Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g23085_MAGBIO Magnolia biondii HOM05D005723 ORTHO05D005968 3.5e-158 561.6 288 100.0
CDE05G2791 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 9.0e-106 387.5 286 69.9
CDE05G1067 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 2.2e-96 356.3 286 65.7
ATR0807G138 Amborella trichopoda HOM05D005723 ORTHO05D005968 6.7e-93 344.7 258 66.3
MD12G1056700 Malus domestica HOM05D005723 ORTHO05D005968 1.1e-92 344.0 243 68.7
TAR623G0918 Trochodendron aralioides HOM05D005723 ORTHO05D005968 2.1e-91 339.7 296 62.2
Prupe.7G077500 Prunus persica HOM05D005723 ORTHO05D005968 4.8e-91 338.6 209 75.6
Cfa020161 Carpinus fangiana HOM05D005723 ORTHO05D005968 1.4e-90 337.0 263 64.6
Potri.016G045300 Populus trichocarpa HOM05D005723 ORTHO05D005968 4.0e-90 335.5 209 75.6
Lju124A25G33 Lonicera japonica HOM05D005723 ORTHO05D005968 6.9e-90 334.7 209 75.1
CiPaw.09G030000 Carya illinoinensis HOM05D005723 ORTHO05D005968 1.5e-89 333.6 261 64.8
Sc13g0002300 Simmondsia chinensis HOM05D005723 ORTHO05D005968 3.4e-89 332.4 263 63.5
Sabra06G0148000 Salix brachista HOM05D005723 ORTHO05D005968 5.8e-89 331.6 209 75.1
Zm00001eb320790 Zea mays HOM05D005723 ORTHO05D005968 5.8e-89 331.6 207 74.9
Potri.006G192800 Populus trichocarpa HOM05D005723 ORTHO05D005968 1.7e-88 330.1 262 63.7
FAN14G2504 Fragaria x ananassa HOM05D005723 ORTHO05D005968 2.2e-88 329.7 209 74.6
Actinidia17274 Actinidia chinensis HOM05D005723 ORTHO05D005968 2.9e-88 329.3 233 69.1
Sopen03g015150 Solanum pennellii HOM05D005723 ORTHO05D005968 2.9e-88 329.3 291 59.1
FAN02G2166 Fragaria x ananassa HOM05D005723 ORTHO05D005968 6.5e-88 328.2 209 75.1
RcHm_v2.0_Chr3g0479531 Rosa chinensis HOM05D005723 ORTHO05D005968 1.9e-87 326.6 207 73.4
Solyc03g062830.3 Solanum lycopersicum HOM05D005723 ORTHO05D005968 3.2e-87 325.9 291 58.8
Hma1.2p1_0648F.1_g195110 Hydrangea macrophylla HOM05D005723 ORTHO05D005968 4.2e-87 325.5 209 73.2
Zm00001eb104410 Zea mays HOM05D005723 ORTHO05D005968 4.2e-87 325.5 229 72.9
CANSAT64G2568 Cannabis sativa HOM05D005723 ORTHO05D005968 5.5e-87 325.1 244 66.4
QL07p023897 Quercus lobata HOM05D005723 ORTHO05D005968 5.5e-87 325.1 196 79.6
Atru.chr8.1119 Acer truncatum HOM05D005723 ORTHO05D005968 9.3e-87 324.3 261 61.7
Manes.08G043200 Manihot esculenta HOM05D005723 ORTHO05D005968 1.6e-86 323.6 209 73.2
Peaxi162Scf00258g00623 Petunia axillaris HOM05D005723 ORTHO05D005968 2.7e-86 322.8 298 58.7
Thhalv10017043m.g Eutrema salsugineum HOM05D005723 ORTHO05D005968 4.6e-86 322.0 246 64.2
HanXRQChr13g0390481 Helianthus annuus HOM05D005723 ORTHO05D005968 4.6e-86 322.0 237 65.4
Nitab4.5_0000324g0030 Nicotiana tabacum HOM05D005723 ORTHO05D005968 4.6e-86 322.0 197 75.6
THA.LOC104802583 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 4.6e-86 322.0 261 61.7
EL10Ac3g06909 Beta vulgaris HOM05D005723 ORTHO05D005968 6.0e-86 321.6 249 65.9
HPP92_009024 Vanilla planifolia HOM05D005723 ORTHO05D005968 7.9e-86 321.2 196 75.5
Ah.04g152500 Amaranthus hybridus HOM05D005723 ORTHO05D005968 1.0e-85 320.9 197 75.1
Aa31LG1G24130 Aethionema arabicum HOM05D005723 ORTHO05D005968 1.3e-85 320.5 195 75.4
MELO3C009621.2 Cucumis melo HOM05D005723 ORTHO05D005968 1.3e-85 320.5 207 72.5
Ca_08526_v3 Cicer arietinum L. HOM05D005723 ORTHO05D005968 5.1e-85 318.5 278 58.3
Psat3g068400 Pisum sativum HOM05D005723 ORTHO05D005968 5.1e-85 318.5 286 57.0
Sed0013306 Sechium edule HOM05D005723 ORTHO05D005968 6.7e-85 318.2 207 71.0
Nn2g15696 Nelumbo nucifera HOM05D005723 ORTHO05D005968 1.1e-84 317.4 302 57.9
Medtr7g093280 Medicago truncatula HOM05D005723 ORTHO05D005968 1.5e-84 317.0 247 63.2
Aqoxy1G00026 Aquilegia oxysepala HOM05D005723 ORTHO05D005968 2.5e-84 316.2 202 72.3
AL4G40430 Arabidopsis lyrata HOM05D005723 ORTHO05D005968 2.5e-84 316.2 241 63.5
CARHR137150 Cardamine hirsuta HOM05D005723 ORTHO05D005968 2.5e-84 316.2 231 65.8
Gohir.A09G128200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 2.5e-84 316.2 195 75.9
TWI53G1132 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 2.5e-84 316.2 204 74.5
Thecc.05G171800 Theobroma cacao HOM05D005723 ORTHO05D005968 4.3e-84 315.5 197 75.1
GSVIVG01033492001 Vitis vinifera HOM05D005723 ORTHO05D005968 4.3e-84 315.5 205 73.7
A05p02710 Brassica napus HOM05D005723 ORTHO05D005968 5.7e-84 315.1 248 63.3
AT2G42070 Arabidopsis thaliana HOM05D005723 ORTHO05D005968 7.4e-84 314.7 195 74.4
TPR.G18229 Trifolium pratense HOM05D005723 ORTHO05D005968 1.3e-83 313.9 247 62.8
Migut.K00036 Erythranthe guttata HOM05D005723 ORTHO05D005968 1.6e-83 313.5 207 69.6
Phvul.001G142700 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 1.6e-83 313.5 280 57.5
Hund24799 Selenicereus undatus HOM05D005723 ORTHO05D005968 1.6e-83 313.5 269 63.6
THA.LOC104824477 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 2.1e-83 313.2 278 58.6
Carub.0004s2440 Capsella rubella HOM05D005723 ORTHO05D005968 3.7e-83 312.4 195 73.8
BcaB01g03439 Brassica carinata HOM05D005723 ORTHO05D005968 8.2e-83 311.2 202 71.8
BraA05t19263Z Brassica rapa HOM05D005723 ORTHO05D005968 8.2e-83 311.2 195 74.9
Cc06_g15920 Coffea canephora HOM05D005723 ORTHO05D005968 8.2e-83 311.2 204 71.6
Gohir.D09G124200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 8.2e-83 311.2 195 74.9
VMungo1383G0807 Vigna mungo HOM05D005723 ORTHO05D005968 8.2e-83 311.2 271 57.9
Glyma.19G148100 Glycine max HOM05D005723 ORTHO05D005968 1.4e-82 310.5 209 69.4
A03p23560 Brassica napus HOM05D005723 ORTHO05D005968 2.4e-82 309.7 202 71.3
BraA03t11573Z Brassica rapa HOM05D005723 ORTHO05D005968 2.4e-82 309.7 202 71.3
BcaNung04410 Brassica carinata HOM05D005723 ORTHO05D005968 3.1e-82 309.3 195 73.8
Glyma.09G111000 Glycine max HOM05D005723 ORTHO05D005968 3.1e-82 309.3 210 69.5
Phvul.007G260200 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 3.1e-82 309.3 210 70.0
C04p03240 Brassica napus HOM05D005723 ORTHO05D005968 4.1e-82 308.9 195 73.8
COL.COLO4_33978 Corchorus olitorius HOM05D005723 ORTHO05D005968 4.1e-82 308.9 195 74.4
Gorai.006G143000 Gossypium raimondii HOM05D005723 ORTHO05D005968 4.1e-82 308.9 196 75.0
Lalb_Chr18g0047891 Lupinus albus HOM05D005723 ORTHO05D005968 4.1e-82 308.9 198 71.7
BcaC02g12456 Brassica carinata HOM05D005723 ORTHO05D005968 5.3e-82 308.5 195 73.8
BolC4t21962H Brassica oleracea HOM05D005723 ORTHO05D005968 5.3e-82 308.5 195 73.8
Lj1g0008741 Lotus japonicus HOM05D005723 ORTHO05D005968 9.0e-82 307.8 236 63.6
SGA_v2.0_scaffold274G46488 Striga asiatica HOM05D005723 ORTHO05D005968 1.5e-81 307.0 233 63.9
BcaC01g05310 Brassica carinata HOM05D005723 ORTHO05D005968 2.6e-81 306.2 202 70.3
VMungo0720G2417 Vigna mungo HOM05D005723 ORTHO05D005968 3.4e-81 305.8 210 69.0
BolC3t15179H Brassica oleracea HOM05D005723 ORTHO05D005968 1.3e-80 303.9 202 69.8
PSO384G0309 Papaver somniferum HOM05D005723 ORTHO05D005968 2.9e-80 302.8 241 59.3
Pp3c12_9930 Physcomitrium patens HOM05D005723 ORTHO05D005968 2.9e-80 302.8 200 71.5
FvH4_6g22180 Fragaria vesca HOM05D005723 ORTHO05D005968 3.8e-80 302.4 219 68.0
MD14G1055000 Malus domestica HOM05D005723 ORTHO05D005968 3.8e-80 302.4 231 62.8
PSO339G0271 Papaver somniferum HOM05D005723 ORTHO05D005968 1.1e-79 300.8 242 58.7
FAN05G3703 Fragaria x ananassa HOM05D005723 ORTHO05D005968 4.2e-79 298.9 189 75.7
Ciclev10013558m.g Citrus clementina HOM05D005723 ORTHO05D005968 2.1e-78 296.6 244 61.9
ClCG10G017570 Citrullus lanatus HOM05D005723 ORTHO05D005968 3.6e-78 295.8 207 69.6
Rhsim04G0096600 Rhododendron simsii HOM05D005723 ORTHO05D005968 3.6e-78 295.8 238 64.3
Lsat_1_v5_gn_5_163580 Lactuca sativa HOM05D005723 ORTHO05D005968 2.3e-77 293.1 290 55.2
PGR142G4063 Punica granatum HOM05D005723 ORTHO05D005968 2.3e-77 293.1 192 72.9
Oeu024483.2 Olea europaea HOM05D005723 ORTHO05D005968 7.4e-76 288.1 176 77.3
Duzib093G0286 Durio zibethinus HOM05D005723 ORTHO05D005968 3.7e-75 285.8 189 72.5
MSTRG.6477 Avicennia marina HOM05D005723 ORTHO05D005968 4.8e-75 285.4 206 67.5
Glyma.03G145000 Glycine max HOM05D005723 ORTHO05D005968 6.3e-75 285.0 189 70.9
arahy.Tifrunner.gnm1.ann1.USMU0G Arachis hypogaea HOM05D005723 ORTHO05D005968 1.2e-73 280.8 177 74.0
Sp4g24280 Schrenkiella parvula HOM05D005723 ORTHO05D005968 2.0e-73 280.0 249 57.8
Dinv14303 Davidia involucrata HOM05D005723 ORTHO05D005968 7.7e-73 278.1 240 61.7
DCAR_019848 Daucus carota HOM05D005723 ORTHO05D005968 2.2e-72 276.6 255 57.6
Nitab4.5_0002488g0020 Nicotiana tabacum HOM05D005723 ORTHO05D005968 2.2e-72 276.6 193 69.9
SMO358G0738 Selaginella moellendorffii HOM05D005723 ORTHO05D005968 2.5e-71 273.1 197 65.5
C03p28100 Brassica napus HOM05D005723 ORTHO05D005968 6.1e-70 268.5 184 70.1
AUR62015361 Chenopodium quinoa HOM05D005723 ORTHO05D005968 6.7e-69 265.0 163 77.9
CsaV3_3G038770 Cucumis sativus L. HOM05D005723 ORTHO05D005968 2.2e-67 260.0 169 73.4
SalBow1G1145 Salvia bowleyana HOM05D005723 ORTHO05D005968 3.7e-67 259.2 195 66.2
Cpa.g.sc85.50 Carica papaya HOM05D005723 ORTHO05D005968 6.3e-67 258.5 157 78.3
Oeu034265.1 Olea europaea HOM05D005723 ORTHO05D005968 2.0e-65 253.4 156 77.6
HanXRQChr01g0009761 Helianthus annuus HOM05D005723 ORTHO05D005968 2.6e-65 253.1 159 73.0
ECA248G2266 Erigeron canadensis HOM05D005723 ORTHO05D005968 5.0e-64 248.8 159 72.3
AUR62012024 Chenopodium quinoa HOM05D005723 ORTHO05D005968 1.4e-63 247.3 150 78.0
SEGI_25574 Sequoiadendron giganteum HOM05D005723 ORTHO05D005968 3.6e-62 242.7 138 83.3
Cre06.g285200 Chlamydomonas reinhardtii HOM05D005723 ORTHO05D005968 7.4e-60 235.0 242 48.3
arahy.Tifrunner.gnm1.ann1.4E6ATU Arachis hypogaea HOM05D005723 ORTHO05D005968 3.5e-57 226.1 184 62.5
arahy.Tifrunner.gnm1.ann1.WEU379 Arachis hypogaea HOM05D005723 ORTHO05D005968 5.2e-53 212.2 237 49.4
unitig_748.g7589 Utricularia gibba HOM05D005723 ORTHO05D005968 1.5e-52 210.7 141 70.9
PRCOL_00004505 Prasinoderma coloniale HOM05D005723 ORTHO05D005968 6.3e-51 205.3 202 47.5
Actinidia38586 Actinidia chinensis HOM05D005723 ORTHO05D005968 1.7e-48 197.2 159 64.2
Haze_19996 Corylus avellana HOM05D005723 ORTHO05D005968 2.2e-48 196.8 124 79.0
Os09g0553300 Oryza sativa ssp. japonica HOM05D005723 ORTHO05D005968 8.5e-48 194.9 113 77.9
HPP92_009080 Vanilla planifolia HOM05D005723 ORTHO05D005968 1.5e-47 194.1 115 75.7
MSTRG.10844 Avicennia marina HOM05D005723 ORTHO05D005968 1.0e-45 188.0 124 75.8
TWI74G1261 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 5.2e-45 185.7 211 52.1
Mapoly0013s0082 Marchantia polymorpha HOM05D005723 ORTHO05D005968 1.2e-44 184.5 127 67.7
Sed0026560 Sechium edule HOM05D005723 ORTHO05D005968 2.2e-43 180.3 202 49.0
AagrBONN_evm.TU.Sc2ySwM_117.3227 Anthoceros agrestis HOM05D005723 ORTHO05D005968 3.5e-41 172.9 112 68.8
arahy.Tifrunner.gnm1.ann1.HLHI9C Arachis hypogaea HOM05D005723 ORTHO05D005968 5.5e-39 165.6 119 69.7
C05p20370 Brassica napus HOM05D005723 ORTHO05D005968 5.7e-36 155.6 115 70.4
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 5.7e-36 155.6 115 70.4
CBR_g29504 Chara braunii HOM05D005723 ORTHO05D005968 1.7e-32 144.1 153 44.4
Pp3c3_14150 Physcomitrium patens HOM05D005723 ORTHO05D005968 5.0e-32 142.5 161 49.1
Gohir.A10G137800 Gossypium hirsutum HOM05D005723 ORTHO05D005968 1.4e-26 124.4 90 72.2
Gohir.A13G075901 Gossypium hirsutum HOM05D005723 ORTHO05D005968 2.5e-23 113.6 78 71.8
BolC3t15180H Brassica oleracea HOM05D005723 ORTHO05D005968 5.8e-20 102.4 82 65.9
BcaC05g26057 Brassica carinata HOM05D005723 ORTHO05D005968 1.9e-15 87.4 61 68.9
MCO15G614 Micromonas commoda HOM05D005723 ORTHO05D005968 3.6e-14 83.2 164 32.9
vmacro09121 Vaccinium macrocarpon HOM05D005723 ORTHO05D005968 1.5e-12 77.8 108 44.4
Haze_19995 Corylus avellana HOM05D005723 ORTHO05D005968 7.1e-10 68.9 39 71.8


User provided reference genes

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