Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g18824_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D002388 8.2e-102 374.8 395 100.0
MBI04_g04726_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D002388 6.2e-49 199.1 171 95.9
Aqoxy7G00400 Aquilegia oxysepala HOM05D000094 ORTHO05D002388 2.9e-22 110.5 163 73.0
Cfa008299 Carpinus fangiana HOM05D000094 ORTHO05D002388 3.8e-22 110.2 175 66.9
Haze_13732 Corylus avellana HOM05D000094 ORTHO05D002388 8.4e-22 109.0 169 69.2
FAN01G2743 Fragaria x ananassa HOM05D000094 ORTHO05D002388 8.4e-22 109.0 169 71.0
FvH4_7g29180 Fragaria vesca HOM05D000094 ORTHO05D002388 2.5e-21 107.5 169 70.4
FAN06G2413 Fragaria x ananassa HOM05D000094 ORTHO05D002388 2.5e-21 107.5 169 70.4
FAN06G5003 Fragaria x ananassa HOM05D000094 ORTHO05D002388 2.5e-21 107.5 169 70.4
FAN03G1247 Fragaria x ananassa HOM05D000094 ORTHO05D002388 1.2e-20 105.1 168 70.2
CiPaw.04G065900 Carya illinoinensis HOM05D000094 ORTHO05D002388 2.1e-20 104.4 167 70.1
Sabra12G0104300 Salix brachista HOM05D000094 ORTHO05D012275 2.1e-20 104.4 163 73.6
Sabra15G0151700 Salix brachista HOM05D000094 ORTHO05D002388 3.5e-20 103.6 169 71.0
CSS0008985 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 6.1e-20 102.8 167 69.5
CSS0034134 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 6.1e-20 102.8 167 69.5
CiPaw.03G104200 Carya illinoinensis HOM05D000094 ORTHO05D002388 7.9e-20 102.4 169 69.2
Potri.015G141200 Populus trichocarpa HOM05D000094 ORTHO05D002388 1.0e-19 102.1 163 73.0
Atru.chr1.486 Acer truncatum HOM05D000094 ORTHO05D002388 1.3e-19 101.7 171 66.1
PSO782G0366 Papaver somniferum HOM05D000094 ORTHO05D002388 2.3e-19 100.9 173 67.6
FAN10G0047 Fragaria x ananassa HOM05D000094 ORTHO05D002388 3.0e-19 100.5 166 69.9
Duzib205G1047 Durio zibethinus HOM05D000094 ORTHO05D002388 8.7e-19 99.0 166 69.3
Prupe.2G292000 Prunus persica HOM05D000094 ORTHO05D002388 8.7e-19 99.0 169 68.6
Potri.012G139000 Populus trichocarpa HOM05D000094 ORTHO05D002388 1.1e-18 98.6 163 71.8
THA.LOC104818278 Tarenaya hassleriana HOM05D000094 ORTHO05D002388 1.1e-18 98.6 167 67.1
SalBow4G0307 Salvia bowleyana HOM05D000094 ORTHO05D002388 1.5e-18 98.2 168 67.9
SalBow4G3185 Salvia bowleyana HOM05D000094 ORTHO05D002388 1.5e-18 98.2 168 67.9
Gorai.004G120000 Gossypium raimondii HOM05D000094 ORTHO05D002388 1.9e-18 97.8 168 67.3
QL09p014617 Quercus lobata HOM05D000094 ORTHO05D002388 4.3e-18 96.7 165 69.7
CDE07G1342 Ceratophyllum demersum HOM05D000094 ORTHO05D002388 5.7e-18 96.3 177 65.0
MD07G1266400 Malus domestica HOM05D000094 ORTHO05D002388 7.4e-18 95.9 169 67.5
Peaxi162Scf00915g00011 Petunia axillaris HOM05D000094 ORTHO05D002388 7.4e-18 95.9 170 67.1
Thecc.03G172900 Theobroma cacao HOM05D000094 ORTHO05D002388 9.7e-18 95.5 158 69.6
Gohir.A09G180200 Gossypium hirsutum HOM05D000094 ORTHO05D002388 1.3e-17 95.1 168 66.1
PSO478G3366 Papaver somniferum HOM05D000094 ORTHO05D002388 1.3e-17 95.1 173 67.6
MSTRG.8751 Avicennia marina HOM05D000094 ORTHO05D002388 2.2e-17 94.4 172 66.9
THA.LOC104801837 Tarenaya hassleriana HOM05D000094 ORTHO05D002388 3.7e-17 93.6 169 65.7
MSTRG.27127 Avicennia marina HOM05D000094 ORTHO05D002388 4.8e-17 93.2 173 67.1
Cpa.g.sc107.30 Carica papaya HOM05D000094 ORTHO05D002388 8.2e-17 92.4 166 67.5
Dinv35197 Davidia involucrata HOM05D000094 ORTHO05D012275 8.2e-17 92.4 170 67.1
Thhalv10012465m.g Eutrema salsugineum HOM05D000094 ORTHO05D002388 8.2e-17 92.4 173 63.6
Glyma.20G156700 Glycine max HOM05D000094 ORTHO05D002388 8.2e-17 92.4 163 68.7
Aa31LG3G19100 Aethionema arabicum HOM05D000094 ORTHO05D002388 2.4e-16 90.9 168 65.5
TWI14G0045 Tripterygium wilfordii HOM05D000094 ORTHO05D002388 3.1e-16 90.5 154 75.3
TWI39G1282 Tripterygium wilfordii HOM05D000094 ORTHO05D002388 5.3e-16 89.7 154 71.4
vmacro09844 Vaccinium macrocarpon HOM05D000094 ORTHO05D002388 5.3e-16 89.7 172 66.3
VMungo0720G0824 Vigna mungo HOM05D000094 ORTHO05D002388 6.9e-16 89.4 163 69.3
Manes.06G145700 Manihot esculenta HOM05D000094 ORTHO05D002388 1.5e-15 88.2 160 66.2
ECA232G0360 Erigeron canadensis HOM05D000094 ORTHO05D002388 2.6e-15 87.4 158 66.5
LjContig00238g0008974 Lotus japonicus HOM05D000094 ORTHO05D002388 3.4e-15 87.0 163 65.0
PGSC0003DMG400014281 Solanum tuberosum HOM05D000094 ORTHO05D002388 3.4e-15 87.0 170 64.7
Sed0003692 Sechium edule HOM05D000094 ORTHO05D002388 4.5e-15 86.7 172 64.0
Glyma.10G237900 Glycine max HOM05D000094 ORTHO05D002388 5.9e-15 86.3 162 67.9
HanXRQChr09g0253741 Helianthus annuus HOM05D000094 ORTHO05D002388 5.9e-15 86.3 171 62.6
BcaC06g32455 Brassica carinata HOM05D000094 ORTHO05D002388 7.7e-15 85.9 173 61.8
Lalb_Chr02g0140951 Lupinus albus HOM05D000094 ORTHO05D002388 7.7e-15 85.9 163 66.9
RcHm_v2.0_Chr1g0376951 Rosa chinensis HOM05D000094 ORTHO05D002388 7.7e-15 85.9 169 65.1
C09p69400 Brassica napus HOM05D000094 ORTHO05D002388 1.3e-14 85.1 173 61.3
CAN.G856.5 Capsicum annuum HOM05D000094 ORTHO05D002388 1.3e-14 85.1 170 64.7
ClCG05G007920 Citrullus lanatus HOM05D000094 ORTHO05D002388 1.3e-14 85.1 160 68.1
Phvul.007G067700 Phaseolus vulgaris HOM05D000094 ORTHO05D002388 2.2e-14 84.3 163 67.5
CsaV3_3G016940 Cucumis sativus L. HOM05D000094 ORTHO05D002388 2.9e-14 84.0 172 64.0
MD01G1198500 Malus domestica HOM05D000094 ORTHO05D002388 2.9e-14 84.0 169 65.1
A10p29040 Brassica napus HOM05D000094 ORTHO05D002388 5.0e-14 83.2 173 61.3
BraA10t44952Z Brassica rapa HOM05D000094 ORTHO05D002388 5.0e-14 83.2 173 61.3
MELO3C006890.2 Cucumis melo HOM05D000094 ORTHO05D002388 5.0e-14 83.2 172 64.0
Rhsim09G0197300 Rhododendron simsii HOM05D000094 ORTHO05D002388 5.0e-14 83.2 165 65.5
BolC9t59684H Brassica oleracea HOM05D000094 ORTHO05D002388 8.5e-14 82.4 173 61.3
SEGI_18035 Sequoiadendron giganteum HOM05D000094 ORTHO05D002388 8.5e-14 82.4 164 63.4
Sp6g35610 Schrenkiella parvula HOM05D000094 ORTHO05D002388 1.1e-13 82.0 160 66.2
TPR.G14332 Trifolium pratense HOM05D000094 ORTHO05D002388 1.4e-13 81.6 163 66.3
Lsat_1_v5_gn_0_29921 Lactuca sativa HOM05D000094 ORTHO05D002388 1.9e-13 81.3 165 64.2
PGR042G0627 Punica granatum HOM05D000094 ORTHO05D002388 1.9e-13 81.3 170 60.6
Actinidia03114 Actinidia chinensis HOM05D000094 ORTHO05D002388 4.2e-13 80.1 164 66.5
CANSAT21G1826 Cannabis sativa HOM05D000094 ORTHO05D002388 4.2e-13 80.1 155 69.7
Solyc03g026040.4 Solanum lycopersicum HOM05D000094 ORTHO05D002388 4.2e-13 80.1 170 62.9
Sopen03g004870 Solanum pennellii HOM05D000094 ORTHO05D002388 4.2e-13 80.1 170 63.5
Medtr1g100787 Medicago truncatula HOM05D000094 ORTHO05D002388 3.6e-12 77.0 163 65.0
Psat2g120920 Pisum sativum HOM05D000094 ORTHO05D002388 3.6e-12 77.0 163 59.5
SGA_v2.0_scaffold221G42717 Striga asiatica HOM05D000094 ORTHO05D002388 6.1e-12 76.3 165 63.0
Ciclev10033944m.g Citrus clementina HOM05D000094 ORTHO05D002388 1.8e-11 74.7 167 63.5
DCAR_018185 Daucus carota HOM05D000094 ORTHO05D002388 3.0e-11 73.9 171 62.0
Ca_27403_v3 Cicer arietinum L. HOM05D000094 ORTHO05D002388 8.8e-11 72.4 163 64.4
Lsat_1_v5_gn_2_133981 Lactuca sativa HOM05D000094 ORTHO05D002388 1.1e-10 72.0 170 61.2
FAN03G0530 Fragaria x ananassa HOM05D000094 ORTHO05D002388 2.0e-10 71.2 71 47.9
HanXRQChr14g0462251 Helianthus annuus HOM05D000094 ORTHO05D002388 2.5e-10 70.9 145 66.9
Nitab4.5_0000716g0270 Nicotiana tabacum HOM05D000094 ORTHO05D002388 5.7e-10 69.7 170 57.6
Migut.F00358 Erythranthe guttata HOM05D000094 ORTHO05D002388 7.4e-10 69.3 74 47.3
GSVIVG01010596001 Vitis vinifera HOM05D000094 ORTHO05D002388 2.8e-09 67.4 76 43.4
Nitab4.5_0001508g0090 Nicotiana tabacum HOM05D000094 ORTHO05D002388 1.4e-08 65.1 164 57.9
Psat2g120840 Pisum sativum HOM05D000156 ORTHO05D002388 2.4e-08 64.3 163 60.1
ECA238G3467 Erigeron canadensis HOM05D000094 ORTHO05D002388 3.1e-08 63.9 141 69.5
Cc02_g03230 Coffea canephora HOM05D000094 ORTHO05D002388 4.1e-08 63.5 71 47.9
SHI13801 Sapria himalayana HOM05D000094 ORTHO05D002388 1.5e-07 61.6 161 67.1
COL.COLO4_14282 Corchorus olitorius HOM05D000094 ORTHO05D034865 2.0e-07 61.2 126 75.4
Eucgr.A02805 Eucalyptus grandis HOM05D000094 ORTHO05D002388 3.4e-07 60.5 71 40.8
Ciclev10027133m.g Citrus clementina HOM05D000094 ORTHO05D002388 7.7e-07 59.3 154 64.9
Psat0s4255g0080 Pisum sativum HOM05D001507 ORTHO05D002108 2.2e-06 57.8 41 65.9
Psat6g205560 Pisum sativum HOM05D001592 ORTHO05D030445 2.2e-06 57.8 41 65.9
Psat6g205600 Pisum sativum HOM05D000129 ORTHO05D030445 2.2e-06 57.8 41 65.9
Ciclev10004265m.g Citrus clementina HOM05D000094 ORTHO05D002388 5.0e-06 56.6 64 48.4


User provided reference genes

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