Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 9.0e-143 510.4 283 100.0
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.3e-80 303.9 274 65.3
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 8.9e-74 281.2 300 59.3
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 3.4e-73 279.3 273 62.3
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 2.2e-72 276.6 290 60.3
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 4.9e-72 275.4 250 62.8
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 1.4e-71 273.9 275 59.3
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 9.2e-71 271.2 296 58.8
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 2.7e-70 269.6 290 56.6
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 3.5e-70 269.2 276 59.4
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 1.0e-69 267.7 288 59.4
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.7e-69 266.9 250 61.2
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 1.1e-68 264.2 206 69.9
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 2.5e-68 263.1 282 59.9
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 3.3e-68 262.7 279 59.1
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 6.2e-67 258.5 250 64.0
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 2.3e-66 256.5 268 61.2
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 4.0e-66 255.8 262 57.6
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.5e-65 253.8 278 57.2
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 2.0e-65 253.4 284 57.4
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 2.6e-65 253.1 245 62.0
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 5.8e-65 251.9 272 57.4
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 9.9e-65 251.1 283 55.8
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.2e-64 250.0 282 55.3
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 2.2e-64 250.0 226 63.3
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 3.7e-64 249.2 235 63.0
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 4.9e-64 248.8 294 54.4
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 6.4e-64 248.4 282 55.7
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 1.1e-63 247.7 278 56.5
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 1.4e-63 247.3 287 56.4
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.4e-63 247.3 280 55.4
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 4.1e-63 245.7 293 52.9
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 5.4e-63 245.4 258 56.6
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 7.1e-63 245.0 272 55.5
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 7.1e-63 245.0 281 55.5
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 7.1e-63 245.0 291 55.3
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 9.2e-63 244.6 302 53.6
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 9.2e-63 244.6 250 56.4
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.2e-62 244.2 245 61.6
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 1.2e-62 244.2 291 56.7
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 1.2e-62 244.2 297 53.9
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 1.2e-62 244.2 293 52.6
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.6e-62 243.8 257 59.9
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.6e-62 243.8 204 66.7
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 2.7e-62 243.0 245 61.2
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 3.5e-62 242.7 266 54.9
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 4.6e-62 242.3 291 55.0
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 6.0e-62 241.9 234 61.5
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 6.0e-62 241.9 303 53.5
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 8.6e-61 238.0 236 61.4
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 1.1e-60 237.7 272 54.4
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 1.5e-60 237.3 231 61.9
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 1.5e-60 237.3 283 52.7
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 7.3e-60 235.0 264 56.1
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 1.6e-59 233.8 241 57.7
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 1.6e-59 233.8 286 53.5
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 1.1e-58 231.1 204 64.2
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 1.1e-58 231.1 293 53.2
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 1.4e-58 230.7 248 56.5
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.8e-58 230.3 281 53.7
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 3.1e-58 229.6 284 53.9
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 4.0e-58 229.2 258 55.4
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 5.2e-58 228.8 265 53.6
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 5.2e-58 228.8 265 53.6
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 8.9e-58 228.0 281 52.7
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 8.9e-58 228.0 251 57.0
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 1.5e-57 227.3 248 56.5
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 2.0e-57 226.9 190 67.4
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 4.4e-57 225.7 257 55.6
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 5.8e-57 225.3 262 54.2
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 5.8e-57 225.3 262 54.2
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 5.8e-57 225.3 262 54.6
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 7.6e-57 224.9 262 54.6
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 7.6e-57 224.9 263 53.2
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 1.3e-56 224.2 262 53.8
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 2.2e-56 223.4 280 52.1
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 2.9e-56 223.0 279 52.3
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 8.4e-56 221.5 260 52.7
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 8.4e-56 221.5 214 64.0
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 1.4e-55 220.7 240 55.0
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 1.9e-55 220.3 259 52.5
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 4.1e-55 219.2 284 51.1
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 9.2e-55 218.0 222 55.0
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 4.6e-54 215.7 333 46.8
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 1.0e-53 214.5 204 60.3
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 3.9e-53 212.6 287 47.7
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 4.3e-52 209.1 243 54.7
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 1.6e-51 207.2 232 53.9
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 1.1e-50 204.5 221 58.4
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 1.4e-50 204.1 177 66.7
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.4e-50 204.1 248 55.6
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.1e-50 203.0 248 55.2
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 1.2e-49 201.1 179 63.7
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 1.2e-49 201.1 179 63.7
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.6e-49 199.9 248 54.8
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 6.0e-46 188.7 200 59.0
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 1.8e-42 177.2 222 51.4
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 9.0e-42 174.9 180 61.1
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 2.6e-41 173.3 249 47.0
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 2.9e-40 169.9 165 58.2
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 9.3e-39 164.9 149 61.1
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 2.1e-38 163.7 175 53.7
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 1.0e-37 161.4 163 56.4
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.0e-37 161.4 275 43.6
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 1.8e-37 160.6 163 55.8
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.1e-36 157.9 243 43.6
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 7.4e-36 155.2 185 51.9
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 1.6e-35 154.1 208 49.5
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 4.0e-34 149.4 170 54.1
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 3.4e-33 146.4 132 63.6
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 1.7e-32 144.1 195 45.6
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 3.2e-31 139.8 227 43.6
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 1.6e-30 137.5 139 59.7
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 6.9e-26 122.1 166 49.4
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 6.9e-26 122.1 166 49.4
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 2.6e-25 120.2 126 56.3
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 7.6e-25 118.6 196 41.3
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 4.9e-24 115.9 84 70.2
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 8.4e-24 115.2 138 52.2
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 1.0e-21 108.2 194 40.2
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 3.3e-20 103.2 98 55.1
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 1.4e-18 97.8 232 36.6
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 6.9e-18 95.5 158 48.1
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 2.6e-17 93.6 152 42.8
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 5.0e-16 89.4 75 68.0
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 4.2e-15 86.3 199 38.7
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 1.2e-14 84.7 72 66.7
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 7.9e-14 82.0 158 36.7
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 9.7e-12 75.1 62 62.9
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 6.3e-11 72.4 169 30.2
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 4.1e-10 69.7 104 49.0
Lsat_1_v5_gn_5_140640 Lactuca sativa HOM05D005433 ORTHO05D006675 2.6e-09 67.0 46 67.4
TAR629G0034 Trochodendron aralioides HOM05D005433 ORTHO05D006675 4.5e-09 66.2 50 68.0
PRCOL_00001575 Prasinoderma coloniale HOM05D005433 ORTHO05D006675 5.0e-08 62.8 181 30.9
Actinidia09909 Actinidia chinensis HOM05D005433 ORTHO05D006675 6.1e-06 55.8 43 65.1
CARHR090070 Cardamine hirsuta HOM05D005433 ORTHO05D006675 6.1e-06 55.8 32 75.0


User provided reference genes

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