Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g47473_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 2.8e-47 191.4 87 100.0
MBI06_g33741_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 6.4e-23 110.5 116 54.3
MBI06_g44138_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 6.4e-23 110.5 116 54.3
Nn1g00300 Nelumbo nucifera HOM05D000455 ORTHO05D000434 6.4e-15 84.0 113 43.4
Potri.003G143000 Populus trichocarpa HOM05D000455 ORTHO05D000434 8.4e-15 83.6 116 40.5
TAR629G0003 Trochodendron aralioides HOM05D000455 ORTHO05D000434 9.2e-14 80.1 116 41.4
GSVIVG01019600001 Vitis vinifera HOM05D000455 ORTHO05D000434 9.2e-14 80.1 89 49.4
TAR375G0327 Trochodendron aralioides HOM05D000455 ORTHO05D000434 3.5e-13 78.2 116 41.4
Dinv37495 Davidia involucrata HOM05D002718 ORTHO05D003269 6.0e-13 77.4 112 42.0
Thecc.03G302500 Theobroma cacao HOM05D000455 ORTHO05D000434 6.0e-13 77.4 116 39.7
Duzib205G1505 Durio zibethinus HOM05D000455 ORTHO05D000434 2.3e-12 75.5 116 38.8
Ciclev10018744m.g Citrus clementina HOM05D000455 ORTHO05D000434 8.7e-12 73.6 119 37.8
Gohir.A02G095700 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.1e-11 73.2 116 38.8
Gohir.D03G087700 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.1e-11 73.2 116 38.8
Gorai.003G074300 Gossypium raimondii HOM05D000455 ORTHO05D000434 1.1e-11 73.2 116 38.8
COL.COLO4_10746 Corchorus olitorius HOM05D000455 ORTHO05D000434 1.5e-11 72.8 115 40.9
CsaV3_4G006840 Cucumis sativus L. HOM05D000455 ORTHO05D000434 1.9e-11 72.4 114 36.8
Atru.chr9.1944 Acer truncatum HOM05D000455 ORTHO05D000434 3.3e-11 71.6 118 35.6
Actinidia27304 Actinidia chinensis HOM05D000455 ORTHO05D000434 3.3e-11 71.6 119 39.5
MELO3C016260.2 Cucumis melo HOM05D000455 ORTHO05D000434 3.3e-11 71.6 114 36.8
Manes.02G006700 Manihot esculenta HOM05D000455 ORTHO05D000434 3.3e-11 71.6 116 37.9
Sabra03G0103600 Salix brachista HOM05D000455 ORTHO05D000434 3.3e-11 71.6 116 37.1
Manes.01G053000 Manihot esculenta HOM05D000455 ORTHO05D000434 5.6e-11 70.9 107 39.3
Eucgr.E01022 Eucalyptus grandis HOM05D000455 ORTHO05D000434 9.6e-11 70.1 115 35.7
Cfa011968 Carpinus fangiana HOM05D000455 ORTHO05D000434 1.6e-10 69.3 120 36.7
Haze_09110 Corylus avellana HOM05D000455 ORTHO05D000434 2.1e-10 68.9 121 36.4
Potri.001G087900 Populus trichocarpa HOM05D000455 ORTHO05D000434 2.8e-10 68.6 116 34.5
Hma1.2p1_0359F.1_g135010 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 3.6e-10 68.2 116 37.1
Sabra01G0064300 Salix brachista HOM05D000455 ORTHO05D000434 8.1e-10 67.0 116 35.3
DCAR_029869 Daucus carota HOM05D000455 ORTHO05D000434 2.4e-09 65.5 115 34.8
Gohir.D08G124900 Gossypium hirsutum HOM05D000455 ORTHO05D000434 2.4e-09 65.5 116 35.3
Gorai.004G131700 Gossypium raimondii HOM05D000455 ORTHO05D000434 2.4e-09 65.5 116 35.3
Sc01g0010440 Simmondsia chinensis HOM05D000455 ORTHO05D000434 2.4e-09 65.5 103 39.8
Solyc08g008410.3 Solanum lycopersicum HOM05D000455 ORTHO05D000434 2.4e-09 65.5 125 34.4
Cc08_g16400 Coffea canephora HOM05D000455 ORTHO05D000434 3.1e-09 65.1 117 36.8
Gohir.D09G184100 Gossypium hirsutum HOM05D000455 ORTHO05D000434 4.0e-09 64.7 109 36.7
Gorai.006G206500 Gossypium raimondii HOM05D000455 ORTHO05D000434 4.0e-09 64.7 109 36.7
Actinidia22738 Actinidia chinensis HOM05D000455 ORTHO05D000434 5.3e-09 64.3 119 35.3
CANSAT21G1092 Cannabis sativa HOM05D000455 ORTHO05D000434 5.3e-09 64.3 128 32.8
Nitab4.5_0002367g0110 Nicotiana tabacum HOM05D000455 ORTHO05D000434 5.3e-09 64.3 119 35.3
Sopen08g004270 Solanum pennellii HOM05D000455 ORTHO05D000434 5.3e-09 64.3 125 34.4
Gohir.A09G189300 Gossypium hirsutum HOM05D000455 ORTHO05D000434 6.9e-09 63.9 109 36.7
Sed0008415 Sechium edule HOM05D000455 ORTHO05D000434 9.0e-09 63.5 114 34.2
Ah.12g052850 Amaranthus hybridus HOM05D000455 ORTHO05D000434 1.2e-08 63.2 115 33.0
Phvul.007G071900 Phaseolus vulgaris HOM05D000455 ORTHO05D000434 1.2e-08 63.2 111 34.2
Haze_09108 Corylus avellana HOM05D000455 ORTHO05D000434 1.5e-08 62.8 114 33.3
Peaxi162Scf00102g00189 Petunia axillaris HOM05D000455 ORTHO05D000434 1.5e-08 62.8 119 36.1
PSO170G2314 Papaver somniferum HOM05D000455 ORTHO05D000434 2.6e-08 62.0 119 36.1
Prupe.5G125000 Prunus persica HOM05D000455 ORTHO05D000434 2.6e-08 62.0 114 34.2
CiPaw.12G080700 Carya illinoinensis HOM05D000455 ORTHO05D000434 3.4e-08 61.6 116 32.8
PSO063G2561 Papaver somniferum HOM05D000455 ORTHO05D000434 3.4e-08 61.6 119 35.3
MD06G1111900 Malus domestica HOM05D000455 ORTHO05D000434 4.4e-08 61.2 111 36.0
Lj5g0025579 Lotus japonicus HOM05D000455 ORTHO05D000434 5.8e-08 60.8 118 33.9
Sopen08g030980 Solanum pennellii HOM05D000455 ORTHO05D000434 5.8e-08 60.8 119 35.3
Solyc08g082750.3 Solanum lycopersicum HOM05D000455 ORTHO05D000434 7.6e-08 60.5 119 35.3
VMungo0720G0806 Vigna mungo HOM05D000455 ORTHO05D000434 7.6e-08 60.5 111 33.3
arahy.Tifrunner.gnm1.ann1.0FWB0U Arachis hypogaea HOM05D000455 ORTHO05D000434 9.9e-08 60.1 112 32.1
arahy.Tifrunner.gnm1.ann1.LH2L98 Arachis hypogaea HOM05D000455 ORTHO05D000434 9.9e-08 60.1 112 32.1
FvH4_5g11570 Fragaria vesca HOM05D000455 ORTHO05D000434 9.9e-08 60.1 116 34.5
PGSC0003DMG402012256 Solanum tuberosum HOM05D000455 ORTHO05D000434 9.9e-08 60.1 119 34.5
CAN.G567.35 Capsicum annuum HOM05D000455 ORTHO05D000434 1.3e-07 59.7 94 41.5
FAN18G2932 Fragaria x ananassa HOM05D000455 ORTHO05D000434 1.3e-07 59.7 116 34.5
Hma1.2p1_0440F.1_g153600 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.3e-07 59.7 115 36.5
Nitab4.5_0001962g0080 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.3e-07 59.7 119 34.5
QL02p029599 Quercus lobata HOM05D000455 ORTHO05D000434 1.3e-07 59.7 116 34.5
VMungo0464G0631 Vigna mungo HOM05D000455 ORTHO05D000434 1.7e-07 59.3 119 31.9
Ah.07g197660 Amaranthus hybridus HOM05D000455 ORTHO05D000434 2.2e-07 58.9 116 33.6
Oeu038539.1 Olea europaea HOM05D000455 ORTHO05D000434 2.9e-07 58.5 106 36.8
Peaxi162Scf00074g00543 Petunia axillaris HOM05D000455 ORTHO05D000434 2.9e-07 58.5 116 33.6
PGR042G3480 Punica granatum HOM05D000455 ORTHO05D000434 2.9e-07 58.5 105 36.2
FAN18G2525 Fragaria x ananassa HOM05D000455 ORTHO05D000434 3.8e-07 58.2 116 33.6
MSTRG.13735 Avicennia marina HOM05D000455 ORTHO05D000434 4.9e-07 57.8 113 34.5
Gohir.A08G111800 Gossypium hirsutum HOM05D000455 ORTHO05D000434 4.9e-07 57.8 116 32.8
PGSC0003DMG401005796 Solanum tuberosum HOM05D000455 ORTHO05D000434 4.9e-07 57.8 121 33.1
EL10Ac5g12952 Beta vulgaris HOM05D000455 ORTHO05D000434 6.4e-07 57.4 116 32.8
CAN.G792.32 Capsicum annuum HOM05D000455 ORTHO05D000434 6.4e-07 57.4 90 41.1
FAN04G0646 Fragaria x ananassa HOM05D000455 ORTHO05D000434 6.4e-07 57.4 116 33.6
Glyma.20G160200 Glycine max HOM05D000455 ORTHO05D000434 1.1e-06 56.6 111 32.4
AUR62019876 Chenopodium quinoa HOM05D000455 ORTHO05D000434 1.4e-06 56.2 116 34.5
A01p15300 Brassica napus HOM05D000455 ORTHO05D000434 1.9e-06 55.8 119 35.3
BraA01t01473Z Brassica rapa HOM05D000455 ORTHO05D000434 1.9e-06 55.8 119 35.3
Carub.0007s1707 Capsella rubella HOM05D000455 ORTHO05D000434 3.2e-06 55.1 96 38.5
Hund11373 Selenicereus undatus HOM05D000455 ORTHO05D000434 3.2e-06 55.1 115 31.3
AUR62007012 Chenopodium quinoa HOM05D000455 ORTHO05D000434 4.2e-06 54.7 116 33.6
Dinv26453 Davidia involucrata HOM05D000455 ORTHO05D000434 4.2e-06 54.7 111 34.2
FAN08G0575 Fragaria x ananassa HOM05D000455 ORTHO05D000434 4.2e-06 54.7 111 34.2
TPR.G26977 Trifolium pratense HOM05D000455 ORTHO05D000434 4.2e-06 54.7 114 31.6
CiPaw.11G116600 Carya illinoinensis HOM05D000455 ORTHO05D000434 5.4e-06 54.3 94 36.2
Ca_10746_v3 Cicer arietinum L. HOM05D000455 ORTHO05D000434 7.1e-06 53.9 112 30.4
ClCG07G011370 Citrullus lanatus HOM05D000455 ORTHO05D000434 7.1e-06 53.9 53 43.4
Glyma.10G234100 Glycine max HOM05D000455 ORTHO05D000434 7.1e-06 53.9 104 31.7
BcaC09g50921 Brassica carinata HOM05D000455 ORTHO05D000434 9.3e-06 53.5 97 37.1
C01p19230 Brassica napus HOM05D000455 ORTHO05D000434 9.3e-06 53.5 97 37.1


User provided reference genes

Program Settings