Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.8e-131 472.6 244 100.0
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 1.2e-66 257.3 222 63.5
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 1.0e-65 254.2 221 65.6
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.1e-64 250.8 198 68.2
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 3.2e-64 249.2 191 68.1
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 4.2e-64 248.8 192 68.8
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 4.2e-64 248.8 193 67.4
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 1.2e-63 247.3 196 68.9
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 4.7e-63 245.4 229 59.4
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 4.7e-63 245.4 238 59.2
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 8.0e-63 244.6 202 65.8
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 8.0e-63 244.6 221 58.8
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 2.3e-62 243.0 192 67.2
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 2.3e-62 243.0 211 64.5
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 3.9e-62 242.3 225 59.1
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 3.9e-62 242.3 199 63.8
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 6.7e-62 241.5 229 59.0
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 6.7e-62 241.5 211 64.0
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 6.7e-62 241.5 159 76.7
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 6.7e-62 241.5 215 61.9
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 1.1e-61 240.7 229 59.0
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 1.1e-61 240.7 229 59.0
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 1.1e-61 240.7 228 58.8
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 1.1e-61 240.7 165 73.9
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 1.5e-61 240.4 194 64.9
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 1.5e-61 240.4 170 71.2
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 2.0e-61 240.0 232 59.9
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 2.6e-61 239.6 192 66.1
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 2.6e-61 239.6 221 60.6
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 2.6e-61 239.6 221 59.3
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 3.3e-61 239.2 203 64.0
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 3.3e-61 239.2 228 60.5
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 3.3e-61 239.2 210 60.5
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 3.3e-61 239.2 220 61.8
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 4.4e-61 238.8 220 58.2
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 9.7e-61 237.7 217 59.4
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.3e-60 237.3 198 63.1
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.7e-60 236.9 161 73.3
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 2.2e-60 236.5 229 58.5
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 2.2e-60 236.5 191 64.9
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 2.8e-60 236.1 230 58.7
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 2.8e-60 236.1 224 59.8
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 4.8e-60 235.3 159 74.8
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 4.8e-60 235.3 235 56.2
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 6.3e-60 235.0 225 57.3
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 8.2e-60 234.6 205 63.4
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 1.4e-59 233.8 219 58.0
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 1.4e-59 233.8 221 56.6
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 4.1e-59 232.3 218 58.7
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 4.1e-59 232.3 230 56.5
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 4.1e-59 232.3 225 58.2
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 5.3e-59 231.9 229 56.8
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 5.3e-59 231.9 222 57.2
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 7.0e-59 231.5 221 55.7
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 7.0e-59 231.5 231 56.7
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 9.1e-59 231.1 208 61.5
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 1.2e-58 230.7 222 58.6
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 1.2e-58 230.7 201 60.7
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 2.0e-58 229.9 228 56.6
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 2.0e-58 229.9 215 57.2
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 3.5e-58 229.2 236 55.9
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 3.5e-58 229.2 223 56.5
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 3.5e-58 229.2 201 60.2
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 5.9e-58 228.4 227 57.7
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 5.9e-58 228.4 214 59.8
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 5.9e-58 228.4 243 54.3
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 7.7e-58 228.0 157 72.6
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 7.7e-58 228.0 169 68.6
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 1.0e-57 227.6 201 62.2
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.0e-57 227.6 252 54.8
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.0e-57 227.6 196 62.2
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-57 227.3 191 61.3
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 1.3e-57 227.3 209 60.8
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 1.3e-57 227.3 204 59.8
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 1.7e-57 226.9 197 59.4
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 1.7e-57 226.9 228 56.1
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 1.7e-57 226.9 249 55.0
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.7e-57 226.9 211 56.9
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 2.2e-57 226.5 186 64.5
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 2.2e-57 226.5 251 55.4
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 2.9e-57 226.1 191 60.7
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 3.8e-57 225.7 236 55.1
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 3.8e-57 225.7 215 57.7
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 5.0e-57 225.3 193 61.7
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 1.9e-56 223.4 235 56.2
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 1.9e-56 223.4 154 72.1
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 2.5e-56 223.0 164 65.2
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 9.4e-56 221.1 192 62.5
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 1.2e-55 220.7 159 67.9
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 2.1e-55 219.9 222 56.8
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 2.7e-55 219.5 198 59.6
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 3.6e-55 219.2 219 54.8
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 8.0e-55 218.0 189 62.4
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 1.8e-54 216.9 185 60.0
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 2.3e-54 216.5 210 56.7
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 3.0e-54 216.1 245 52.7
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.8e-51 206.8 235 54.9
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 8.0e-47 191.4 161 60.2
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 2.3e-46 189.9 159 59.7
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 2.0e-45 186.8 139 68.3
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 4.8e-44 182.2 158 58.2
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 6.3e-44 181.8 164 56.1
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.7e-41 173.7 185 51.4
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 3.8e-41 172.6 187 50.3
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 1.9e-40 170.2 160 59.4
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 7.2e-40 168.3 155 55.5
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 3.0e-38 162.9 203 49.8
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 9.2e-35 151.4 94 81.9
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 1.0e-33 147.9 164 47.6
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.0e-33 147.9 90 80.0
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.8e-31 139.8 155 47.1
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 6.1e-31 138.7 157 50.3
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 1.8e-30 137.1 156 46.2
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 2.6e-29 133.3 93 67.7
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 3.4e-29 132.9 157 48.4
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 8.3e-28 128.3 84 75.0
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 2.7e-26 123.2 81 74.1
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 5.0e-25 119.0 85 69.4
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 1.1e-24 117.9 163 41.7
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 3.1e-22 109.8 97 62.9
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 1.2e-21 107.8 116 51.7
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 2.6e-21 106.7 161 43.5
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 9.8e-21 104.8 137 51.8
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 4.9e-20 102.4 116 51.7
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 1.1e-19 101.3 69 72.5
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 4.1e-19 99.4 113 51.3
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 1.2e-15 87.8 107 45.8
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 2.0e-13 80.5 212 30.7
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 5.4e-11 72.4 115 37.4
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 3.5e-10 69.7 120 38.3
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 3.0e-09 66.6 92 48.9


User provided reference genes

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