Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 3.9e-301 1037.3 520 100.0
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 1.8e-168 596.7 472 63.3
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 9.0e-157 557.8 472 60.0
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 4.5e-156 555.4 464 60.1
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 6.5e-155 551.6 465 59.6
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 8.5e-155 551.2 473 58.1
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 1.2e-153 547.4 471 60.5
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 1.0e-152 544.3 467 58.9
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 2.3e-152 543.1 468 58.8
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 6.7e-152 541.6 460 58.9
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 8.8e-152 541.2 478 57.9
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 1.1e-151 540.8 471 57.3
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 1.5e-151 540.4 469 57.1
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 5.7e-151 538.5 471 59.0
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 1.3e-150 537.3 468 57.3
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 2.8e-150 536.2 471 58.6
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 4.8e-150 535.4 474 57.6
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 6.3e-150 535.0 471 58.2
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 8.2e-150 534.6 467 58.0
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 1.8e-149 533.5 472 57.2
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 4.1e-149 532.3 471 58.0
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.0e-148 530.0 396 63.9
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 1.3e-147 527.3 469 57.4
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 2.9e-147 526.2 459 59.9
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 8.5e-147 524.6 469 57.8
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 1.9e-146 523.5 420 62.1
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 9.4e-146 521.2 462 57.4
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 1.6e-145 520.4 433 59.1
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 1.6e-145 520.4 466 56.9
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 4.7e-145 518.8 463 55.1
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 6.1e-145 518.5 471 54.6
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 1.4e-144 517.3 467 55.9
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 3.9e-144 515.8 471 56.3
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 6.7e-144 515.0 469 54.6
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 8.8e-144 514.6 463 55.5
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 4.4e-143 512.3 467 57.4
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 5.7e-143 511.9 476 55.9
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 1.7e-142 510.4 466 55.2
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 4.8e-142 508.8 471 56.1
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 1.1e-141 507.7 472 56.4
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 2.4e-141 506.5 475 54.7
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 3.1e-141 506.1 468 54.7
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 7.0e-141 505.0 466 53.9
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 9.1e-141 504.6 473 55.0
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.2e-140 504.2 421 58.0
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.5e-140 503.8 468 56.6
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 2.6e-140 503.1 420 59.0
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 4.5e-140 502.3 436 56.2
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 4.5e-140 502.3 463 57.0
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 4.5e-140 502.3 384 62.2
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.0e-139 501.1 415 61.0
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 1.7e-139 500.4 422 59.7
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 1.7e-139 500.4 459 55.3
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 2.2e-139 500.0 417 58.0
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 2.2e-139 500.0 418 58.4
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 2.9e-139 499.6 469 54.2
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 3.8e-139 499.2 479 53.2
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 5.0e-139 498.8 478 53.8
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 5.0e-139 498.8 419 60.4
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 1.1e-138 497.7 418 58.6
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.5e-138 497.3 459 57.1
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 2.5e-138 496.5 482 54.4
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 3.2e-138 496.1 398 60.6
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 1.2e-137 494.2 404 58.9
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 1.2e-137 494.2 443 55.5
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 2.1e-137 493.4 475 52.2
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 2.7e-137 493.0 404 59.2
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.0e-136 491.1 420 57.6
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 1.4e-136 490.7 459 53.4
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 2.3e-136 490.0 461 53.8
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 5.2e-136 488.8 476 54.4
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 4.4e-135 485.7 475 51.6
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 7.5e-135 485.0 460 52.4
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 2.8e-134 483.0 432 57.6
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 1.1e-133 481.1 472 53.0
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 1.1e-133 481.1 388 60.1
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 4.1e-133 479.2 458 53.5
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 4.1e-133 479.2 419 59.7
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 5.3e-133 478.8 436 55.0
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 9.1e-133 478.0 458 52.4
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 1.6e-132 477.2 457 52.5
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 5.9e-132 475.3 418 56.5
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 1.5e-130 470.7 443 53.7
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 4.7e-129 465.7 408 56.9
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 6.1e-129 465.3 467 52.5
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 4.0e-128 462.6 354 62.7
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 5.2e-128 462.2 468 51.1
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 8.8e-128 461.5 476 51.7
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 4.1e-125 452.6 473 50.3
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 5.9e-124 448.7 498 48.2
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 8.5e-123 444.9 384 57.3
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 6.1e-121 438.7 354 61.0
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.2e-118 430.3 463 50.8
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 1.8e-117 427.2 466 50.9
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 4.7e-113 412.5 381 57.0
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 1.7e-94 350.9 363 49.3
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 3.0e-91 340.1 399 43.1
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 1.8e-88 330.9 286 56.6
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.6e-84 317.8 455 39.3
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 5.1e-83 312.8 316 53.2
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 7.3e-82 308.9 373 44.2
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.5e-79 301.2 376 44.4
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 2.6e-79 300.4 360 45.3
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.5e-74 284.6 238 58.8
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 8.4e-70 268.9 432 35.6
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.1e-66 258.5 386 39.9
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 2.5e-53 214.2 409 31.1
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 5.1e-51 206.5 215 51.2
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 1.3e-43 181.8 149 59.7
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 2.2e-33 147.9 119 62.2
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 6.5e-30 136.3 146 50.0
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.7e-14 85.1 50 72.0
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 2.9e-14 84.3 59 64.4
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 6.3e-09 66.6 54 57.4
SEGI_30730 Sequoiadendron giganteum HOM05D001772 ORTHO05D002270 1.2e-07 62.4 87 39.1


User provided reference genes

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