Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 0.0e+00 1156.7 604 100.0
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 5.1e-127 459.1 598 47.5
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 1.4e-108 397.9 602 43.0
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 5.3e-108 396.0 608 43.3
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 9.0e-108 395.2 609 43.7
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 9.3e-105 385.2 608 41.9
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 3.0e-103 380.2 635 40.3
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 9.7e-102 375.2 607 41.5
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.3e-101 374.8 608 40.6
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 2.8e-101 373.6 600 40.5
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.2e-99 368.2 614 41.0
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.4e-99 366.7 614 41.5
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.9e-99 365.9 614 41.7
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.7e-98 364.4 612 42.3
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 3.8e-98 363.2 607 41.0
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 1.1e-97 361.7 609 40.6
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 4.2e-97 359.8 545 42.0
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 6.1e-96 355.9 607 40.4
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 2.3e-95 354.0 625 39.8
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 6.7e-95 352.4 631 38.8
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 2.4e-92 344.0 603 39.0
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 1.7e-90 337.8 613 38.3
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 2.2e-90 337.4 630 38.3
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 3.8e-90 336.7 607 39.4
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 6.5e-90 335.9 604 39.2
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 5.5e-89 332.8 612 39.2
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 2.7e-88 330.5 669 37.2
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 4.7e-88 329.7 602 38.7
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 7.9e-88 328.9 663 36.5
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.4e-87 328.2 610 39.7
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 3.0e-87 327.0 600 37.8
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 3.9e-87 326.6 606 38.4
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 8.8e-87 325.5 650 37.4
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.1e-86 325.1 606 38.4
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 5.7e-86 322.8 610 38.2
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 1.7e-85 321.2 608 37.8
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 2.2e-85 320.9 599 37.7
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 4.8e-85 319.7 619 39.4
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 5.3e-84 316.2 605 38.2
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 1.5e-83 314.7 613 38.5
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 1.5e-83 314.7 602 37.9
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.5e-83 314.7 608 38.0
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.0e-83 314.3 650 36.0
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 4.5e-83 313.2 605 40.5
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 4.5e-83 313.2 609 37.3
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 1.7e-82 311.2 643 37.0
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 2.2e-82 310.8 600 37.2
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.9e-81 307.8 657 35.5
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 5.5e-81 306.2 599 37.2
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 7.2e-81 305.8 541 40.3
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 9.4e-81 305.4 604 37.3
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 2.7e-80 303.9 668 35.8
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 3.3e-78 297.0 612 37.6
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.3e-77 295.0 607 36.4
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 1.7e-77 294.7 608 37.5
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 2.8e-77 293.9 609 36.1
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.7e-77 293.5 623 38.0
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 8.2e-77 292.4 649 34.5
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 1.1e-76 292.0 607 37.6
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.4e-76 290.8 598 35.8
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 9.1e-76 288.9 476 39.9
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.2e-75 288.5 579 37.3
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 2.6e-75 287.3 618 36.7
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 3.5e-75 287.0 602 35.5
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 8.5e-74 282.3 609 36.1
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 4.2e-73 280.0 629 36.7
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 5.5e-73 279.6 608 36.3
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 4.7e-72 276.6 605 34.9
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 4.0e-71 273.5 609 35.5
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 6.8e-71 272.7 611 36.2
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 2.6e-70 270.8 645 36.0
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.6e-70 270.8 616 34.7
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.4e-68 265.0 485 39.2
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 3.1e-68 263.8 472 39.2
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 3.1e-68 263.8 607 35.1
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 5.5e-65 253.1 479 39.0
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 1.7e-61 241.5 475 37.1
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 2.2e-61 241.1 606 33.7
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 3.7e-61 240.4 485 38.4
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.6e-56 224.9 439 38.3
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 7.3e-49 199.5 521 33.0
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 2.5e-41 174.5 231 46.8
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 9.5e-41 172.6 432 35.9
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 4.1e-36 157.1 173 51.4
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.5e-33 147.9 454 30.0
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 4.7e-32 143.7 358 34.4
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.5e-30 138.7 574 27.2
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 4.4e-30 137.1 555 28.8
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.3e-29 135.6 65 98.5
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 9.2e-28 129.4 170 47.1
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 4.6e-27 127.1 174 43.7
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 4.6e-27 127.1 174 43.7
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 8.6e-26 122.9 567 26.8
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.8e-23 115.2 165 43.0
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 5.2e-23 113.6 279 33.7
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 5.8e-14 83.6 185 33.0
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 3.5e-11 74.3 506 22.5
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.9e-09 68.6 381 26.8
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.1e-08 65.1 87 41.4
Os09g0482000 Oryza sativa ssp. japonica HOM05D002436 ORTHO05D002754 2.0e-06 58.5 70 38.6
Lj9A445T79 Lonicera japonica HOM05D002436 ORTHO05D002754 9.9e-06 56.2 107 29.9
Hund09454 Selenicereus undatus HOM05D002436 ORTHO05D002754 9.9e-06 56.2 91 31.9


User provided reference genes

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