Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g02631_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 1.3e-205 719.5 373 100.0
MBI07_g06919_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 9.5e-92 341.3 212 84.4
MBI07_g29092_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 3.6e-91 339.3 207 87.4
SGA_v2.0_scaffold12G06190 Striga asiatica HOM05D011891 ORTHO05D014146 1.3e-19 101.7 124 50.8
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 4.2e-15 86.7 142 43.7
SGA_v2.0_scaffold127G34043 Striga asiatica HOM05D011891 ORTHO05D014146 4.7e-14 83.2 107 43.9
MELO3C031770.2 Cucumis melo HOM05D011891 ORTHO05D014146 1.4e-13 81.6 123 46.3
Zm00001eb279500 Zea mays HOM05D031261 ORTHO05D010602 2.2e-11 74.3 161 34.8
FAN14G5886 Fragaria x ananassa HOM05D010444 ORTHO05D010602 6.3e-11 72.8 147 37.4
Thecc.02G108600 Theobroma cacao HOM05D011891 ORTHO05D014146 6.3e-11 72.8 115 39.1
Os02g0578201 Oryza sativa ssp. japonica HOM05D011587 ORTHO05D010602 5.4e-10 69.7 155 39.4
Zm00001eb244580 Zea mays HOM05D011587 ORTHO05D010602 2.7e-09 67.4 115 40.0
CiPaw.09G003700 Carya illinoinensis HOM05D014563 ORTHO05D010602 4.5e-09 66.6 164 36.0
Os04g0206650 Oryza sativa ssp. japonica HOM05D031598 ORTHO05D014146 7.7e-09 65.9 65 52.3
ATR0787G152 Amborella trichopoda HOM05D015573 ORTHO05D010602 1.7e-08 64.7 102 44.1
MBI05_g34728_MAGBIO Magnolia biondii HOM05D011587 ORTHO05D010602 2.9e-08 63.9 154 35.1
CiPaw.04G101700 Carya illinoinensis HOM05D011587 ORTHO05D010602 3.8e-08 63.5 125 41.6
MBI02_g27281_MAGBIO Magnolia biondii HOM05D000027 ORTHO05D000066 5.0e-08 63.2 111 41.4
MBI13_g04188_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 3.3e-07 60.5 61 45.9
MBI17_g19033_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 3.3e-07 60.5 174 36.8
MBI17_g19025_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 4.2e-07 60.1 118 39.8
CSS0015059 Camellia sinensis var. sinensis HOM05D031598 ORTHO05D014146 8.0e-06 55.8 65 49.2


User provided reference genes

Program Settings