Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 1.3e-120 436.4 220 100.0
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 8.7e-77 290.8 171 77.8
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.3e-72 276.9 168 73.8
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 2.1e-70 269.6 168 72.0
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 4.6e-70 268.5 175 70.3
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 5.1e-69 265.0 163 71.2
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 1.1e-68 263.8 168 70.8
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.5e-68 263.5 166 71.7
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.5e-68 263.5 175 67.4
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 1.5e-68 263.5 170 68.8
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 5.7e-68 261.5 175 66.9
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 7.4e-68 261.2 167 67.7
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.6e-67 260.0 174 67.2
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 2.2e-67 259.6 175 69.1
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 6.3e-67 258.1 168 67.3
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 6.3e-67 258.1 167 69.5
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 6.3e-67 258.1 168 68.5
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.4e-66 256.9 167 68.3
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.8e-66 256.5 166 70.5
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.8e-66 256.5 174 67.2
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.4e-66 256.1 167 69.5
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 4.1e-66 255.4 168 67.3
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.3e-66 255.0 175 65.7
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.3e-66 255.0 175 65.7
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 5.3e-66 255.0 167 69.5
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 9.0e-66 254.2 168 67.3
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 9.0e-66 254.2 175 65.7
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 9.0e-66 254.2 170 70.0
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.2e-65 253.8 170 70.0
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 1.5e-65 253.4 173 64.2
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 2.0e-65 253.1 167 68.9
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 2.6e-65 252.7 166 67.5
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 3.4e-65 252.3 168 66.7
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.4e-65 252.3 175 65.1
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 4.5e-65 251.9 166 70.5
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 4.5e-65 251.9 168 67.3
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 4.5e-65 251.9 167 66.5
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 5.9e-65 251.5 168 66.1
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 5.9e-65 251.5 168 66.1
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 7.7e-65 251.1 167 68.9
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 1.0e-64 250.8 167 67.7
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 1.7e-64 250.0 146 76.0
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 2.2e-64 249.6 168 68.5
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 2.9e-64 249.2 175 64.6
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 3.8e-64 248.8 167 67.1
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 3.8e-64 248.8 168 66.7
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 5.0e-64 248.4 168 66.7
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 6.5e-64 248.1 167 65.3
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 6.5e-64 248.1 167 64.7
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 6.5e-64 248.1 166 65.7
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 8.5e-64 247.7 168 65.5
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.1e-63 247.3 167 66.5
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.4e-63 246.9 168 66.7
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 1.4e-63 246.9 174 64.9
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 5.5e-63 245.0 166 65.7
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 5.5e-63 245.0 166 66.3
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 5.5e-63 245.0 167 67.7
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.2e-62 243.8 168 65.5
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.6e-62 243.4 170 65.3
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.6e-62 243.4 175 65.1
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 1.6e-62 243.4 167 62.9
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 2.1e-62 243.0 167 64.7
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 2.1e-62 243.0 167 67.1
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 2.7e-62 242.7 173 64.2
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 2.7e-62 242.7 175 62.9
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 3.6e-62 242.3 166 65.7
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 4.6e-62 241.9 166 65.7
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 6.1e-62 241.5 167 64.1
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.1e-62 241.5 160 69.4
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.4e-61 240.4 174 63.8
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 1.4e-61 240.4 167 65.3
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.4e-61 240.4 166 65.1
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 1.8e-61 240.0 166 65.7
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 3.9e-61 238.8 135 80.0
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.6e-60 236.1 162 65.4
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 2.8e-59 232.6 189 58.2
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 2.8e-59 232.6 166 60.8
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 3.7e-59 232.3 202 55.4
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 1.7e-56 223.4 191 56.0
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 2.2e-56 223.0 134 74.6
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 4.7e-54 215.3 134 70.9
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.8e-53 213.4 134 71.6
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 3.9e-53 212.2 165 60.0
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 6.7e-53 211.5 137 68.6
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 8.8e-53 211.1 137 67.9
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 5.7e-52 208.4 166 57.2
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 1.3e-51 207.2 163 57.1
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 2.2e-51 206.5 166 54.8
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 9.1e-50 201.1 165 53.3
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 5.9e-49 198.4 166 59.6
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 1.5e-47 193.7 153 54.9
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 5.5e-47 191.8 103 79.6
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 7.5e-44 181.4 120 69.2
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.3e-43 180.6 106 73.6
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 1.7e-43 180.3 120 68.3
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 1.1e-42 177.6 106 73.6
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 5.9e-41 171.8 141 58.9
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 4.2e-39 165.6 104 68.3
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.5e-36 157.1 170 46.5
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.8e-35 152.9 170 45.9
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 2.4e-34 149.8 199 43.2
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.4e-34 148.7 81 79.0
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.7e-32 143.7 167 43.7
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 3.2e-31 139.4 91 70.3
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 3.5e-25 119.4 93 60.2
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.8e-22 109.8 85 61.2
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 8.0e-22 108.2 167 37.7
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 2.4e-18 96.7 72 61.1
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.2e-17 94.4 55 74.5
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 7.8e-17 91.7 70 60.0
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 4.0e-13 79.3 73 49.3
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 1.7e-11 73.9 146 36.3
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 1.7e-11 73.9 164 34.8
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 1.7e-11 73.9 146 36.3
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 2.9e-11 73.2 91 42.9
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 8.3e-11 71.6 121 40.5
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 3.0e-08 63.2 54 55.6
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 2.5e-07 60.1 42 59.5


User provided reference genes

Program Settings