Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g25562_MAGBIO Magnolia biondii HOM05D003796 ORTHO05D004486 1.3e-157 559.7 294 100.0
TAR362G0252 Trochodendron aralioides HOM05D003796 ORTHO05D004486 1.3e-59 234.2 238 58.0
CDE04G0900 Ceratophyllum demersum HOM05D003796 ORTHO05D004486 2.8e-54 216.5 168 67.9
Nn7g37675 Nelumbo nucifera HOM05D003796 ORTHO05D004486 2.8e-54 216.5 173 65.3
ATR0075G004 Amborella trichopoda HOM05D003796 ORTHO05D004486 1.3e-51 207.6 164 66.5
Prupe.1G586900 Prunus persica HOM05D003796 ORTHO05D004486 6.4e-51 205.3 174 62.1
Cpa.g.sc9.357 Carica papaya HOM05D003796 ORTHO05D004486 7.1e-50 201.8 163 64.4
MSTRG.22023 Avicennia marina HOM05D003796 ORTHO05D004486 3.5e-49 199.5 153 67.3
CiPaw.01G171300 Carya illinoinensis HOM05D003796 ORTHO05D004486 3.5e-49 199.5 169 62.7
Dinv33197 Davidia involucrata HOM05D003796 ORTHO05D004486 3.5e-49 199.5 174 63.8
Hma1.2p1_0150F.1_g066730 Hydrangea macrophylla HOM05D003796 ORTHO05D004486 1.0e-48 198.0 196 55.6
MD08G1249800 Malus domestica HOM05D003796 ORTHO05D004486 1.8e-48 197.2 170 64.1
Lsat_1_v5_gn_3_110880 Lactuca sativa HOM05D003796 ORTHO05D004486 3.0e-48 196.4 161 61.5
MELO3C022427.2 Cucumis melo HOM05D003796 ORTHO05D004486 1.1e-47 194.5 162 63.0
Sed0014142 Sechium edule HOM05D003796 ORTHO05D004486 1.1e-47 194.5 151 66.2
CsaV3_6G007010 Cucumis sativus L. HOM05D003796 ORTHO05D004486 1.9e-47 193.7 166 62.7
RcHm_v2.0_Chr4g0406061 Rosa chinensis HOM05D003796 ORTHO05D004486 1.9e-47 193.7 176 60.2
ECA240G0037 Erigeron canadensis HOM05D003796 ORTHO05D004486 2.5e-47 193.4 181 59.1
Potri.013G125600 Populus trichocarpa HOM05D003796 ORTHO05D004486 2.5e-47 193.4 155 63.2
PGR042G0542 Punica granatum HOM05D003796 ORTHO05D004486 4.3e-47 192.6 167 61.7
PSO832G1541 Papaver somniferum HOM05D003796 ORTHO05D004486 4.8e-46 189.1 194 53.1
Aqoxy2G01069 Aquilegia oxysepala HOM05D003796 ORTHO05D004486 8.1e-46 188.3 197 52.3
Actinidia28983 Actinidia chinensis HOM05D003796 ORTHO05D004486 1.4e-45 187.6 163 62.0
Glyma.12G048900 Glycine max HOM05D003796 ORTHO05D004486 4.0e-45 186.0 212 50.5
Duzib268G1213 Durio zibethinus HOM05D003796 ORTHO05D004486 6.9e-45 185.3 206 52.4
Migut.N03072 Erythranthe guttata HOM05D003796 ORTHO05D004486 1.2e-44 184.5 174 59.8
CANSAT35G0237 Cannabis sativa HOM05D003796 ORTHO05D004486 1.0e-43 181.4 153 62.7
GSVIVG01038135001 Vitis vinifera HOM05D003796 ORTHO05D004486 1.0e-43 181.4 163 57.1
PSO210G4043 Papaver somniferum HOM05D003796 ORTHO05D004486 1.3e-43 181.0 194 51.5
EL10Ac3g06067 Beta vulgaris HOM05D003796 ORTHO05D004486 2.2e-43 180.3 180 52.8
HanXRQChr13g0418501 Helianthus annuus HOM05D003796 ORTHO05D004486 2.9e-43 179.9 168 58.3
Lj3g0002298 Lotus japonicus HOM05D003796 ORTHO05D004486 4.9e-43 179.1 163 58.3
QL10p054554 Quercus lobata HOM05D003796 ORTHO05D004486 6.5e-43 178.7 179 56.4
TWI63G0811 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 8.4e-43 178.3 169 56.2
PGSC0003DMG401007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 1.4e-42 177.6 161 60.2
Manes.11G130100 Manihot esculenta HOM05D003796 ORTHO05D004486 1.9e-42 177.2 159 57.9
CAN.G1432.20 Capsicum annuum HOM05D003796 ORTHO05D004486 5.5e-42 175.6 161 59.0
Ciclev10021832m.g Citrus clementina HOM05D003796 ORTHO05D004486 5.5e-42 175.6 152 59.9
Gohir.A05G327600 Gossypium hirsutum HOM05D003796 ORTHO05D004486 5.5e-42 175.6 155 58.1
Gohir.D05G328000 Gossypium hirsutum HOM05D003796 ORTHO05D004486 5.5e-42 175.6 155 58.7
VMungo1127G1870 Vigna mungo HOM05D003796 ORTHO05D004486 7.1e-42 175.3 166 56.0
Lalb_Chr19g0138481 Lupinus albus HOM05D003796 ORTHO05D004486 1.6e-41 174.1 158 55.7
Atru.chr4.1395 Acer truncatum HOM05D003796 ORTHO05D004486 2.1e-41 173.7 140 64.3
Solyc06g074890.1 Solanum lycopersicum HOM05D003796 ORTHO05D004486 2.7e-41 173.3 161 59.0
Sopen06g031300 Solanum pennellii HOM05D003796 ORTHO05D004486 3.5e-41 172.9 161 59.0
Os01g0894700 Oryza sativa ssp. japonica HOM05D003796 ORTHO05D004486 6.0e-41 172.2 159 55.3
Gorai.009G351700 Gossypium raimondii HOM05D003796 ORTHO05D004486 1.0e-40 171.4 156 58.3
Medtr4g068280 Medicago truncatula HOM05D003796 ORTHO05D004486 6.7e-40 168.7 208 48.6
Phvul.011G051000 Phaseolus vulgaris HOM05D003796 ORTHO05D004486 1.9e-39 167.2 166 53.0
Zm00001eb144880 Zea mays HOM05D003796 ORTHO05D004486 9.6e-39 164.9 157 54.1
SGA_v2.0_scaffold25G10998 Striga asiatica HOM05D003796 ORTHO05D004486 1.6e-38 164.1 212 46.7
TPR.G10226 Trifolium pratense HOM05D003796 ORTHO05D004486 8.2e-38 161.8 200 48.0
Nitab4.5_0007977g0020 Nicotiana tabacum HOM05D003796 ORTHO05D004486 3.1e-37 159.8 161 55.3
Ca_20812_v3 Cicer arietinum L. HOM05D003796 ORTHO05D004486 5.3e-37 159.1 158 55.1
PGSC0003DMG402007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 2.6e-36 156.8 159 52.8
arahy.Tifrunner.gnm1.ann1.P7R60W Arachis hypogaea HOM05D003796 ORTHO05D004486 7.6e-36 155.2 161 51.6
Sc19g0002760 Simmondsia chinensis HOM05D003796 ORTHO05D004486 1.0e-35 154.8 128 64.1
Sopen06g031310 Solanum pennellii HOM05D003796 ORTHO05D004486 1.7e-35 154.1 159 52.8
FAN12G1593 Fragaria x ananassa HOM05D003796 ORTHO05D004486 2.2e-35 153.7 164 54.9
Peaxi162Scf00568g00527 Petunia axillaris HOM05D003796 ORTHO05D004486 2.2e-35 153.7 154 54.5
Solyc06g074900.3 Solanum lycopersicum HOM05D003796 ORTHO05D004486 3.8e-35 152.9 159 52.8
arahy.Tifrunner.gnm1.ann1.I4880T Arachis hypogaea HOM05D003796 ORTHO05D004486 1.6e-33 147.5 196 44.9
SEGI_15351 Sequoiadendron giganteum HOM05D003796 ORTHO05D004486 1.8e-32 144.1 157 47.8
Cc06_g21590 Coffea canephora HOM05D003796 ORTHO05D004486 8.7e-32 141.7 105 66.7
FvH4_4g10500 Fragaria vesca HOM05D003796 ORTHO05D004486 3.3e-31 139.8 130 58.5
CAN.G1001.53 Capsicum annuum HOM05D003796 ORTHO05D004486 4.3e-31 139.4 159 50.9
AUR62002376 Chenopodium quinoa HOM05D003796 ORTHO05D004486 1.3e-30 137.9 128 57.0
AUR62023807 Chenopodium quinoa HOM05D003796 ORTHO05D004486 2.2e-30 137.1 112 62.5
Ah.13g073570 Amaranthus hybridus HOM05D003796 ORTHO05D004486 4.8e-30 136.0 159 47.8
AagrBONN_evm.TU.Sc2ySwM_117.3751 Anthoceros agrestis HOM05D003796 ORTHO05D004486 9.1e-29 131.7 165 43.6
Pp3c14_20300 Physcomitrium patens HOM05D003796 ORTHO05D004486 3.8e-27 126.3 132 49.2
Psat7g207840 Pisum sativum HOM05D003796 ORTHO05D004486 2.5e-26 123.6 111 56.8
CAN.G1001.52 Capsicum annuum HOM05D003796 ORTHO05D004486 4.2e-26 122.9 99 63.6
Hund03191 Selenicereus undatus HOM05D003796 ORTHO05D004486 3.6e-25 119.8 167 44.3
Nn1g09689 Nelumbo nucifera HOM05D003796 ORTHO05D004486 6.1e-25 119.0 186 33.9
PSO210G6849 Papaver somniferum HOM05D003796 ORTHO05D004486 5.1e-24 115.9 210 32.9
AT2G30695 Arabidopsis thaliana HOM05D003796 ORTHO05D004486 3.3e-23 113.2 139 38.8
BraA04t17867Z Brassica rapa HOM05D003796 ORTHO05D004486 3.3e-23 113.2 139 38.1
Cpa.g.sc9.356 Carica papaya HOM05D003796 ORTHO05D004486 3.3e-23 113.2 157 36.9
Eucgr.A00010 Eucalyptus grandis HOM05D003796 ORTHO05D004486 9.7e-23 111.7 88 65.9
ClCG06G001080 Citrullus lanatus HOM05D003796 ORTHO05D004486 1.7e-22 110.9 142 49.3
MD04G1048700 Malus domestica HOM05D003796 ORTHO05D004486 2.8e-22 110.2 211 34.1
Medtr3g009150 Medicago truncatula HOM05D003796 ORTHO05D004486 2.8e-22 110.2 152 38.8
Sp4g13210 Schrenkiella parvula HOM05D003796 ORTHO05D004486 2.8e-22 110.2 139 36.7
CARHR124190 Cardamine hirsuta HOM05D003796 ORTHO05D004486 3.7e-22 109.8 191 34.0
CBR_g31497 Chara braunii HOM05D003796 ORTHO05D004486 3.7e-22 109.8 129 45.0
QL93p1902_0792 Quercus lobata HOM05D003796 ORTHO05D004486 4.8e-22 109.4 90 60.0
Eucgr.A00012 Eucalyptus grandis HOM05D003796 ORTHO05D004486 6.3e-22 109.0 194 34.0
Carub.0004s1187 Capsella rubella HOM05D003796 ORTHO05D004486 8.2e-22 108.6 139 36.7
PSO832G2763 Papaver somniferum HOM05D003796 ORTHO05D004486 8.2e-22 108.6 105 47.6
PGR042G1269 Punica granatum HOM05D003796 ORTHO05D004486 8.2e-22 108.6 157 36.3
Prupe.1G206000 Prunus persica HOM05D003796 ORTHO05D004486 1.8e-21 107.5 147 40.1
HPP92_001250 Vanilla planifolia HOM05D003796 ORTHO05D004486 1.8e-21 107.5 129 40.3
HPP92_001266 Vanilla planifolia HOM05D003796 ORTHO05D004486 1.8e-21 107.5 129 40.3
Oeu021569.1 Olea europaea HOM05D003796 ORTHO05D004486 2.4e-21 107.1 76 68.4
QL10p054570 Quercus lobata HOM05D003796 ORTHO05D004486 4.1e-21 106.3 90 58.9
VMungo1080G1154 Vigna mungo HOM05D003796 ORTHO05D004486 5.3e-21 105.9 159 37.7
Glyma.04G117800 Glycine max HOM05D003796 ORTHO05D004486 6.9e-21 105.5 124 40.3
RcHm_v2.0_Chr5g0044351 Rosa chinensis HOM05D003796 ORTHO05D004486 9.1e-21 105.1 150 36.0
TAR362G0647 Trochodendron aralioides HOM05D003796 ORTHO05D004486 9.1e-21 105.1 124 43.5
AL4G25590 Arabidopsis lyrata HOM05D003796 ORTHO05D004486 1.2e-20 104.8 146 34.9
Cc06_g21580 Coffea canephora HOM05D003796 ORTHO05D004486 1.2e-20 104.8 216 34.3
Sabra13G0104300 Salix brachista HOM05D003796 ORTHO05D004486 1.2e-20 104.8 146 34.9
CsaV3_6G007000 Cucumis sativus L. HOM05D003796 ORTHO05D004486 1.5e-20 104.4 141 36.2
Actinidia28984 Actinidia chinensis HOM05D003796 ORTHO05D004486 2.0e-20 104.0 124 42.7
Aqoxy5G00021 Aquilegia oxysepala HOM05D003796 ORTHO05D004486 2.0e-20 104.0 156 35.3
CANSAT80G1979 Cannabis sativa HOM05D003796 ORTHO05D004486 2.0e-20 104.0 187 35.3
arahy.Tifrunner.gnm1.ann1.T3U7B8 Arachis hypogaea HOM05D003796 ORTHO05D004486 2.6e-20 103.6 119 41.2
CANSAT80G2480 Cannabis sativa HOM05D003796 ORTHO05D004486 3.4e-20 103.2 151 37.1
ClCG06G001070 Citrullus lanatus HOM05D003796 ORTHO05D004486 3.4e-20 103.2 144 35.4
MELO3C022428.2 Cucumis melo HOM05D003796 ORTHO05D004486 3.4e-20 103.2 143 36.4
Potri.013G125500 Populus trichocarpa HOM05D003796 ORTHO05D004486 3.4e-20 103.2 153 35.3
FAN22G2021 Fragaria x ananassa HOM05D003796 ORTHO05D004486 4.5e-20 102.8 105 55.2
MSTRG.24566 Avicennia marina HOM05D003796 ORTHO05D004486 5.9e-20 102.4 146 37.7
THA.LOC104800810 Tarenaya hassleriana HOM05D003796 ORTHO05D004486 5.9e-20 102.4 160 35.6
Atru.chr4.1394 Acer truncatum HOM05D003796 ORTHO05D004486 7.7e-20 102.1 156 34.0
Manes.11G130200 Manihot esculenta HOM05D003796 ORTHO05D004486 1.0e-19 101.7 155 31.6
CiPaw.02G100800 Carya illinoinensis HOM05D003796 ORTHO05D004486 1.3e-19 101.3 119 40.3
Gohir.A02G091201 Gossypium hirsutum HOM05D003796 ORTHO05D004486 1.3e-19 101.3 153 35.3
Gohir.A02G091300 Gossypium hirsutum HOM05D003796 ORTHO05D004486 1.3e-19 101.3 153 35.3
CDE09G0312 Ceratophyllum demersum HOM05D003796 ORTHO05D004486 1.7e-19 100.9 150 37.3
Thecc.04G167900 Theobroma cacao HOM05D003796 ORTHO05D004486 1.7e-19 100.9 149 36.2
CSS0047221 Camellia sinensis var. sinensis HOM05D003796 ORTHO05D004486 2.2e-19 100.5 125 39.2
Ciclev10022254m.g Citrus clementina HOM05D003796 ORTHO05D004486 2.2e-19 100.5 168 31.5
Hma1.2p1_0150F.1_g066720 Hydrangea macrophylla HOM05D003796 ORTHO05D004486 2.2e-19 100.5 143 39.2
GSVIVG01038134001 Vitis vinifera HOM05D003796 ORTHO05D004486 2.2e-19 100.5 117 38.5
Lalb_Chr18g0048811 Lupinus albus HOM05D003796 ORTHO05D004486 2.9e-19 100.1 143 35.0
Sabra13G0104400 Salix brachista HOM05D003796 ORTHO05D004486 6.5e-19 99.0 76 60.5
BolC4t27478H Brassica oleracea HOM05D003796 ORTHO05D004486 8.5e-19 98.6 140 35.0
Duzib268G0739 Durio zibethinus HOM05D003796 ORTHO05D004486 8.5e-19 98.6 127 35.4
Lj3g0024133 Lotus japonicus HOM05D005948 ORTHO05D007689 8.5e-19 98.6 139 36.7
Zm00001eb102770 Zea mays HOM05D003796 ORTHO05D004486 8.5e-19 98.6 112 42.0
ATR0075G045 Amborella trichopoda HOM05D003796 ORTHO05D004486 1.1e-18 98.2 176 33.0
C04p59700 Brassica napus HOM05D003796 ORTHO05D004486 1.1e-18 98.2 140 34.3
DCAR_005444 Daucus carota HOM05D003796 ORTHO05D004486 1.1e-18 98.2 144 33.3
Dinv01938 Davidia involucrata HOM05D003796 ORTHO05D004486 1.1e-18 98.2 147 38.1
FAN07G1083 Fragaria x ananassa HOM05D003796 ORTHO05D004486 1.1e-18 98.2 105 54.3
Thhalv10017862m.g Eutrema salsugineum HOM05D003796 ORTHO05D004486 1.4e-18 97.8 152 32.9
Nitab4.5_0000856g0240 Nicotiana tabacum HOM05D003796 ORTHO05D004486 1.4e-18 97.8 100 54.0
TWI63G1493 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 1.9e-18 97.4 143 31.5
Os09g0515400 Oryza sativa ssp. japonica HOM05D003796 ORTHO05D004486 1.6e-17 94.4 131 36.6
Cfa015262 Carpinus fangiana HOM05D003796 ORTHO05D004486 2.1e-17 94.0 170 32.4
Dinv02937 Davidia involucrata HOM05D003796 ORTHO05D004486 2.1e-17 94.0 125 39.2
A04p23400 Brassica napus HOM05D003796 ORTHO05D004486 2.7e-17 93.6 149 32.9
MBI08_g25561_MAGBIO Magnolia biondii HOM05D003796 ORTHO05D004486 3.6e-17 93.2 153 35.3
arahy.Tifrunner.gnm1.ann1.43ZKU2 Arachis hypogaea HOM05D003796 ORTHO05D004486 4.7e-17 92.8 152 36.2
TPR.G16683 Trifolium pratense HOM05D003796 ORTHO05D004486 7.9e-17 92.0 171 33.3
FAN12G2909 Fragaria x ananassa HOM05D003796 ORTHO05D004486 1.0e-16 91.7 95 55.8
FAN25G0936 Fragaria x ananassa HOM05D003796 ORTHO05D004486 5.2e-16 89.4 180 30.0
Aa31LG5G6120 Aethionema arabicum HOM05D004685 ORTHO05D005412 1.1e-15 88.2 150 30.7
Zm00001eb318420 Zea mays HOM05D003796 ORTHO05D004486 1.5e-15 87.8 125 36.8
arahy.Tifrunner.gnm1.ann1.PV0LGU Arachis hypogaea HOM05D003796 ORTHO05D004486 4.4e-15 86.3 136 33.1
Rhsim02G0083600 Rhododendron simsii HOM05D003796 ORTHO05D004486 1.3e-14 84.7 165 28.5
FAN21G0866 Fragaria x ananassa HOM05D003796 ORTHO05D004486 1.7e-14 84.3 146 33.6
Oeu020812.1 Olea europaea HOM05D003796 ORTHO05D004486 1.8e-13 80.9 86 44.2
Peaxi162Scf00568g00059 Petunia axillaris HOM05D003796 ORTHO05D011410 4.1e-13 79.7 160 30.0
Gorai.005G124300 Gossypium raimondii HOM05D003796 ORTHO05D004486 5.9e-12 75.9 116 32.8
QL10p054541 Quercus lobata HOM05D003796 ORTHO05D004486 5.9e-12 75.9 204 25.5
FAN11G2235 Fragaria x ananassa HOM05D003796 ORTHO05D004486 8.5e-11 72.0 191 26.7
QL10p053319 Quercus lobata HOM05D003796 ORTHO05D004486 1.5e-10 71.2 269 23.4
Nitab4.5_0000504g0010 Nicotiana tabacum HOM05D003796 ORTHO05D004486 5.5e-10 69.3 118 30.5
QL10p054574 Quercus lobata HOM05D003796 ORTHO05D004486 5.5e-10 69.3 71 56.3
QL93p1902_0789 Quercus lobata HOM05D003796 ORTHO05D004486 5.5e-10 69.3 71 56.3
FvH4_3g24770 Fragaria vesca HOM05D003796 ORTHO05D004486 2.2e-06 57.4 86 39.5
Haze_01372 Corylus avellana HOM05D003796 ORTHO05D004486 2.8e-06 57.0 103 31.1


User provided reference genes

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