Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g32523_MAGBIO Magnolia biondii HOM05D004561 ORTHO05D005315 8.8e-40 166.4 78 100.0
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 3.8e-27 124.4 76 65.8
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 4.2e-26 120.9 78 67.9
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 7.2e-26 120.2 76 69.7
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 9.4e-26 119.8 76 65.8
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 9.4e-26 119.8 78 71.8
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 1.2e-25 119.4 77 67.5
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 3.6e-25 117.9 78 65.4
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 8.0e-25 116.7 75 68.0
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 2.3e-24 115.2 75 66.7
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 4.0e-24 114.4 76 68.4
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 5.2e-24 114.0 78 65.4
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 5.2e-24 114.0 76 67.1
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 1.5e-23 112.5 76 68.4
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 1.5e-23 112.5 75 66.7
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 4.4e-23 110.9 76 65.8
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 7.5e-23 110.2 75 64.0
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 7.5e-23 110.2 76 60.5
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 9.8e-23 109.8 75 62.7
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.3e-22 109.4 76 65.8
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 1.3e-22 109.4 75 64.0
Sopen05g006540 Solanum pennellii HOM05D004561 ORTHO05D005315 1.7e-22 109.0 76 64.5
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 1.7e-22 109.0 76 64.5
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 2.2e-22 108.6 75 64.0
SEGI_12631 Sequoiadendron giganteum HOM05D004561 ORTHO05D005315 2.2e-22 108.6 77 61.0
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 2.8e-22 108.2 75 61.3
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 6.3e-22 107.1 75 64.0
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 6.3e-22 107.1 76 60.5
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 1.1e-21 106.3 75 60.0
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 1.1e-21 106.3 75 61.3
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 1.1e-21 106.3 76 61.8
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 1.4e-21 105.9 76 60.5
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 1.4e-21 105.9 75 60.0
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 1.4e-21 105.9 75 61.3
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 1.4e-21 105.9 75 61.3
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 1.4e-21 105.9 78 65.4
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 1.8e-21 105.5 75 61.3
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 1.8e-21 105.5 76 59.2
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 2.4e-21 105.1 75 62.7
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 2.4e-21 105.1 76 59.2
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 2.4e-21 105.1 75 60.0
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 3.1e-21 104.8 76 61.8
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 3.1e-21 104.8 76 60.5
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea HOM05D004561 ORTHO05D005315 4.1e-21 104.4 75 58.7
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 4.1e-21 104.4 75 60.0
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 4.1e-21 104.4 75 64.0
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 4.1e-21 104.4 76 60.5
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 5.4e-21 104.0 75 62.7
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 5.4e-21 104.0 75 58.7
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 5.4e-21 104.0 75 61.3
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 7.0e-21 103.6 75 60.0
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 7.0e-21 103.6 75 61.3
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 1.2e-20 102.8 75 60.0
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 1.6e-20 102.4 75 60.0
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.6e-20 102.4 75 60.0
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 1.6e-20 102.4 76 59.2
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 2.0e-20 102.1 76 59.2
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 2.0e-20 102.1 76 59.2
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 2.0e-20 102.1 75 58.7
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 2.7e-20 101.7 75 60.0
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.7e-20 101.7 75 60.0
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.7e-20 101.7 75 60.0
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.7e-20 101.7 75 60.0
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 2.7e-20 101.7 78 57.7
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 2.7e-20 101.7 75 60.0
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 2.7e-20 101.7 76 59.2
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 3.5e-20 101.3 76 59.2
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 7.7e-20 100.1 77 54.5
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 3.8e-19 97.8 76 64.5
Solyc05g010730.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 5.0e-19 97.4 69 62.3
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 6.6e-19 97.1 87 52.9
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 8.6e-19 96.7 78 57.7
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 8.6e-19 96.7 69 62.3
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 1.5e-18 95.9 75 58.7
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 1.9e-18 95.5 76 63.2
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 2.5e-18 95.1 76 59.2
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 2.5e-18 95.1 76 63.2
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 3.3e-18 94.7 75 60.0
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 7.2e-18 93.6 73 56.2
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 9.5e-18 93.2 76 60.5
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 1.2e-17 92.8 78 57.7
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 1.2e-17 92.8 75 54.7
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.2e-17 92.8 75 58.7
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 1.2e-17 92.8 76 60.5
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 1.6e-17 92.4 75 62.7
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 1.6e-17 92.4 75 62.7
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.6e-17 92.4 66 62.1
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 2.8e-17 91.7 76 57.9
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 2.8e-17 91.7 76 61.8
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 3.6e-17 91.3 76 60.5
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 4.7e-17 90.9 76 60.5
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 1.4e-16 89.4 76 60.5
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 1.4e-16 89.4 75 58.7
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 2.3e-16 88.6 76 60.5
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 3.0e-16 88.2 79 57.0
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 4.0e-16 87.8 76 59.2
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 4.0e-16 87.8 76 59.2
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 4.0e-16 87.8 59 64.4
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 5.2e-16 87.4 76 59.2
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 8.9e-16 86.7 76 56.6
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.2e-15 86.3 76 60.5
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 1.5e-15 85.9 75 53.3
Nitab4.5_0013603g0010 Nicotiana tabacum HOM05D004561 ORTHO05D005315 4.9e-14 80.9 56 58.9
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 6.3e-14 80.5 77 53.2
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 1.8e-13 79.0 77 41.6
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 1.8e-13 79.0 63 54.0
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 1.8e-13 79.0 76 44.7
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 4.1e-13 77.8 56 60.7
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.6e-12 75.9 53 62.3
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 2.0e-12 75.5 56 55.4
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 1.0e-11 73.2 56 53.6
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.3e-11 72.8 53 60.4
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.3e-11 72.8 53 60.4
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 8.6e-11 70.1 53 58.5
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 1.9e-10 68.9 70 45.7
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.3e-10 67.8 80 43.8
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 7.3e-10 67.0 52 57.7
SalBow1G7315 Salvia bowleyana HOM05D004561 ORTHO05D005315 9.5e-10 66.6 55 56.4
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 1.6e-09 65.9 55 56.4
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.8e-09 65.1 59 50.8
SHI05852 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 63.2 71 45.1
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 4.0e-08 61.2 70 41.4
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 1.5e-07 59.3 75 40.0
BcaC07g40185 Brassica carinata HOM05D004561 ORTHO05D005315 1.3e-06 56.2 30 80.0


User provided reference genes

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