Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 4.4e-161 571.2 290 100.0
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 6.2e-123 444.5 294 77.6
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.4e-119 432.6 289 78.2
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.7e-115 418.7 291 75.3
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.3e-112 410.2 290 73.4
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.4e-111 406.8 286 73.4
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.5e-111 406.0 242 83.9
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.5e-111 404.8 288 74.7
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 5.5e-111 404.8 290 72.4
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 5.5e-111 404.8 242 83.9
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 5.5e-111 404.8 241 82.2
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 7.1e-111 404.4 251 79.7
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 9.3e-111 404.1 237 84.4
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.7e-110 402.5 286 72.7
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.7e-110 402.5 235 84.7
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 4.6e-110 401.7 238 83.2
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 6.0e-110 401.4 239 82.4
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.3e-109 400.2 296 71.6
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 3.0e-109 399.1 235 83.0
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 3.9e-109 398.7 273 73.6
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 8.7e-109 397.5 285 71.6
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.1e-108 397.1 285 72.3
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.1e-108 397.1 293 72.0
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.9e-108 396.4 236 80.9
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 3.3e-108 395.6 281 72.2
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 3.3e-108 395.6 254 76.8
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 5.7e-108 394.8 302 70.2
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 3.7e-107 392.1 264 74.2
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 4.8e-107 391.7 294 70.7
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 6.3e-107 391.3 283 71.4
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.1e-106 390.6 249 77.9
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.8e-106 389.8 234 81.2
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.8e-106 389.8 235 82.1
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 2.4e-106 389.4 284 71.8
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.1e-106 389.0 297 71.0
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 5.3e-106 388.3 312 66.7
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 6.9e-106 387.9 273 72.2
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 9.0e-106 387.5 236 81.4
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 9.0e-106 387.5 286 70.3
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.5e-105 386.7 285 70.9
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.5e-105 386.7 294 71.1
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.5e-105 386.7 276 71.4
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.0e-105 386.3 278 71.6
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 2.0e-105 386.3 244 79.1
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 4.5e-105 385.2 292 68.8
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 4.5e-105 385.2 240 78.3
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.0e-104 384.0 286 69.9
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.7e-104 383.3 268 72.8
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 2.2e-104 382.9 298 71.1
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 1.9e-103 379.8 264 73.1
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.5e-103 379.4 287 68.6
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 3.2e-103 379.0 289 68.9
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 3.2e-103 379.0 258 72.9
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 7.2e-103 377.9 234 78.6
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.2e-102 377.1 294 68.4
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.2e-102 377.1 280 70.4
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.7e-102 375.9 283 69.3
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.7e-102 375.9 233 79.4
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 2.7e-102 375.9 251 78.9
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 3.6e-102 375.6 236 80.9
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 4.6e-102 375.2 266 72.9
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 1.0e-101 374.0 288 69.8
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.8e-101 373.2 244 75.8
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 6.7e-101 371.3 235 74.9
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 6.7e-101 371.3 282 69.1
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 2.5e-100 369.4 288 68.8
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 3.3e-100 369.0 236 77.5
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 5.7e-100 368.2 256 71.9
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 5.7e-100 368.2 233 80.3
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 5.7e-100 368.2 254 72.4
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 7.4e-100 367.9 288 67.0
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 7.4e-100 367.9 232 79.3
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 7.4e-100 367.9 289 67.1
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 1.3e-99 367.1 289 69.2
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 2.8e-99 365.9 232 78.0
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 2.8e-99 365.9 232 78.0
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.8e-99 365.9 232 79.3
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 2.8e-99 365.9 289 68.9
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 3.7e-99 365.5 232 77.6
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 3.7e-99 365.5 232 77.6
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.8e-98 363.2 272 71.0
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 2.4e-98 362.8 234 77.4
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 3.1e-98 362.5 209 82.8
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 4.1e-98 362.1 315 61.9
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 9.0e-98 360.9 251 72.1
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.2e-97 360.5 232 77.2
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 1.5e-97 360.1 232 77.2
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.5e-97 360.1 232 77.6
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 5.9e-97 358.2 231 73.6
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.7e-96 356.7 234 74.8
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 8.5e-96 354.4 343 59.5
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.5e-95 352.8 238 72.3
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.5e-95 351.7 233 74.7
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.5e-95 351.7 233 74.7
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.5e-95 351.7 233 74.7
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 7.2e-95 351.3 233 74.7
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.8e-93 346.7 217 79.3
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 5.3e-90 335.1 233 70.0
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.3e-80 303.9 287 58.9
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.0e-80 302.0 219 72.6
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 5.5e-79 298.5 276 62.3
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 2.0e-76 290.0 242 60.3
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.9e-73 278.5 207 68.6
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 7.7e-73 278.1 243 59.3
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 2.5e-71 273.1 202 65.3
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.4e-69 267.3 220 66.4
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 8.8e-69 264.6 172 74.4
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 4.5e-65 252.3 211 61.1
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.9e-43 179.1 271 45.4
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 3.4e-36 156.4 176 54.0
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 3.9e-32 142.9 194 41.8
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 3.9e-32 142.9 229 38.9
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.9e-32 142.9 93 78.5
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.5e-28 131.0 158 39.9
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 4.4e-28 129.4 93 74.2
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 2.9e-27 126.7 88 71.6
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 4.6e-25 119.4 130 46.9
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.3e-08 64.7 52 57.7
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 1.8e-08 64.3 115 37.4


User provided reference genes

Program Settings