Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.5e-133 479.6 251 100.0
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 4.2e-59 232.3 239 56.5
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 4.6e-58 228.8 227 55.5
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 6.1e-58 228.4 242 57.9
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 8.8e-57 224.6 233 54.9
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.5e-56 223.8 226 57.5
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.0e-56 223.4 229 55.5
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 2.0e-56 223.4 234 56.4
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.3e-56 222.6 234 56.4
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 3.3e-56 222.6 222 56.8
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 4.3e-56 222.2 226 56.6
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 4.3e-56 222.2 226 57.1
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 5.7e-56 221.9 230 55.2
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 7.4e-56 221.5 232 55.2
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.7e-55 220.3 234 56.0
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 2.8e-55 219.5 235 54.9
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 8.2e-55 218.0 226 56.2
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 1.1e-54 217.6 219 57.5
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.4e-54 217.2 231 54.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 1.5e-53 213.8 221 56.6
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.5e-53 213.8 241 54.8
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 5.9e-53 211.8 233 51.1
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 2.2e-52 209.9 227 54.2
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 2.9e-52 209.5 226 52.7
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 6.5e-52 208.4 225 54.2
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 4.2e-51 205.7 226 54.0
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 2.1e-50 203.4 227 52.9
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 3.9e-49 199.1 213 52.6
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 3.9e-49 199.1 217 51.2
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 5.1e-49 198.7 214 49.5
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 3.3e-48 196.1 223 51.6
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 7.4e-48 194.9 213 51.6
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 7.4e-48 194.9 221 51.6
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 1.3e-47 194.1 218 51.4
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 1.3e-47 194.1 224 50.0
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.3e-47 194.1 233 49.8
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.2e-47 193.4 221 50.2
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 2.8e-47 193.0 221 50.2
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 8.2e-47 191.4 228 53.1
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.8e-46 190.3 221 50.2
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.8e-46 190.3 221 50.2
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 7.0e-46 188.3 222 48.2
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 4.5e-45 185.7 167 61.1
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 4.5e-45 185.7 176 56.8
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 7.7e-45 184.9 176 56.8
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.0e-44 184.5 234 50.4
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.7e-44 183.7 267 46.8
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.9e-44 183.0 228 51.8
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 4.2e-43 179.1 226 47.8
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 5.7e-40 168.7 212 48.6
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 4.8e-39 165.6 224 45.5
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 4.8e-39 165.6 224 45.5
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 2.4e-38 163.3 199 46.2
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 5.3e-38 162.2 141 61.7
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 7.0e-38 161.8 224 45.1
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 7.0e-38 161.8 192 52.1
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 7.7e-37 158.3 224 44.6
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 2.1e-34 150.2 181 50.3
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.7e-34 149.1 184 44.0
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 2.0e-32 143.7 172 46.5
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.3e-31 141.0 167 50.9
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 2.9e-28 129.8 159 51.6
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.9e-27 127.1 233 34.8
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.2e-26 124.4 115 58.3
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 3.4e-24 116.3 106 61.3
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.1e-22 109.8 188 38.3
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 3.8e-20 102.8 117 53.0
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.5e-19 100.1 69 75.4
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 2.1e-18 97.1 193 32.6
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 2.1e-18 97.1 102 51.0
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.0e-17 94.7 215 32.6
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.0e-16 90.5 204 32.8
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 5.7e-16 89.0 189 35.4
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.4e-14 84.3 119 41.2
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.0e-13 80.5 188 33.5
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 5.0e-12 75.9 68 61.8
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.5e-11 74.3 119 34.5
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 3.1e-09 66.6 101 36.6
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.7e-07 60.8 50 64.0


User provided reference genes

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