Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.9e-107 392.5 193 100.0
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 4.8e-87 324.7 193 87.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 2.9e-52 209.1 193 57.5
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.3e-47 193.7 193 52.8
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 5.3e-46 188.3 193 52.3
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 7.0e-46 188.0 192 55.7
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 1.2e-45 187.2 193 54.4
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 2.0e-45 186.4 193 53.9
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 5.9e-45 184.9 193 52.8
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 5.0e-44 181.8 192 53.6
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 6.5e-44 181.4 193 51.3
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 8.5e-44 181.0 189 54.5
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.1e-43 180.6 188 53.7
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 4.2e-43 178.7 193 52.3
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 5.5e-43 178.3 193 50.3
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 5.5e-43 178.3 195 52.8
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 2.1e-42 176.4 194 50.5
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 1.0e-41 174.1 193 51.3
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.4e-41 173.7 198 48.5
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 3.0e-41 172.6 193 48.7
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 3.0e-41 172.6 199 50.3
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 4.0e-41 172.2 193 49.7
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 5.2e-41 171.8 199 49.2
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 5.2e-41 171.8 199 49.2
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 6.8e-41 171.4 198 51.0
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 1.5e-40 170.2 193 47.2
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.5e-40 170.2 193 50.3
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.5e-40 170.2 188 47.9
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 2.0e-40 169.9 193 49.7
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 2.6e-40 169.5 188 48.9
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 2.6e-40 169.5 188 48.9
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 3.4e-40 169.1 193 50.3
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 5.7e-40 168.3 193 49.7
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.7e-39 166.8 193 47.7
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 2.2e-39 166.4 193 48.2
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 2.2e-39 166.4 184 50.0
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 2.8e-39 166.0 193 46.6
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 3.7e-39 165.6 193 49.2
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 3.7e-39 165.6 193 49.2
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.7e-39 165.6 188 47.3
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 4.9e-39 165.2 194 49.5
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.4e-38 163.7 193 48.7
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.4e-38 163.7 193 47.7
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.4e-38 163.7 188 48.4
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 1.4e-38 163.7 188 48.4
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.4e-38 163.7 202 49.0
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 2.4e-38 162.9 193 46.1
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 4.1e-38 162.2 199 48.7
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 5.4e-38 161.8 197 48.2
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 9.1e-38 161.0 210 44.8
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 9.1e-38 161.0 202 47.0
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 9.1e-38 161.0 202 47.0
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 9.1e-38 161.0 193 47.7
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.2e-37 160.6 193 47.7
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.6e-37 160.2 193 47.7
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.6e-37 160.2 193 46.6
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 2.0e-37 159.8 192 46.9
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.0e-37 159.8 193 46.1
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 2.7e-37 159.5 193 48.7
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 3.5e-37 159.1 181 47.5
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 3.5e-37 159.1 187 47.6
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 4.5e-37 158.7 193 47.2
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 4.5e-37 158.7 193 47.2
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 4.5e-37 158.7 193 43.5
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 5.9e-37 158.3 200 49.0
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 7.7e-37 157.9 197 46.2
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 7.7e-37 157.9 193 47.7
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 7.7e-37 157.9 193 47.2
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.0e-36 157.5 194 46.4
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.3e-36 157.1 193 47.7
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.3e-36 157.1 195 45.1
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 1.7e-36 156.8 193 45.6
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 1.7e-36 156.8 193 44.6
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 2.3e-36 156.4 193 47.7
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 2.9e-36 156.0 182 48.9
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 5.0e-36 155.2 193 45.1
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 5.0e-36 155.2 202 45.5
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 6.6e-36 154.8 193 46.6
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 1.1e-35 154.1 197 45.7
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 1.5e-35 153.7 193 45.1
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 3.3e-35 152.5 193 46.6
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 4.2e-35 152.1 190 45.8
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 7.2e-35 151.4 192 42.7
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 9.5e-35 151.0 199 45.7
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.6e-34 150.2 240 40.0
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 1.6e-34 150.2 193 43.0
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 2.1e-34 149.8 196 41.3
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 2.8e-34 149.4 183 46.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 3.6e-34 149.1 196 41.3
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 4.7e-34 148.7 192 42.2
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 2.3e-33 146.4 194 44.8
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 6.8e-33 144.8 193 42.0
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 8.9e-33 144.4 193 44.6
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.5e-32 143.7 194 43.3
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 4.9e-31 138.7 193 42.5
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 8.3e-31 137.9 193 40.4
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.1e-25 119.4 111 55.9
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.5e-24 117.1 108 56.5
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.6e-24 116.3 108 58.3
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 6.4e-23 111.7 177 41.2
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 5.4e-22 108.6 195 35.4
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.2e-18 97.4 200 35.5
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 4.7e-18 95.5 73 64.4
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 8.3e-15 84.7 111 40.5
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 6.6e-12 75.1 113 40.7
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.5e-11 73.9 56 58.9
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 2.1e-10 70.1 104 37.5
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 8.1e-10 68.2 85 43.5
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.7e-07 60.5 89 42.7
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.7e-07 60.5 125 34.4
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 4.9e-07 58.9 85 41.2
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 4.9e-07 58.9 85 41.2
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.4e-06 56.6 85 40.0
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 3.2e-06 56.2 135 29.6
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 5.4e-06 55.5 136 31.6
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 9.2e-06 54.7 85 40.0
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 9.2e-06 54.7 85 38.8


User provided reference genes

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