Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 9.8e-310 1065.8 499 100.0
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 9.0e-247 856.7 454 86.6
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.0e-246 855.5 438 87.7
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 1.2e-243 846.3 437 87.2
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 3.6e-243 844.7 445 85.8
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.6e-243 844.7 446 85.0
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 7.9e-243 843.6 459 84.1
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 1.8e-242 842.4 440 87.3
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 2.0e-241 839.0 457 84.2
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.3e-240 836.3 451 83.1
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 2.2e-240 835.5 462 82.3
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 3.7e-240 834.7 438 86.5
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.1e-239 833.2 447 83.4
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 4.1e-239 831.2 437 84.7
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 5.3e-239 830.9 446 83.2
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 6.9e-239 830.5 437 84.4
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.2e-238 829.7 449 84.2
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.5e-238 829.3 479 81.4
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.5e-238 829.3 440 85.0
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.5e-238 829.3 438 84.2
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.0e-238 828.9 455 82.2
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.6e-238 828.6 450 83.3
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 7.7e-238 827.0 473 80.5
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 7.7e-238 827.0 438 84.7
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 7.7e-238 827.0 438 84.2
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 3.8e-237 824.7 438 84.2
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 6.5e-237 823.9 460 80.9
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.1e-236 823.2 438 83.8
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.9e-236 822.4 436 84.9
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 4.2e-236 821.2 450 82.7
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 4.2e-236 821.2 457 81.4
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 5.5e-236 820.8 448 83.3
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.6e-235 819.3 437 84.0
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.6e-235 819.3 452 81.9
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 2.1e-235 818.9 435 84.1
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.0e-234 816.6 448 81.0
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.8e-234 815.8 454 80.6
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.3e-234 815.5 453 81.2
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 3.0e-234 815.1 435 84.6
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 5.1e-234 814.3 445 82.2
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 2.0e-233 812.4 454 80.2
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.6e-233 812.0 449 81.3
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 3.3e-233 811.6 436 83.9
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.7e-233 810.1 470 78.7
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.8e-232 808.5 442 81.4
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.7e-232 808.1 432 83.1
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 3.7e-232 808.1 451 80.5
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 6.3e-232 807.4 464 80.4
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.4e-231 806.2 454 79.7
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.4e-231 806.2 449 80.6
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 7.0e-231 803.9 439 82.7
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.5e-230 802.7 458 78.6
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.5e-230 802.7 474 77.2
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.5e-230 802.7 474 77.2
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 4.5e-230 801.2 472 77.3
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.7e-229 799.3 433 82.2
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.7e-229 799.3 433 82.2
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.7e-229 799.3 448 81.2
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.9e-229 798.5 433 82.7
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 2.9e-229 798.5 432 82.2
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 5.0e-229 797.7 435 82.8
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.1e-228 796.6 433 82.2
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 1.9e-228 795.8 432 82.2
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 5.5e-228 794.3 432 81.9
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 9.4e-228 793.5 432 82.6
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.2e-227 793.1 444 81.5
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 3.6e-227 791.6 440 79.8
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.4e-226 789.6 432 81.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.4e-226 789.6 433 81.8
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.4e-226 789.6 439 80.6
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.8e-226 789.3 444 81.1
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 3.0e-226 788.5 433 81.5
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 6.7e-226 787.3 440 79.8
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 6.7e-226 787.3 436 80.5
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.4e-225 784.6 436 80.0
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 7.4e-225 783.9 461 76.4
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 9.7e-225 783.5 429 82.3
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.2e-224 782.3 435 81.4
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.2e-224 782.3 435 81.4
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.8e-224 781.9 432 80.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.8e-224 781.9 480 75.4
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 2.8e-224 781.9 435 81.1
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 6.3e-224 780.8 442 80.5
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.0e-221 773.5 438 80.6
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 5.0e-221 771.2 472 75.4
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 5.0e-221 771.2 493 74.0
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.5e-220 769.6 434 78.6
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 2.7e-219 765.4 444 78.6
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.8e-215 752.7 448 77.0
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 7.0e-215 750.7 454 74.0
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 2.7e-214 748.8 382 89.0
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.6e-209 732.3 377 87.0
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 2.4e-207 725.7 441 74.6
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 2.3e-202 709.1 408 78.4
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 2.2e-200 702.6 434 72.8
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 5.9e-198 694.5 454 70.3
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 5.4e-191 671.4 419 71.6
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.1e-188 663.7 438 71.0
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 5.6e-188 661.4 433 70.4
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.5e-180 636.0 407 73.5
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 4.0e-178 628.6 435 66.9
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 4.4e-169 598.6 303 89.1
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.2e-166 590.5 330 80.0
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 3.9e-165 585.5 446 63.2
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 1.3e-163 580.5 296 86.5
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 6.9e-162 574.7 474 59.7
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 9.3e-159 564.3 376 71.5
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 8.1e-155 551.2 292 83.9
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 2.9e-136 489.6 276 80.8
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.7e-84 315.8 196 77.6
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.4e-74 283.9 178 71.3
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 7.0e-74 282.3 165 77.6
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.1e-69 266.9 132 87.9
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.3e-67 261.5 133 87.2
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 3.2e-66 256.9 369 43.4
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 1.3e-64 251.5 216 57.4
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.5e-63 248.1 136 81.6
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 5.6e-63 246.1 216 60.6
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 2.1e-62 244.2 135 80.7
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.7e-59 233.4 120 84.2
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.1e-50 202.6 124 73.4
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 8.7e-48 195.7 119 76.5
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 8.1e-46 189.1 249 47.4
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.2e-33 148.7 86 74.4
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 7.9e-25 119.4 70 71.4
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 1.3e-22 112.1 62 77.4
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.7e-22 110.5 101 52.5
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 6.3e-22 109.8 61 80.3
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.4e-21 108.6 184 38.0
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.9e-19 100.9 105 50.5
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 5.1e-16 90.1 68 61.8
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 4.2e-10 70.5 54 61.1
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 1.0e-08 65.9 43 67.4


User provided reference genes

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