Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 9.4e-50 199.9 102 100.0
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 9.4e-50 199.9 102 100.0
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 1.1e-26 123.2 93 65.6
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 4.7e-25 117.9 87 64.4
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 8.0e-25 117.1 75 74.7
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 5.2e-24 114.4 86 62.8
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 8.9e-24 113.6 80 70.0
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.2e-23 113.2 77 70.1
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.5e-23 112.8 87 60.9
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 2.0e-23 112.5 89 65.2
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.6e-23 112.1 86 66.3
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 3.4e-23 111.7 98 61.2
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 3.4e-23 111.7 78 74.4
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 4.4e-23 111.3 78 69.2
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.4e-23 111.3 74 71.6
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 4.4e-23 111.3 88 62.5
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 4.4e-23 111.3 89 66.3
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 7.5e-23 110.5 86 61.6
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 7.5e-23 110.5 105 57.1
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 9.8e-23 110.2 79 69.6
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.7e-22 109.4 94 63.8
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 2.2e-22 109.0 74 70.3
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.2e-22 109.0 77 67.5
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 2.2e-22 109.0 93 63.4
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 2.8e-22 108.6 90 66.7
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 2.8e-22 108.6 95 62.1
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 2.8e-22 108.6 76 69.7
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 3.7e-22 108.2 70 71.4
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 3.7e-22 108.2 80 65.0
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 4.9e-22 107.8 71 76.1
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 6.3e-22 107.5 79 67.1
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.1e-21 106.7 77 68.8
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.1e-21 106.7 83 61.4
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 1.1e-21 106.7 95 60.0
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 1.4e-21 106.3 70 70.0
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.4e-21 106.3 87 60.9
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.4e-21 106.3 75 66.7
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 2.4e-21 105.5 77 70.1
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 2.4e-21 105.5 98 56.1
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 2.4e-21 105.5 81 64.2
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 3.1e-21 105.1 95 56.8
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 3.1e-21 105.1 80 65.0
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 4.1e-21 104.8 94 57.4
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 5.4e-21 104.4 90 63.3
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 7.0e-21 104.0 77 64.9
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 9.2e-21 103.6 71 70.4
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 9.2e-21 103.6 82 63.4
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 9.2e-21 103.6 82 63.4
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 1.2e-20 103.2 76 64.5
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 1.2e-20 103.2 71 73.2
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.2e-20 103.2 73 68.5
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.2e-20 103.2 86 60.5
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 1.6e-20 102.8 78 62.8
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.6e-20 102.8 73 68.5
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.6e-20 102.8 86 60.5
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 1.6e-20 102.8 86 60.5
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.6e-20 102.8 87 59.8
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 2.0e-20 102.4 88 61.4
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 2.7e-20 102.1 95 57.9
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.7e-20 102.1 77 64.9
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 2.7e-20 102.1 73 68.5
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 3.5e-20 101.7 94 57.4
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 3.5e-20 101.7 78 64.1
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.5e-20 101.7 64 71.9
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 4.5e-20 101.3 103 57.3
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 4.5e-20 101.3 79 60.8
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 4.5e-20 101.3 75 65.3
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 5.9e-20 100.9 67 71.6
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 7.8e-20 100.5 100 56.0
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 7.8e-20 100.5 73 63.0
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 7.8e-20 100.5 73 64.4
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 7.8e-20 100.5 95 56.8
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.0e-19 100.1 73 68.5
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.3e-19 99.8 73 64.4
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.3e-19 99.8 82 65.9
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.3e-19 99.8 82 65.9
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.7e-19 99.4 73 63.0
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.7e-19 99.4 101 52.5
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 1.7e-19 99.4 101 54.5
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 2.3e-19 99.0 73 63.0
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 2.3e-19 99.0 76 63.2
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 2.3e-19 99.0 88 62.5
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 2.9e-19 98.6 88 62.5
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 2.9e-19 98.6 79 59.5
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 2.9e-19 98.6 79 59.5
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 3.8e-19 98.2 81 67.9
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 5.0e-19 97.8 73 61.6
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 5.0e-19 97.8 79 59.5
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 6.6e-19 97.4 80 56.2
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 6.6e-19 97.4 70 68.6
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 6.6e-19 97.4 69 63.8
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 8.6e-19 97.1 81 58.0
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 8.6e-19 97.1 65 70.8
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 1.1e-18 96.7 74 59.5
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 1.1e-18 96.7 74 59.5
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 1.1e-18 96.7 74 59.5
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 1.1e-18 96.7 70 64.3
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 1.1e-18 96.7 88 59.1
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.1e-18 96.7 87 58.6
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 1.5e-18 96.3 80 60.0
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.5e-18 96.3 80 55.0
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 1.9e-18 95.9 81 56.8
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 1.9e-18 95.9 81 56.8
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 1.9e-18 95.9 97 54.6
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 1.9e-18 95.9 93 58.1
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.5e-18 95.5 63 66.7
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.5e-18 95.5 63 66.7
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 4.3e-18 94.7 80 56.2
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 7.3e-18 94.0 74 58.1
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 2.1e-17 92.4 61 65.6
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.1e-17 92.4 83 55.4
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 2.8e-17 92.0 82 57.3
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 1.4e-16 89.7 103 49.5
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 2.3e-16 89.0 73 58.9
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 4.0e-16 88.2 58 70.7
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 1.2e-15 86.7 74 59.5
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 1.5e-15 86.3 91 49.5
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 2.0e-15 85.9 65 58.5
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 2.6e-15 85.5 110 46.4
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-14 83.2 48 75.0
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 6.4e-14 80.9 65 61.5
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.1e-13 80.1 93 44.1
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 5.0e-11 71.2 45 64.4
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 6.6e-11 70.9 70 47.1
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 1.2e-09 66.6 60 50.0
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 2.8e-09 65.5 70 44.3
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.7e-06 56.2 43 69.8


User provided reference genes

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