Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g06420_MAGBIO Magnolia biondii HOM05D003331 ORTHO05D003264 6.9e-128 460.7 238 100.0
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 4.4e-34 149.1 227 48.9
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 1.3e-33 147.5 184 52.2
CiPaw.08G127600 Carya illinoinensis HOM05D003331 ORTHO05D003264 1.7e-33 147.1 201 48.3
TAR628G1529 Trochodendron aralioides HOM05D003331 ORTHO05D003264 2.2e-33 146.7 200 48.0
Nn2g14480 Nelumbo nucifera HOM05D003331 ORTHO05D003264 1.2e-31 141.0 206 47.1
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 1.3e-30 137.5 219 52.1
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 3.0e-30 136.3 239 48.1
Sabra05G0089800 Salix brachista HOM05D003331 ORTHO05D003264 6.6e-30 135.2 236 47.9
Manes.02G109000 Manihot esculenta HOM05D003331 ORTHO05D003264 2.8e-28 129.8 225 44.0
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 6.2e-28 128.6 232 47.4
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 2.4e-27 126.7 186 46.8
Cfa007016 Carpinus fangiana HOM05D003331 ORTHO05D003264 3.1e-27 126.3 210 48.6
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 4.0e-27 125.9 215 46.5
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 5.8e-26 122.1 197 46.7
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 1.7e-25 120.6 192 45.8
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 3.8e-25 119.4 191 44.5
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.4e-24 117.5 203 43.3
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 2.4e-24 116.7 187 47.1
QL02p012465 Quercus lobata HOM05D003331 ORTHO05D003264 3.2e-24 116.3 221 38.9
Haze_03715 Corylus avellana HOM05D003331 ORTHO05D003264 1.6e-23 114.0 209 46.9
Gohir.A11G172900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.6e-23 114.0 182 45.1
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 1.6e-23 114.0 183 45.4
Haze_22676 Corylus avellana HOM05D003331 ORTHO05D003264 2.1e-23 113.6 223 42.6
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 2.7e-23 113.2 199 44.2
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 1.3e-22 110.9 204 42.6
CANSAT01G0941 Cannabis sativa HOM05D003331 ORTHO05D003264 1.7e-22 110.5 203 43.3
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.7e-22 110.5 186 43.0
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 3.9e-22 109.4 236 40.3
Dinv08561 Davidia involucrata HOM05D003331 ORTHO05D003264 5.1e-22 109.0 202 42.1
Aqoxy6G02126 Aquilegia oxysepala HOM05D003331 ORTHO05D003264 6.6e-22 108.6 209 42.6
Cfa013989 Carpinus fangiana HOM05D003331 ORTHO05D003264 8.7e-22 108.2 215 43.7
Hma1.2p1_0561F.1_g178920 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 1.5e-21 107.5 177 45.8
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 3.3e-21 106.3 198 43.4
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 3.3e-21 106.3 201 41.3
Sabra05G0188500 Salix brachista HOM05D003331 ORTHO05D003264 5.6e-21 105.5 225 42.7
A08p21610 Brassica napus HOM05D003331 ORTHO05D003264 3.6e-20 102.8 225 40.9
BraA08t34108Z Brassica rapa HOM05D003331 ORTHO05D003264 3.6e-20 102.8 225 40.9
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.6e-20 102.8 201 42.3
Manes.18G012121 Manihot esculenta HOM05D003331 ORTHO05D003264 3.6e-20 102.8 182 42.9
Gohir.D05G187300 Gossypium hirsutum HOM05D003331 ORTHO05D003264 6.2e-20 102.1 185 44.9
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 6.2e-20 102.1 235 40.0
Hund16511 Selenicereus undatus HOM05D003331 ORTHO05D003264 8.1e-20 101.7 205 42.9
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 8.1e-20 101.7 237 40.5
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.4e-19 100.9 187 44.4
Nitab4.5_0001789g0110 Nicotiana tabacum HOM05D003331 ORTHO05D003264 1.4e-19 100.9 199 41.2
Aa31LG6G12860 Aethionema arabicum HOM05D003331 ORTHO05D003264 3.1e-19 99.8 188 41.5
CAN.G225.18 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-19 99.4 223 41.3
THA.LOC104807508 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 4.0e-19 99.4 198 42.4
THA.LOC104819740 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 4.0e-19 99.4 216 42.6
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.2e-18 97.8 194 42.8
BcaC01g00527 Brassica carinata HOM05D003331 ORTHO05D003264 1.5e-18 97.4 227 40.5
FAN23G2926 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.0e-18 97.1 239 40.6
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 2.0e-18 97.1 185 40.0
Prupe.7G173300 Prunus persica HOM05D003331 ORTHO05D003264 2.0e-18 97.1 255 40.4
BolC3t20356H Brassica oleracea HOM05D003331 ORTHO05D003264 2.6e-18 96.7 228 40.4
C03p80970 Brassica napus HOM05D003331 ORTHO05D003264 3.4e-18 96.3 228 40.4
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 3.4e-18 96.3 185 39.5
Thhalv10025822m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 5.8e-18 95.5 212 41.0
PSO541G2637 Papaver somniferum HOM05D003331 ORTHO05D003264 7.6e-18 95.1 273 38.8
MD02G1125100 Malus domestica HOM05D003331 ORTHO05D003264 9.9e-18 94.7 237 37.1
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 1.3e-17 94.4 226 41.2
Cpa.g.sc26.287 Carica papaya HOM05D003331 ORTHO05D003264 1.3e-17 94.4 217 41.0
FvH4_1g11270 Fragaria vesca HOM05D003331 ORTHO05D003264 2.2e-17 93.6 217 39.6
FAN26G3159 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.2e-17 93.6 243 39.1
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 2.9e-17 93.2 233 36.9
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 4.9e-17 92.4 199 38.7
Psat2g152560 Pisum sativum HOM05D003331 ORTHO05D003264 4.9e-17 92.4 192 41.7
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 4.9e-17 92.4 230 41.3
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 8.4e-17 91.7 199 38.2
Lalb_Chr09g0321511 Lupinus albus HOM05D003331 ORTHO05D003264 8.4e-17 91.7 181 39.8
Cc07_g11170 Coffea canephora HOM05D003331 ORTHO05D003264 1.1e-16 91.3 226 41.6
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 1.1e-16 91.3 194 39.7
BcaNung04885 Brassica carinata HOM05D003331 ORTHO05D003264 1.4e-16 90.9 189 39.2
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 1.4e-16 90.9 211 37.4
PSO675G4415 Papaver somniferum HOM05D003331 ORTHO05D003264 1.4e-16 90.9 274 38.7
GSVIVG01006332001 Vitis vinifera HOM05D003331 ORTHO05D003264 1.4e-16 90.9 169 39.1
BcaNung00784 Brassica carinata HOM05D003331 ORTHO05D003264 1.9e-16 90.5 240 35.8
C01p03140 Brassica napus HOM05D003331 ORTHO05D003264 1.9e-16 90.5 240 35.8
Atru.chr13.244 Acer truncatum HOM05D003331 ORTHO05D003264 2.4e-16 90.1 218 37.2
Dinv40128 Davidia involucrata HOM05D003331 ORTHO05D003264 3.2e-16 89.7 107 53.3
ATR0180G005 Amborella trichopoda HOM05D000531 ORTHO05D003264 4.2e-16 89.4 229 38.9
FAN28G0558 Fragaria x ananassa HOM05D003331 ORTHO05D003264 4.2e-16 89.4 238 39.5
VMungo1215G2112 Vigna mungo HOM05D003331 ORTHO05D003264 4.2e-16 89.4 175 40.6
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 5.4e-16 89.0 239 37.7
FAN19G3075 Fragaria x ananassa HOM05D003331 ORTHO05D003264 5.4e-16 89.0 246 39.4
RcHm_v2.0_Chr2g0098731 Rosa chinensis HOM05D003331 ORTHO05D003264 5.4e-16 89.0 235 38.3
MD15G1240800 Malus domestica HOM05D003331 ORTHO05D003264 9.3e-16 88.2 204 38.7
Eucgr.J02482 Eucalyptus grandis HOM05D003331 ORTHO05D003264 1.2e-15 87.8 184 44.0
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 1.6e-15 87.4 211 38.4
Medtr5g022780 Medicago truncatula HOM05D003331 ORTHO05D003264 2.1e-15 87.0 190 40.5
Sopen02g012950 Solanum pennellii HOM05D003331 ORTHO05D003264 2.1e-15 87.0 197 38.6
BolC1t00299H Brassica oleracea HOM05D003331 ORTHO05D003264 3.5e-15 86.3 238 35.7
CiPaw.08G068400 Carya illinoinensis HOM05D003331 ORTHO05D003264 3.5e-15 86.3 209 35.9
AT4G35900 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 7.9e-15 85.1 193 38.9
Peaxi162Scf00328g00414 Petunia axillaris HOM05D003331 ORTHO05D003264 7.9e-15 85.1 227 37.0
Ciclev10003845m.g Citrus clementina HOM05D003331 ORTHO05D003264 1.0e-14 84.7 205 40.0
Rhsim08G0031400 Rhododendron simsii HOM05D003331 ORTHO05D003264 1.3e-14 84.3 177 40.1
Oeu020389.1 Olea europaea HOM05D003331 ORTHO05D003264 1.8e-14 84.0 179 42.5
Rhsim10G0207400 Rhododendron simsii HOM05D003331 ORTHO05D003264 1.8e-14 84.0 182 37.9
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 2.3e-14 83.6 204 37.7
Phvul.002G105700 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 3.0e-14 83.2 175 38.9
AT2G17770 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 3.9e-14 82.8 192 37.0
Oeu012566.1 Olea europaea HOM05D003331 ORTHO05D003264 3.9e-14 82.8 181 40.3
FvH4_2g38080 Fragaria vesca HOM05D003331 ORTHO05D003264 5.1e-14 82.4 199 37.2
Nitab4.5_0002337g0180 Nicotiana tabacum HOM05D003331 ORTHO05D003264 5.1e-14 82.4 189 39.7
A01p02810 Brassica napus HOM05D003331 ORTHO05D003264 6.7e-14 82.0 180 40.0
BraA01t00264Z Brassica rapa HOM05D003331 ORTHO05D003264 6.7e-14 82.0 180 40.0
Prupe.1G361100 Prunus persica HOM05D003331 ORTHO05D003264 1.1e-13 81.3 203 38.9
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 1.9e-13 80.5 189 36.5
C07p61400 Brassica napus HOM05D003331 ORTHO05D003264 2.5e-13 80.1 239 37.2
BolC7t46566H Brassica oleracea HOM05D003331 ORTHO05D003264 3.3e-13 79.7 236 36.4
Nitab4.5_0000188g0190 Nicotiana tabacum HOM05D003331 ORTHO05D003264 3.3e-13 79.7 184 36.4
MELO3C013748.2 Cucumis melo HOM05D003331 ORTHO05D003264 5.6e-13 79.0 194 37.6
Carub.0007s0433 Capsella rubella HOM05D003331 ORTHO05D003264 7.4e-13 78.6 186 37.1
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 7.4e-13 78.6 187 36.9
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 7.4e-13 78.6 186 36.6
CARHR108160 Cardamine hirsuta HOM05D003331 ORTHO05D003264 9.6e-13 78.2 185 35.1
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 9.6e-13 78.2 196 34.7
CsaV3_3G000600 Cucumis sativus L. HOM05D003331 ORTHO05D003264 2.1e-12 77.0 194 36.6
Lalb_Chr16g0377411 Lupinus albus HOM05D003331 ORTHO05D003264 2.1e-12 77.0 179 39.7
CDE09G0805 Ceratophyllum demersum HOM05D003331 ORTHO05D003264 4.8e-12 75.9 191 33.5
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.8e-12 75.9 187 35.8
Potri.002G018400 Populus trichocarpa HOM05D003331 ORTHO05D003264 4.8e-12 75.9 220 33.2
ECA232G3395 Erigeron canadensis HOM05D003331 ORTHO05D003264 6.2e-12 75.5 200 35.0
HPP92_022194 Vanilla planifolia HOM05D003331 ORTHO05D003264 6.2e-12 75.5 204 35.3
arahy.Tifrunner.gnm1.ann1.DM1BVQ Arachis hypogaea HOM05D057335 ORTHO05D003264 8.1e-12 75.1 188 37.2
arahy.Tifrunner.gnm1.ann1.FUM12Z Arachis hypogaea HOM05D057335 ORTHO05D003264 8.1e-12 75.1 188 37.2
A03p63930 Brassica napus HOM05D003331 ORTHO05D003264 1.8e-11 73.9 195 37.9
BraA03t15462Z Brassica rapa HOM05D003331 ORTHO05D003264 1.8e-11 73.9 195 37.9
Gohir.D01G096500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.8e-11 73.9 181 36.5
Solyc02g061990.3 Solanum lycopersicum HOM05D003331 ORTHO05D003264 1.8e-11 73.9 183 37.7
Lj2g0025662 Lotus japonicus HOM05D003331 ORTHO05D003264 2.4e-11 73.6 181 39.2
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 3.1e-11 73.2 186 35.5
Gorai.009G269300 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.0e-11 72.8 190 36.3
HPP92_022184 Vanilla planifolia HOM05D003331 ORTHO05D003264 5.3e-11 72.4 240 33.8
Ah.03g143180 Amaranthus hybridus HOM05D000531 ORTHO05D003264 9.0e-11 71.6 188 37.2
RcHm_v2.0_Chr6g0303481 Rosa chinensis HOM05D003331 ORTHO05D003264 9.0e-11 71.6 194 34.5
Cpa.g.sc6.298 Carica papaya HOM05D003331 ORTHO05D003264 1.2e-10 71.2 157 40.1
Oeu033812.1 Olea europaea HOM05D003331 ORTHO05D003264 1.2e-10 71.2 181 38.1
PGR083G0975 Punica granatum HOM05D003331 ORTHO05D003264 2.0e-10 70.5 194 34.5
FAN20G2542 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.6e-10 70.1 191 36.6
Actinidia17008 Actinidia chinensis HOM05D003331 ORTHO05D003264 4.5e-10 69.3 222 33.3
EL10Ac6g15165 Beta vulgaris HOM05D003331 ORTHO05D003264 7.6e-10 68.6 197 37.6
ClCG10G000520 Citrullus lanatus HOM05D003331 ORTHO05D003264 1.0e-09 68.2 183 36.1
PGR031G1921 Punica granatum HOM05D003331 ORTHO05D003264 1.7e-09 67.4 206 35.0
EL10Ac6g15162 Beta vulgaris HOM05D003331 ORTHO05D003264 3.8e-09 66.2 183 37.2
Thhalv10023128m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 3.8e-09 66.2 183 33.3
Peaxi162Scf00439g00042 Petunia axillaris HOM05D003331 ORTHO05D003264 4.9e-09 65.9 191 34.0
BcaC04g22944 Brassica carinata HOM05D003331 ORTHO05D003264 6.4e-09 65.5 184 34.2
C09p13610 Brassica napus HOM05D003331 ORTHO05D003264 6.4e-09 65.5 184 34.2
BolC9t54251H Brassica oleracea HOM05D003331 ORTHO05D003264 6.4e-09 65.5 184 34.2
Sed0019142 Sechium edule HOM05D003331 ORTHO05D003264 6.4e-09 65.5 177 36.7
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 8.4e-09 65.1 194 33.5
BcaNung05055 Brassica carinata HOM05D003331 ORTHO05D003264 1.9e-08 63.9 184 35.3
BraA09t36795Z Brassica rapa HOM05D003331 ORTHO05D003264 1.9e-08 63.9 184 34.2
Gohir.A05G256250 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.9e-08 63.9 183 33.9
TPR.G10558 Trifolium pratense HOM05D003331 ORTHO05D003264 1.9e-08 63.9 198 33.8
BcaB03g16550 Brassica carinata HOM05D003331 ORTHO05D003264 2.5e-08 63.5 198 33.3
A09p11560 Brassica napus HOM05D003331 ORTHO05D003264 5.5e-08 62.4 183 35.0
SalBow3G1427 Salvia bowleyana HOM05D003331 ORTHO05D003264 7.1e-08 62.0 180 33.9
Sc03g0003730 Simmondsia chinensis HOM05D003331 ORTHO05D003264 1.2e-07 61.2 189 33.3
BcaB07g31705 Brassica carinata HOM05D003331 ORTHO05D003264 1.6e-07 60.8 189 34.4
DCAR_020616 Daucus carota HOM05D000531 ORTHO05D001630 1.6e-07 60.8 210 31.9
Eucgr.J00320 Eucalyptus grandis HOM05D000531 ORTHO05D001630 2.1e-07 60.5 198 32.8
MD15G1008300 Malus domestica HOM05D003331 ORTHO05D003264 2.7e-07 60.1 186 33.3
Glyma.02G045500 Glycine max HOM05D003331 ORTHO05D003264 3.5e-07 59.7 222 32.0
FAN27G3080 Fragaria x ananassa HOM05D003331 ORTHO05D003264 6.0e-07 58.9 188 31.9
BraA09t36802Z Brassica rapa HOM05D003331 ORTHO05D003264 7.9e-07 58.5 182 32.4
Lj3g0019182 Lotus japonicus HOM05D000531 ORTHO05D001630 7.9e-07 58.5 191 33.0
PGSC0003DMG400003652 Solanum tuberosum HOM05D003331 ORTHO05D003264 7.9e-07 58.5 140 35.0
A07p03180 Brassica napus HOM05D003331 ORTHO05D003264 1.0e-06 58.2 199 31.7
BraA07t28114Z Brassica rapa HOM05D003331 ORTHO05D003264 1.0e-06 58.2 199 31.7
Hund05165 Selenicereus undatus HOM05D003331 ORTHO05D003264 1.8e-06 57.4 191 30.4
Glyma.16G123451 Glycine max HOM05D003331 ORTHO05D003264 2.3e-06 57.0 229 31.4
FAN15G0714 Fragaria x ananassa HOM05D003331 ORTHO05D003264 3.9e-06 56.2 186 32.3
PGR044G2422 Punica granatum HOM05D000531 ORTHO05D001630 3.9e-06 56.2 205 29.8
C07p05420 Brassica napus HOM05D003331 ORTHO05D003264 5.1e-06 55.8 200 31.5
ClCG08G008570 Citrullus lanatus HOM05D000531 ORTHO05D001630 5.1e-06 55.8 211 30.3
MELO3C019925.2 Cucumis melo HOM05D000531 ORTHO05D001630 5.1e-06 55.8 211 30.3
CsaV3_6G004560 Cucumis sativus L. HOM05D000531 ORTHO05D001630 5.1e-06 55.8 211 30.3
Lsat_1_v5_gn_5_154320 Lactuca sativa HOM05D000531 ORTHO05D001630 5.1e-06 55.8 218 28.4
Potri.010G248300 Populus trichocarpa HOM05D000531 ORTHO05D001630 5.1e-06 55.8 198 29.3
RcHm_v2.0_Chr1g0330441 Rosa chinensis HOM05D000531 ORTHO05D001630 5.1e-06 55.8 213 31.0
Sabra02G0014700 Salix brachista HOM05D003331 ORTHO05D003264 5.1e-06 55.8 236 28.0
SGA_v2.0_scaffold137G35070 Striga asiatica HOM05D003331 ORTHO05D003264 6.7e-06 55.5 34 82.4
FvH4_7g04850 Fragaria vesca HOM05D000531 ORTHO05D001630 8.7e-06 55.1 207 30.9
RcHm_v2.0_Chr5g0044371 Rosa chinensis HOM05D000531 ORTHO05D000877 8.7e-06 55.1 236 31.4


User provided reference genes

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