-09 65.9 95 40.0
MBI09_g43479_MAGBIO Magnolia biondii HOM05D018976 ORTHO05D006421 9.8e-09 65.1 107 45.8
Gohir.A11G288400 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.3e-08 64.7 53 54.7
TAR627G1041 Trochodendron aralioides HOM05D000054 ORTHO05D000171 1.3e-08 64.7 89 41.6
Dinv18389 Davidia involucrata HOM05D000054 ORTHO05D000171 1.7e-08 64.3 53 52.8
DCAR_021036 Daucus carota HOM05D000054 ORTHO05D002584 2.2e-08 63.9 49 57.1
Duzib268G0799 Durio zibethinus HOM05D000054 ORTHO05D000171 2.2e-08 63.9 59 49.2
Gohir.D11G304200 Gossypium hirsutum HOM05D000054 ORTHO05D000171 2.2e-08 63.9 53 52.8
Gorai.007G330300 Gossypium raimondii HOM05D000054 ORTHO05D000171 2.2e-08 63.9 53 52.8
Nn3g21025 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.2e-08 63.9 50 60.0
TAR627G1135 Trochodendron aralioides HOM05D000054 ORTHO05D000171 2.2e-08 63.9 95 40.0
Duzib268G0777 Durio zibethinus HOM05D000054 ORTHO05D000171 2.9e-08 63.5 52 55.8
MBI12_g31576_MAGBIO Magnolia biondii HOM05D018976 ORTHO05D240433 2.9e-08 63.5 32 96.9
TAR627G0686 Trochodendron aralioides HOM05D000054 ORTHO05D000171 2.9e-08 63.5 95 40.0
Duzib268G1389 Durio zibethinus HOM05D000054 ORTHO05D000171 3.7e-08 63.2 52 55.8
Sed0026644 Sechium edule HOM05D000054 ORTHO05D000171 3.7e-08 63.2 95 35.8
Duzib213G0432 Durio zibethinus HOM05D000054 ORTHO05D000171 4.9e-08 62.8 95 37.9
Dinv26711 Davidia involucrata HOM05D000054 ORTHO05D000171 6.4e-08 62.4 91 34.1
Lj3g0023205 Lotus japonicus HOM05D000054 ORTHO05D000171 6.4e-08 62.4 95 36.8
GSVIVG01014113001 Vitis vinifera HOM05D000054 ORTHO05D000171 6.4e-08 62.4 54 48.1
MSTRG.14246 Avicennia marina HOM05D000054 ORTHO05D000171 8.3e-08 62.0 53 50.9
MBI11_g40892_MAGBIO Magnolia biondii HOM05D018976 ORTHO05D006421 8.3e-08 62.0 47 70.2
MBI02_g35792_MAGBIO Magnolia biondii HOM05D018976 ORTHO05D240793 1.4e-07 61.2 47 72.3
Rhsim04G0036000 Rhododendron simsii HOM05D000054 ORTHO05D000171 1.4e-07 61.2 47 63.8
TPR.G16469 Trifolium pratense HOM05D000054 ORTHO05D000171 1.4e-07 61.2 47 57.4
MBI02_g42784_MAGBIO Magnolia biondii HOM05D018976 ORTHO05D244944 1.8e-07 60.8 33 90.9
MBI07_g00474_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 1.8e-07 60.8 50 60.0
Nn3g21024 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.8e-07 60.8 50 56.0
Haze_09277 Corylus avellana HOM05D000054 ORTHO05D000171 2.4e-07 60.5 103 36.9
Dinv00945 Davidia involucrata HOM05D000054 ORTHO05D005077 2.4e-07 60.5 45 55.6
Gohir.A01G048500 Gossypium hirsutum HOM05D000054 ORTHO05D000171 2.4e-07 60.5 60 50.0
TAR627G0310 Trochodendron aralioides HOM05D000054 ORTHO05D000171 2.4e-07 60.5 42 61.9
MBI18_g28840_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 3.2e-07 60.1 28 92.9
PGR083G2082 Punica granatum HOM05D000054 ORTHO05D000171 3.2e-07 60.1 90 38.9
MBI11_g32388_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D036394 4.1e-07 59.7 45 71.1
Phvul.005G078500 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 4.1e-07 59.7 93 33.3
Rhsim04G0036100 Rhododendron simsii HOM05D000054 ORTHO05D000171 4.1e-07 59.7 50 58.0
Aqoxy4G00207 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 5.4e-07 59.3 85 43.5
Lj3g0027719 Lotus japonicus HOM05D000054 ORTHO05D000171 5.4e-07 59.3 63 41.3
CiPaw.11G158200 Carya illinoinensis HOM05D000054 ORTHO05D000171 7.0e-07 58.9 54 53.7
Gohir.D01G039200 Gossypium hirsutum HOM05D000054 ORTHO05D000171 7.0e-07 58.9 53 54.7
Gorai.002G048600 Gossypium raimondii HOM05D000054 ORTHO05D000171 7.0e-07 58.9 53 54.7
PSO528G0158 Papaver somniferum HOM05D000054 ORTHO05D000171 7.0e-07 58.9 59 50.8
Rhsim04G0035600 Rhododendron simsii HOM05D000054 ORTHO05D000171 7.0e-07 58.9 41 65.9
Sp3g13050 Schrenkiella parvula HOM05D000054 ORTHO05D000171 7.0e-07 58.9 64 46.9
Cpa.g.sc77.35 Carica papaya HOM05D000054 ORTHO05D000171 9.2e-07 58.5 57 49.1
Ciclev10018771m.g Citrus clementina HOM05D000054 ORTHO05D000171 9.2e-07 58.5 55 47.3
Nn3g21029 Nelumbo nucifera HOM05D000054 ORTHO05D000171 9.2e-07 58.5 93 32.3
Nn3g21991 Nelumbo nucifera HOM05D000054 ORTHO05D000171 9.2e-07 58.5 49 55.1
Rhsim04G0035800 Rhododendron simsii HOM05D000054 ORTHO05D000171 1.2e-06 58.2 40 65.0
Atru.chr2.2015 Acer truncatum HOM05D000054 ORTHO05D000171 1.6e-06 57.8 52 50.0
Gohir.A01G048751 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.6e-06 57.8 53 52.8
Gohir.D01G039300 Gossypium hirsutum HOM05D000054 ORTHO05D000171 1.6e-06 57.8 53 52.8
Gorai.002G048800 Gossypium raimondii HOM05D000054 ORTHO05D000171 1.6e-06 57.8 53 52.8
Gorai.007G330700 Gossypium raimondii HOM05D000054 ORTHO05D000171 1.6e-06 57.8 52 48.1
Medtr8g059605 Medicago truncatula HOM05D000054 ORTHO05D000171 1.6e-06 57.8 95 38.9
RcHm_v2.0_Chr5g0029771 Rosa chinensis HOM05D000054 ORTHO05D000171 1.6e-06 57.8 58 48.3
Eucgr.G01055 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.0e-06 57.4 79 43.0
Eucgr.K01987 Eucalyptus grandis HOM05D000054 ORTHO05D000171 2.0e-06 57.4 79 41.8
Glyma.13G266100 Glycine max HOM05D000054 ORTHO05D000171 2.0e-06 57.4 53 41.5
Gohir.A11G288800 Gossypium hirsutum HOM05D000054 ORTHO05D000171 2.0e-06 57.4 51 52.9
Lj8C146G14 Lonicera japonica HOM05D000054 ORTHO05D000171 2.0e-06 57.4 47 55.3
Manes.03G092416 Manihot esculenta HOM05D000054 ORTHO05D000171 2.0e-06 57.4 82 39.0
Rhsim04G0034600 Rhododendron simsii HOM05D000054 ORTHO05D000171 2.0e-06 57.4 41 63.4
THA.LOC104822572 Tarenaya hassleriana HOM05D000054 ORTHO05D000171 2.0e-06 57.4 60 53.3
Actinidia24770 Actinidia chinensis HOM05D000054 ORTHO05D000171 2.7e-06 57.0 74 40.5
COL.COLO4_17486 Corchorus olitorius HOM05D000054 ORTHO05D000171 2.7e-06 57.0 93 38.7
Haze_09292 Corylus avellana HOM05D000054 ORTHO05D000171 2.7e-06 57.0 92 37.0
Duzib213G0491 Durio zibethinus HOM05D000054 ORTHO05D000171 2.7e-06 57.0 59 44.1
Duzib213G0822 Durio zibethinus HOM05D000054 ORTHO05D000171 2.7e-06 57.0 59 44.1
Nn3g21031 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.7e-06 57.0 89 38.2
Cc05_g10830 Coffea canephora HOM05D000054 ORTHO05D000171 3.5e-06 56.6 95 35.8
Eucgr.K01762 Eucalyptus grandis HOM05D000054 ORTHO05D000171 3.5e-06 56.6 79 41.8
Gohir.A11G289082 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.5e-06 56.6 54 50.0
MBI08_g28978_MAGBIO Magnolia biondii HOM05D018976 ORTHO05D001209 3.5e-06 56.6 26 96.2
Rhsim04G0035100 Rhododendron simsii HOM05D000054 ORTHO05D000171 3.5e-06 56.6 40 65.0
CSS0019456 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 4.6e-06 56.2 86 34.9
Gohir.A01G048600 Gossypium hirsutum HOM05D000054 ORTHO05D000171 4.6e-06 56.2 60 46.7
Gohir.D11G303900 Gossypium hirsutum HOM05D000054 ORTHO05D000171 4.6e-06 56.2 39 61.5
Gorai.007G330600 Gossypium raimondii HOM05D000054 ORTHO05D000171 4.6e-06 56.2 39 61.5
Sed0010437 Sechium edule HOM05D000054 ORTHO05D000171 4.6e-06 56.2 93 32.3
ClCG11G017230 Citrullus lanatus HOM05D000054 ORTHO05D005077 5.9e-06 55.8 96 32.3
Gohir.D01G039400 Gossypium hirsutum HOM05D000054 ORTHO05D000171 5.9e-06 55.8 56 46.4
Gorai.002G048900 Gossypium raimondii HOM05D000054 ORTHO05D000171 5.9e-06 55.8 56 46.4
Eucgr.F01307 Eucalyptus grandis HOM05D000054 ORTHO05D000171 7.8e-06 55.5 79 40.5
Eucgr.K01724 Eucalyptus grandis HOM05D000054 ORTHO05D000171 7.8e-06 55.5 39 64.1
Eucgr.K01729 Eucalyptus grandis HOM05D000054 ORTHO05D000171 7.8e-06 55.5 39 64.1
Eucgr.K01759 Eucalyptus grandis HOM05D000054 ORTHO05D000171 7.8e-06 55.5 79 41.8
Eucgr.K01793 Eucalyptus grandis HOM05D000054 ORTHO05D000171 7.8e-06 55.5 79 41.8
Sed0016037 Sechium edule HOM05D000054 ORTHO05D000171 7.8e-06 55.5 95 34.7


User provided reference genes

Program Settings