Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g26490_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D036564 1.4e-127 459.5 224 100.0
MBI07_g18720_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D036564 2.5e-23 113.2 135 47.4
MBI18_g40698_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 2.9e-19 99.8 72 68.1
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 6.5e-19 98.6 181 37.0
MBI01_g03367_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D036564 1.2e-17 94.4 159 38.4
MBI18_g14311_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 1.2e-17 94.4 70 62.9
MBI11_g02484_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 2.1e-17 93.6 87 51.7
MBI16_g31131_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 1.3e-16 90.9 75 54.7
CSS0004631 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.1e-16 89.0 117 44.4
Rhsim02G0024000 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.7e-16 88.6 93 48.4
CSS0044374 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D014307 4.3e-15 85.9 80 52.5
TWI32G0910 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.3e-15 85.9 80 51.2
CSS0049161 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.7e-15 85.5 88 50.0
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 2.2e-14 83.6 195 31.8
CSS0043413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-14 83.2 88 48.9
CSS0008496 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-13 81.3 88 46.6
Rhsim11G0031100 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.4e-13 80.1 214 29.9
Atru.chr8.135 Acer truncatum HOM05D000004 ORTHO05D000002 3.1e-13 79.7 88 46.6
EL10Ac4g09853 Beta vulgaris HOM05D000004 ORTHO05D000002 4.1e-13 79.3 83 50.6
CSS0023637 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-13 79.3 88 46.6
CSS0023711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-13 79.3 88 46.6
FvH4_5g25851 Fragaria vesca HOM05D000004 ORTHO05D000002 4.1e-13 79.3 101 47.5
CSS0011571 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.0e-13 78.2 79 49.4
Atru.chr6.117 Acer truncatum HOM05D000004 ORTHO05D000002 1.2e-12 77.8 80 50.0
RcHm_v2.0_Chr7g0229301 Rosa chinensis HOM05D000004 ORTHO05D000002 2.0e-12 77.0 84 51.2
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 3.4e-12 76.3 84 47.6
SEGI_34349 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.5e-12 75.9 80 50.0
CSS0022143 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.7e-12 75.1 88 45.5
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-11 74.7 187 32.6
MBI18_g40700_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D030052 1.3e-11 74.3 72 56.9
SEGI_07278 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.3e-11 74.3 76 51.3
RcHm_v2.0_Chr3g0461871 Rosa chinensis HOM05D000004 ORTHO05D000002 1.7e-11 73.9 88 46.6
RcHm_v2.0_Chr4g0427231 Rosa chinensis HOM05D000004 ORTHO05D000002 2.9e-11 73.2 88 46.6
ECA236G1636 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.5e-11 72.0 177 31.6
Rhsim02G0058400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-10 71.2 89 43.8
MBI18_g40699_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 1.4e-10 70.9 99 44.4
BcaC05g27996 Brassica carinata HOM05D000004 ORTHO05D000002 2.5e-10 70.1 68 54.4
BcaC03g16674 Brassica carinata HOM05D000004 ORTHO05D000002 3.2e-10 69.7 82 46.3
CSS0034640 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.2e-10 69.3 81 48.1
CAN.G224.14 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-10 69.3 86 45.3
Thecc.01G232700 Theobroma cacao HOM05D000004 ORTHO05D000002 4.2e-10 69.3 92 38.0
EL10Ac3g06995 Beta vulgaris HOM05D000004 ORTHO05D000002 5.5e-10 68.9 114 36.8
BcaC03g16463 Brassica carinata HOM05D000004 ORTHO05D000002 5.5e-10 68.9 82 45.1
FvH4_4g12741 Fragaria vesca HOM05D000004 ORTHO05D000002 9.4e-10 68.2 82 42.7
Thecc.03G066200 Theobroma cacao HOM05D000004 ORTHO05D000002 9.4e-10 68.2 92 39.1
PSO832G1801 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 67.4 117 31.6
Hma1.2p1_0460F.1_g157550 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.1e-09 67.0 80 43.8
ClCG02G009860 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.7e-09 66.6 75 42.7
EL10Ac6g14457 Beta vulgaris HOM05D000004 ORTHO05D000002 3.6e-09 66.2 83 42.2
EL10Ac1g02257 Beta vulgaris HOM05D008382 ORTHO05D000002 4.6e-09 65.9 103 35.9
SEGI_31282 Sequoiadendron giganteum HOM05D000109 ORTHO05D000520 4.6e-09 65.9 74 47.3
Rhsim10G0140700 Rhododendron simsii HOM05D002417 ORTHO05D002589 7.9e-09 65.1 219 26.0
ECA236G0802 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-08 64.7 101 40.6
MBI16_g33520_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D000002 1.0e-08 64.7 64 56.2
QL04p050706 Quercus lobata HOM05D000059 ORTHO05D009759 1.0e-08 64.7 60 55.0
Thecc.05G097300 Theobroma cacao HOM05D000004 ORTHO05D000002 1.0e-08 64.7 92 35.9
CAN.G1219.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.4e-08 64.3 95 41.1
ECA233G4764 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-08 64.3 165 36.4
ECA236G3795 Erigeron canadensis HOM05D000006 ORTHO05D000452 1.8e-08 63.9 90 42.2
SEGI_00646 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.8e-08 63.9 94 40.4
TWI77G0040 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 2.3e-08 63.5 76 44.7
ECA238G0392 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.0e-08 63.2 84 45.2
PSO017G7238 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-08 63.2 94 39.4
PSO063G0884 Papaver somniferum HOM05D001642 ORTHO05D000002 3.0e-08 63.2 75 42.7
PSO384G2288 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-08 63.2 144 30.6
TWI14G0262 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 3.0e-08 63.2 93 40.9
ECA246G2746 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-08 62.8 101 39.6
ECA247G0559 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-08 62.8 101 39.6
PSO675G8221 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-08 62.8 95 35.8
ECA246G2972 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.1e-08 62.4 93 44.1
SEGI_22387 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.1e-08 62.4 83 43.4
PSO017G5027 Papaver somniferum HOM05D000004 ORTHO05D000002 8.8e-08 61.6 126 30.2
PSO063G0452 Papaver somniferum HOM05D000004 ORTHO05D000002 8.8e-08 61.6 126 30.2
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 8.8e-08 61.6 126 30.2
PSO478G0935 Papaver somniferum HOM05D000004 ORTHO05D000002 8.8e-08 61.6 126 30.2
PSO675G6845 Papaver somniferum HOM05D000004 ORTHO05D000002 8.8e-08 61.6 126 30.2
PGR083G1481 Punica granatum HOM05D000004 ORTHO05D000002 8.8e-08 61.6 122 32.0
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 61.2 126 30.2
PSO675G9047 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 61.2 126 30.2
ECA240G3119 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 60.8 124 33.9
ECA246G3946 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 60.8 70 45.7
Psat6g127360 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-07 60.8 167 32.3
Rhsim07G0138000 Rhododendron simsii HOM05D001950 ORTHO05D001926 1.5e-07 60.8 81 40.7
Atru.chr6.910 Acer truncatum HOM05D000004 ORTHO05D000002 2.0e-07 60.5 81 40.7
ECA232G4741 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 60.5 105 39.0
ECA233G0715 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 60.5 95 40.0
ECA236G1880 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 60.5 103 35.0
ECA246G4126 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-07 60.5 93 43.0
PSO063G5531 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-07 60.5 82 39.0
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-07 60.5 126 30.2
BcaC03g16898 Brassica carinata HOM05D000004 ORTHO05D000002 2.6e-07 60.1 81 44.4
RhsimUnG0220300 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.6e-07 60.1 81 40.7
SEGI_39755 Sequoiadendron giganteum HOM05D001337 ORTHO05D000002 2.6e-07 60.1 90 43.3
ECA247G1778 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-07 59.7 84 44.0
ECA248G3424 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-07 59.7 101 37.6
Hma1.2p1_1832F.1_g304590 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.3e-07 59.7 267 25.5
ECA236G1830 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-07 59.3 101 37.6
ECA238G3925 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-07 59.3 84 42.9
ECA246G3207 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-07 59.3 122 37.7
Hma1.2p1_0101F.1_g049370 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.4e-07 59.3 93 43.0
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-07 59.3 126 29.4
ECA232G4259 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-07 58.9 84 41.7
ECA233G5904 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-07 58.9 80 42.5
ECA238G4381 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-07 58.9 84 42.9
ECA240G0185 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-07 58.9 74 44.6
Prupe.7G034800 Prunus persica HOM05D000004 ORTHO05D000563 5.7e-07 58.9 104 32.7
Prupe.8G229300 Prunus persica HOM05D000650 ORTHO05D000735 7.4e-07 58.5 190 27.9
TWI53G0551 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.4e-07 58.5 117 35.9
Ca_27390_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.7e-07 58.2 128 34.4
ECA232G2839 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.7e-07 58.2 101 37.6
ECA246G1685 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.7e-07 58.2 80 42.5
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 9.7e-07 58.2 117 29.9
Rhsim02G0214500 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.7e-07 58.2 156 29.5
THA.LOC109116762 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.7e-07 58.2 72 43.1
ECA233G1186 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 57.8 121 34.7
ECA240G2450 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 57.8 84 42.9
ECA248G2368 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 57.8 84 42.9
FvH4_2g19253 Fragaria vesca HOM05D000004 ORTHO05D000002 1.3e-06 57.8 78 41.0
FvH4_3g44612 Fragaria vesca HOM05D000004 ORTHO05D000002 1.3e-06 57.8 144 27.1
Hma1.2p1_0085F.1_g044690 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.3e-06 57.8 58 50.0
PSO063G4042 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 57.8 144 29.2
Rhsim06G0164300 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.3e-06 57.8 72 43.1
SHI28953 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-06 57.8 144 31.2
BcaC07g39410 Brassica carinata HOM05D000004 ORTHO05D000002 1.7e-06 57.4 52 55.8
Hma1.2p1_3477F.1_g336310 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.7e-06 57.4 84 38.1
Ah.10g032230 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.2e-06 57.0 138 32.6
CSS0000480 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-06 57.0 80 36.2
CSS0024529 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-06 57.0 80 36.2
ECA240G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-06 57.0 84 40.5
ECA247G1511 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-06 57.0 77 42.9
ECA248G1815 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-06 57.0 155 29.0
Hma1.2p1_1730F.1_g299630 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.2e-06 57.0 88 40.9
PSO170G1357 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-06 57.0 104 33.7
PGR004G0370 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-06 57.0 69 40.6
Rhsim01G0143500 Rhododendron simsii HOM05D000840 ORTHO05D000670 2.2e-06 57.0 86 39.5
ECA238G2679 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-06 56.6 104 32.7
ECA246G0636 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.8e-06 56.6 84 41.7
MBI14_g25893_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 2.8e-06 56.6 81 39.5
PSO063G7105 Papaver somniferum HOM05D010112 ORTHO05D000002 2.8e-06 56.6 84 38.1
PGR083G2455 Punica granatum HOM05D000004 ORTHO05D000002 2.8e-06 56.6 101 30.7
Sabra19G0020900 Salix brachista HOM05D000004 ORTHO05D000002 2.8e-06 56.6 130 31.5
Sabra19G0021900 Salix brachista HOM05D000004 ORTHO05D000002 2.8e-06 56.6 222 26.6
SEGI_01347 Sequoiadendron giganteum HOM05D004129 ORTHO05D005039 2.8e-06 56.6 96 35.4
MSTRG.4364 Avicennia marina HOM05D000004 ORTHO05D000002 3.7e-06 56.2 108 31.5
BcaC09g50230 Brassica carinata HOM05D000004 ORTHO05D000002 3.7e-06 56.2 90 40.0
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-06 56.2 101 35.6
ECA234G3312 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-06 56.2 85 40.0
ECA236G2047 Erigeron canadensis HOM05D000002 ORTHO05D002065 3.7e-06 56.2 82 39.0
SEGI_26455 Sequoiadendron giganteum HOM05D000004 ORTHO05D024702 3.7e-06 56.2 64 48.4
TAR452G0006 Trochodendron aralioides HOM05D000004 ORTHO05D010212 3.7e-06 56.2 79 45.6
PSO339G1989 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-06 55.8 66 43.9
PGR031G2743 Punica granatum HOM05D000004 ORTHO05D000002 4.8e-06 55.8 122 32.0
PGR102G0022 Punica granatum HOM05D000004 ORTHO05D000002 4.8e-06 55.8 101 30.7
Rhsim07G0165900 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.8e-06 55.8 84 41.7
SHI07309 Sapria himalayana HOM05D000004 ORTHO05D000002 4.8e-06 55.8 107 35.5
Atru.chr10.1012 Acer truncatum HOM05D000004 ORTHO05D000002 6.3e-06 55.5 80 41.2
ECA238G4663 Erigeron canadensis HOM05D000006 ORTHO05D000002 6.3e-06 55.5 84 41.7
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.3e-06 55.5 80 36.2
RcHm_v2.0_Chr3g0452401 Rosa chinensis HOM05D000004 ORTHO05D000002 6.3e-06 55.5 72 40.3
SHI04785 Sapria himalayana HOM05D000004 ORTHO05D000002 6.3e-06 55.5 91 37.4
Atru.chr2.1620 Acer truncatum HOM05D000004 ORTHO05D000002 8.2e-06 55.1 80 37.5
ECA167G0002 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.2e-06 55.1 75 42.7
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 8.2e-06 55.1 73 42.5
ECA246G3393 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.2e-06 55.1 77 42.9
ECA248G3196 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.2e-06 55.1 145 29.7
PSO063G4659 Papaver somniferum HOM05D000004 ORTHO05D000002 8.2e-06 55.1 86 38.4
PSO596G0027 Papaver somniferum HOM05D000004 ORTHO05D000002 8.2e-06 55.1 81 38.3
PGR031G2499 Punica granatum HOM05D000004 ORTHO05D000002 8.2e-06 55.1 117 29.9
SHI33973 Sapria himalayana HOM05D000004 ORTHO05D000002 8.2e-06 55.1 106 33.0
SEGI_13621 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.2e-06 55.1 60 45.0
SEGI_24325 Sequoiadendron giganteum HOM05D020499 ORTHO05D000002 8.2e-06 55.1 60 46.7


User provided reference genes

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