Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g42158_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 1.1e-116 423.3 224 100.0
MBI09_g30145_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 9.4e-103 377.1 292 67.1
MBI10_g21110_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 3.5e-65 252.3 169 77.5
MBI14_g39539_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 1.4e-61 240.4 152 77.0
MBI14_g47232_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 5.2e-61 238.4 170 71.8
MBI14_g45081_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 2.6e-60 236.1 170 71.2
MBI14_g46379_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 6.9e-37 158.3 170 55.3
MBI18_g06815_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 4.2e-34 149.1 174 47.1
MBI18_g41998_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 2.3e-32 143.3 129 56.6
Medtr1g021825 Medicago truncatula HOM05D000312 ORTHO05D000221 2.0e-12 77.0 163 31.3
Dinv36032 Davidia involucrata HOM05D000312 ORTHO05D000221 3.4e-12 76.3 161 29.8
Medtr4g057725 Medicago truncatula HOM05D000312 ORTHO05D000221 5.9e-12 75.5 162 27.8
Manes.05G164400 Manihot esculenta HOM05D000312 ORTHO05D000221 7.7e-12 75.1 169 29.6
BcaB07g31914 Brassica carinata HOM05D004079 ORTHO05D005437 1.3e-11 74.3 39 84.6
FvH4_3g33042 Fragaria vesca HOM05D000312 ORTHO05D000221 2.9e-11 73.2 135 31.1
Lj2g0022361 Lotus japonicus HOM05D000312 ORTHO05D000221 2.9e-11 73.2 155 31.6
vmacro04489 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 2.9e-11 73.2 114 36.8
Lj2g0012626 Lotus japonicus HOM05D000312 ORTHO05D000221 3.8e-11 72.8 117 35.9
FAN15G3436 Fragaria x ananassa HOM05D000312 ORTHO05D000221 5.0e-11 72.4 163 29.4
Medtr1g014450 Medicago truncatula HOM05D000312 ORTHO05D000221 6.5e-11 72.0 83 41.0
RcHm_v2.0_Chr6g0295991 Rosa chinensis HOM05D000312 ORTHO05D000221 6.5e-11 72.0 139 29.5
FAN11G1830 Fragaria x ananassa HOM05D000312 ORTHO05D000221 8.5e-11 71.6 135 30.4
Cc10_g03500 Coffea canephora HOM05D000312 ORTHO05D000221 1.1e-10 71.2 154 29.9
Rhsim07G0234700 Rhododendron simsii HOM05D000312 ORTHO05D000221 1.1e-10 71.2 114 36.0
TPR.G11874 Trifolium pratense HOM05D004079 ORTHO05D005437 1.1e-10 71.2 43 79.1
Gohir.A05G260480 Gossypium hirsutum HOM05D000312 ORTHO05D000221 1.4e-10 70.9 165 27.9
MBI18_g07596_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 1.4e-10 70.9 107 30.8
Medtr1g021820 Medicago truncatula HOM05D000312 ORTHO05D000221 1.4e-10 70.9 116 34.5
Sopen04g033380 Solanum pennellii HOM05D000312 ORTHO05D000221 1.4e-10 70.9 165 27.9
MSTRG.25133 Avicennia marina HOM05D000312 ORTHO05D000221 2.5e-10 70.1 114 34.2
BcaB03g14475 Brassica carinata HOM05D004079 ORTHO05D005437 2.5e-10 70.1 42 71.4
FvH4_3g20160 Fragaria vesca HOM05D000312 ORTHO05D000221 3.2e-10 69.7 113 35.4
arahy.Tifrunner.gnm1.ann1.S3SMBV Arachis hypogaea HOM05D000312 ORTHO05D000221 5.5e-10 68.9 163 29.4
arahy.Tifrunner.gnm1.ann1.X6923X Arachis hypogaea HOM05D000312 ORTHO05D000221 5.5e-10 68.9 163 29.4
FAN24G1808 Fragaria x ananassa HOM05D000312 ORTHO05D000221 5.5e-10 68.9 120 30.0
Medtr1g011410 Medicago truncatula HOM05D000312 ORTHO05D000221 5.5e-10 68.9 114 36.0
Lsat_1_v5_gn_6_113140 Lactuca sativa HOM05D000312 ORTHO05D000221 7.2e-10 68.6 116 32.8
MSTRG.7707 Avicennia marina HOM05D000312 ORTHO05D000221 9.4e-10 68.2 114 33.3
Ca_05128_v3 Cicer arietinum L. HOM05D000312 ORTHO05D000221 9.4e-10 68.2 104 35.6
Medtr2g047872 Medicago truncatula HOM05D000312 ORTHO05D000221 9.4e-10 68.2 161 29.8
HanXRQChr08g0223621 Helianthus annuus HOM05D000312 ORTHO05D000221 1.2e-09 67.8 114 31.6
RcHm_v2.0_Chr7g0205971 Rosa chinensis HOM05D000312 ORTHO05D000221 1.2e-09 67.8 163 27.0
Zm00001eb134070 Zea mays HOM05D000312 ORTHO05D015704 1.2e-09 67.8 39 76.9
Lj4A46T100 Lonicera japonica HOM05D000312 ORTHO05D000221 1.6e-09 67.4 103 35.9
MD05G1157200 Malus domestica HOM05D000312 ORTHO05D000221 1.6e-09 67.4 145 30.3
MD05G1157700 Malus domestica HOM05D000312 ORTHO05D000221 1.6e-09 67.4 140 30.7
Actinidia26998 Actinidia chinensis HOM05D007484 ORTHO05D008290 2.1e-09 67.0 132 31.8
Ciclev10001223m.g Citrus clementina HOM05D000312 ORTHO05D000221 2.7e-09 66.6 163 29.4
RcHm_v2.0_Chr5g0033971 Rosa chinensis HOM05D000312 ORTHO05D000221 2.7e-09 66.6 107 33.6
RcHm_v2.0_Chr5g0033951 Rosa chinensis HOM05D000312 ORTHO05D000221 3.6e-09 66.2 113 32.7
Medtr1g013560 Medicago truncatula HOM05D000312 ORTHO05D000221 4.6e-09 65.9 114 33.3
Actinidia38025 Actinidia chinensis HOM05D000312 ORTHO05D000221 7.9e-09 65.1 114 30.7
Aqoxy6G00975 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 7.9e-09 65.1 124 29.0
A06p09620 Brassica napus HOM05D003083 ORTHO05D003466 7.9e-09 65.1 113 37.2
BraA06t24153Z Brassica rapa HOM05D000312 ORTHO05D000221 7.9e-09 65.1 113 37.2
FvH4_2g27100 Fragaria vesca HOM05D000312 ORTHO05D000221 7.9e-09 65.1 116 29.3
ATR0820G286 Amborella trichopoda HOM05D000312 ORTHO05D000221 1.0e-08 64.7 114 34.2
Haze_11828 Corylus avellana HOM05D000312 ORTHO05D000221 1.4e-08 64.3 165 28.5
QL03p046814 Quercus lobata HOM05D000312 ORTHO05D000221 1.8e-08 63.9 165 27.3
BcaB02g06451 Brassica carinata HOM05D000312 ORTHO05D000221 2.3e-08 63.5 113 36.3
BcaB02g06452 Brassica carinata HOM05D000312 ORTHO05D000221 2.3e-08 63.5 113 36.3
CiPaw.16G053000 Carya illinoinensis HOM05D000312 ORTHO05D000221 2.3e-08 63.5 114 33.3
Lsat_1_v5_gn_8_37720 Lactuca sativa HOM05D000312 ORTHO05D000221 2.3e-08 63.5 114 32.5
Medtr1g013840 Medicago truncatula HOM05D000312 ORTHO05D000221 2.3e-08 63.5 115 32.2
Medtr2g091145 Medicago truncatula HOM05D000312 ORTHO05D000221 2.3e-08 63.5 123 32.5
BcaC05g25249 Brassica carinata HOM05D000312 ORTHO05D000221 3.0e-08 63.2 113 36.3
C05p11330 Brassica napus HOM05D003083 ORTHO05D003466 3.0e-08 63.2 113 36.3
BolC5t29883H Brassica oleracea HOM05D000312 ORTHO05D000221 3.0e-08 63.2 113 36.3
CAN.G10.6 Capsicum annuum HOM05D000312 ORTHO05D000221 3.0e-08 63.2 114 35.1
Ciclev10026961m.g Citrus clementina HOM05D001477 ORTHO05D001182 3.0e-08 63.2 112 32.1
FAN25G2112 Fragaria x ananassa HOM05D000312 ORTHO05D000221 3.9e-08 62.8 113 33.6
Medtr1g028860 Medicago truncatula HOM05D000312 ORTHO05D000221 3.9e-08 62.8 83 37.3
Glyma.17G247500 Glycine max HOM05D000312 ORTHO05D000221 5.1e-08 62.4 163 28.8
Medtr1g013580 Medicago truncatula HOM05D000312 ORTHO05D000221 5.1e-08 62.4 114 32.5
PGR083G1286 Punica granatum HOM05D000312 ORTHO05D000221 5.1e-08 62.4 114 32.5
TAR371G0043 Trochodendron aralioides HOM05D000312 ORTHO05D000221 5.1e-08 62.4 112 33.0
TAR371G0228 Trochodendron aralioides HOM05D000312 ORTHO05D000221 5.1e-08 62.4 113 31.9
Migut.L01131 Erythranthe guttata HOM05D000312 ORTHO05D000221 6.7e-08 62.0 114 29.8
PGSC0003DMG402013246 Solanum tuberosum HOM05D000312 ORTHO05D000221 6.7e-08 62.0 135 29.6
MD05G1157800 Malus domestica HOM05D000312 ORTHO05D000221 8.8e-08 61.6 115 33.0
Actinidia29845 Actinidia chinensis HOM05D000312 ORTHO05D000221 1.1e-07 61.2 112 31.2
ATR0584G249 Amborella trichopoda HOM05D000312 ORTHO05D000221 1.5e-07 60.8 133 30.1
Aqoxy5G04271 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 1.5e-07 60.8 124 27.4
Eucgr.A00476 Eucalyptus grandis HOM05D000312 ORTHO05D000221 1.5e-07 60.8 188 27.1
Eucgr.A00477 Eucalyptus grandis HOM05D000312 ORTHO05D000221 1.5e-07 60.8 163 25.2
RcHm_v2.0_Chr4g0436781 Rosa chinensis HOM05D000312 ORTHO05D000221 1.5e-07 60.8 166 28.3
TPR.G32739 Trifolium pratense HOM05D000312 ORTHO05D000221 1.5e-07 60.8 107 28.0
Dinv16564 Davidia involucrata HOM05D000312 ORTHO05D000221 2.0e-07 60.5 114 32.5
PGSC0003DMG400044760 Solanum tuberosum HOM05D000312 ORTHO05D000221 2.0e-07 60.5 144 29.9
AUR62033859 Chenopodium quinoa HOM05D000312 ORTHO05D000221 2.6e-07 60.1 165 27.3
Psat6g024480 Pisum sativum HOM05D000312 ORTHO05D000221 2.6e-07 60.1 81 37.0
Solyc11g011230.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 2.6e-07 60.1 133 31.6
GSVIVG01009630001 Vitis vinifera HOM05D000312 ORTHO05D000221 2.6e-07 60.1 91 37.4
Manes.08G140800 Manihot esculenta HOM05D000312 ORTHO05D000221 3.3e-07 59.7 130 28.5
Nn5g27409 Nelumbo nucifera HOM05D000576 ORTHO05D000368 4.4e-07 59.3 81 37.0
RcHm_v2.0_Chr6g0248681 Rosa chinensis HOM05D000312 ORTHO05D000221 4.4e-07 59.3 110 29.1
FAN22G1051 Fragaria x ananassa HOM05D000312 ORTHO05D000221 5.7e-07 58.9 167 28.1
Nn1g03911 Nelumbo nucifera HOM05D000576 ORTHO05D003312 5.7e-07 58.9 83 37.3
Potri.004G034500 Populus trichocarpa HOM05D007484 ORTHO05D008290 5.7e-07 58.9 148 27.0
Peaxi162Scf00635g00718 Petunia axillaris HOM05D000312 ORTHO05D000221 7.4e-07 58.5 104 31.7
Dinv40482 Davidia involucrata HOM05D007484 ORTHO05D008290 9.7e-07 58.2 133 33.8
FAN17G1745 Fragaria x ananassa HOM05D000312 ORTHO05D000221 9.7e-07 58.2 167 28.1
MBI18_g07602_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D008290 9.7e-07 58.2 80 35.0
FvH4_4g28670 Fragaria vesca HOM05D000312 ORTHO05D000221 1.3e-06 57.8 167 27.5
Nitab4.5_0000149g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.3e-06 57.8 143 30.1
Rhsim12G0068100 Rhododendron simsii HOM05D000312 ORTHO05D000221 2.2e-06 57.0 107 32.7
RcHm_v2.0_Chr5g0049261 Rosa chinensis HOM05D000312 ORTHO05D000221 2.2e-06 57.0 119 30.3
FAN14G5862 Fragaria x ananassa HOM05D004140 ORTHO05D006116 2.8e-06 56.6 124 31.5
ATR0584G144 Amborella trichopoda HOM05D000312 ORTHO05D000221 3.7e-06 56.2 111 30.6
Lj6A770T46 Lonicera japonica HOM05D000312 ORTHO05D000221 3.7e-06 56.2 114 31.6
FvH4_4g18592 Fragaria vesca HOM05D000312 ORTHO05D000221 4.8e-06 55.8 94 34.0
Nn4g23616 Nelumbo nucifera HOM05D000312 ORTHO05D000221 4.8e-06 55.8 111 30.6
vmacro10488 Vaccinium macrocarpon HOM05D000312 ORTHO05D000221 4.8e-06 55.8 104 30.8
RcHm_v2.0_Chr6g0248791 Rosa chinensis HOM05D000312 ORTHO05D000221 6.3e-06 55.5 119 31.1
HPP92_022104 Vanilla planifolia HOM05D000312 ORTHO05D000221 6.3e-06 55.5 114 27.2
Dinv16566 Davidia involucrata HOM05D000312 ORTHO05D000221 8.2e-06 55.1 105 31.4
FvH4_6g18740 Fragaria vesca HOM05D000312 ORTHO05D000221 8.2e-06 55.1 126 29.4
FAN18G1664 Fragaria x ananassa HOM05D000312 ORTHO05D000221 8.2e-06 55.1 110 30.9
Nitab4.5_0005124g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 8.2e-06 55.1 106 31.1
Peaxi162Scf00003g00813 Petunia axillaris HOM05D000312 ORTHO05D000221 8.2e-06 55.1 104 31.7
Psat6g025480 Pisum sativum HOM05D000312 ORTHO05D000221 8.2e-06 55.1 89 33.7


User provided reference genes

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