Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.4e-62 242.7 114 100.0
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 5.4e-30 134.4 114 57.0
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 6.6e-28 127.5 105 60.0
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 8.6e-28 127.1 125 56.0
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 1.1e-27 126.7 115 53.0
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 1.5e-27 126.3 114 56.1
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.6e-26 122.9 114 50.9
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.7e-26 121.3 114 56.1
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 4.7e-26 121.3 114 52.6
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 6.2e-26 120.9 104 58.7
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 6.2e-26 120.9 116 54.3
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 8.1e-26 120.6 125 54.4
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.8e-25 119.4 104 54.8
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.1e-25 118.6 114 52.6
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.0e-25 118.2 114 51.8
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 4.0e-25 118.2 104 52.9
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 6.9e-25 117.5 101 58.4
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 6.9e-25 117.5 114 54.4
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 6.9e-25 117.5 113 48.7
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 8.9e-25 117.1 57 82.5
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 8.9e-25 117.1 112 52.7
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 1.2e-24 116.7 104 53.8
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.2e-24 116.7 104 52.9
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 1.2e-24 116.7 95 62.1
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.5e-24 116.3 114 52.6
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.5e-24 116.3 114 50.9
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.5e-24 116.3 78 65.4
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 2.0e-24 115.9 114 51.8
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.0e-24 115.9 104 52.9
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.6e-24 115.5 114 49.1
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 2.6e-24 115.5 62 77.4
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 3.4e-24 115.2 103 53.4
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 4.4e-24 114.8 114 50.9
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 5.8e-24 114.4 87 60.9
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 5.8e-24 114.4 114 51.8
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 7.6e-24 114.0 121 54.5
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 7.6e-24 114.0 107 55.1
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.6e-24 114.0 53 86.8
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.6e-24 114.0 53 86.8
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.6e-24 114.0 53 86.8
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 7.6e-24 114.0 105 56.2
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 7.6e-24 114.0 71 70.4
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 9.9e-24 113.6 58 79.3
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 9.9e-24 113.6 107 56.1
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.3e-23 113.2 105 55.2
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 1.3e-23 113.2 53 90.6
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 1.7e-23 112.8 114 50.9
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 1.7e-23 112.8 51 90.2
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 2.2e-23 112.5 114 50.0
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 2.2e-23 112.5 52 88.5
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.2e-23 112.5 52 88.5
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.2e-23 112.5 52 88.5
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.2e-23 112.5 58 77.6
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.2e-23 112.5 73 67.1
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 2.9e-23 112.1 60 80.0
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 2.9e-23 112.1 61 77.0
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.9e-23 112.1 115 47.8
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.9e-23 112.1 102 52.9
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 2.9e-23 112.1 118 53.4
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 3.8e-23 111.7 115 53.0
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 4.9e-23 111.3 53 86.8
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 4.9e-23 111.3 57 82.5
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.9e-23 111.3 115 50.4
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 4.9e-23 111.3 114 50.0
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 4.9e-23 111.3 105 52.4
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.4e-23 110.5 102 52.9
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.4e-23 110.5 115 47.0
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.4e-22 109.8 50 90.0
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.4e-22 109.8 102 52.9
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.4e-22 109.8 52 86.5
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.9e-22 109.4 110 52.7
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.9e-22 109.4 52 86.5
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.9e-22 109.4 117 48.7
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 2.4e-22 109.0 106 51.9
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 2.4e-22 109.0 106 51.9
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 2.4e-22 109.0 106 51.9
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 2.4e-22 109.0 106 51.9
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 2.4e-22 109.0 106 51.9
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 2.4e-22 109.0 69 69.6
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 2.4e-22 109.0 110 49.1
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 2.4e-22 109.0 88 56.8
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 2.4e-22 109.0 68 67.6
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 3.2e-22 108.6 112 48.2
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 5.4e-22 107.8 79 62.0
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 9.3e-22 107.1 51 84.3
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.2e-21 106.7 58 70.7
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 1.6e-21 106.3 106 51.9
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.6e-21 106.3 104 52.9
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 1.6e-21 106.3 53 77.4
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.6e-21 106.3 53 77.4
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 2.1e-21 105.9 50 86.0
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 2.1e-21 105.9 66 66.7
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 2.1e-21 105.9 50 84.0
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 2.1e-21 105.9 50 84.0
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 2.1e-21 105.9 50 84.0
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 2.7e-21 105.5 106 50.0
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 2.7e-21 105.5 118 48.3
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 3.5e-21 105.1 106 49.1
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 7.8e-21 104.0 50 82.0
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 1.0e-20 103.6 52 76.9
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 1.0e-20 103.6 107 51.4
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.3e-20 103.2 103 52.4
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 2.3e-20 102.4 52 76.9
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 2.3e-20 102.4 113 47.8
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 3.9e-20 101.7 100 53.0
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 6.6e-20 100.9 92 55.4
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 6.6e-20 100.9 47 85.1
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 3.3e-19 98.6 46 84.8
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 4.3e-19 98.2 68 61.8
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 9.6e-19 97.1 67 64.2
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 8.1e-18 94.0 64 67.2
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 1.8e-17 92.8 61 60.7
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 2.4e-17 92.4 51 72.5
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 4.0e-17 91.7 116 43.1
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 4.5e-16 88.2 49 67.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 3.2e-14 82.0 58 55.2
SalBow3G3665 Salvia bowleyana HOM05D006940 ORTHO05D008626 5.5e-06 54.7 28 75.0


User provided reference genes

Program Settings