Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 3.7e-296 1020.8 510 100.0
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 3.8e-216 755.0 455 78.0
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 7.1e-215 750.7 452 77.9
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 4.3e-212 741.5 446 75.1
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.4e-212 740.7 457 76.4
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 3.7e-211 738.4 452 76.5
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 3.7e-211 738.4 452 75.4
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 6.3e-211 737.6 455 76.3
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 3.4e-209 731.9 454 75.6
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 4.5e-209 731.5 460 74.1
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 7.6e-209 730.7 457 74.8
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 7.6e-209 730.7 452 75.0
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.0e-208 730.3 457 75.5
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 3.8e-208 728.4 452 75.0
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 3.8e-208 728.4 452 75.4
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 5.0e-208 728.0 450 75.8
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 5.0e-208 728.0 462 73.8
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 6.5e-208 727.6 452 74.6
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 6.5e-208 727.6 452 73.9
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.1e-207 726.9 453 74.2
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 1.4e-207 726.5 453 74.4
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.9e-207 726.1 452 74.3
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 4.2e-207 724.9 455 73.4
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.2e-206 723.4 447 75.4
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 1.2e-206 723.4 452 73.0
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.1e-206 722.6 452 74.6
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 2.7e-206 722.2 449 75.7
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 2.7e-206 722.2 452 73.5
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 3.6e-206 721.8 453 74.0
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 4.6e-206 721.5 452 74.3
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 6.1e-206 721.1 453 74.6
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 7.9e-206 720.7 452 73.5
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.3e-205 719.9 428 77.6
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 3.9e-205 718.4 457 73.5
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 6.7e-205 717.6 453 74.2
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 8.7e-205 717.2 446 74.0
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.1e-204 716.8 452 73.0
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 1.5e-204 716.5 451 73.6
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 1.9e-204 716.1 453 74.0
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 4.3e-204 714.9 452 73.7
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 4.3e-204 714.9 447 74.0
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 7.4e-204 714.1 461 73.5
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 9.7e-204 713.8 471 71.3
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.3e-203 713.4 453 73.3
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 1.6e-203 713.0 453 74.0
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 2.8e-203 712.2 453 74.2
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 6.3e-203 711.1 452 72.8
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.4e-202 709.9 458 72.9
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 1.8e-202 709.5 463 71.3
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.3e-202 708.0 481 69.6
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 6.9e-202 707.6 452 72.6
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 2.0e-201 706.1 452 72.3
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 3.4e-201 705.3 452 72.3
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 4.5e-201 704.9 452 72.1
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 7.7e-201 704.1 453 72.6
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.0e-200 703.7 462 71.9
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.3e-200 703.4 453 72.8
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.7e-200 703.0 453 72.0
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 1.7e-200 703.0 453 71.7
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 5.0e-200 701.4 452 73.0
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.5e-200 701.0 481 69.0
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 6.5e-200 701.0 453 72.8
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 8.5e-200 700.7 453 72.0
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 1.1e-199 700.3 453 72.4
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.4e-199 699.9 453 71.5
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 3.2e-199 698.7 457 72.6
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 3.2e-199 698.7 453 72.4
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 4.2e-199 698.4 498 67.3
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.5e-199 698.0 446 73.1
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 9.4e-199 697.2 453 72.2
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.6e-198 696.4 453 72.0
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 2.7e-198 695.7 453 72.0
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 2.7e-198 695.7 473 69.8
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 3.6e-198 695.3 453 72.2
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 4.6e-198 694.9 453 71.7
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.0e-197 693.7 453 71.5
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.0e-197 693.7 457 71.1
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.8e-197 693.0 452 72.8
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 3.0e-197 692.2 453 71.5
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 6.7e-197 691.0 453 71.7
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.1e-196 690.3 441 72.6
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.5e-196 689.9 450 69.6
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 1.5e-196 689.9 452 70.6
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 3.3e-196 688.7 452 72.3
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 4.4e-196 688.3 452 72.3
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 6.3e-195 684.5 453 70.9
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 6.3e-195 684.5 452 70.8
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 1.2e-193 680.2 454 68.7
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 1.0e-189 667.2 451 68.7
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 8.2e-187 657.5 447 68.2
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 2.8e-179 632.5 457 67.2
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.2e-177 627.1 411 72.3
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.0e-176 624.0 450 64.2
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.6e-174 616.7 447 65.1
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 9.8e-172 607.4 455 64.6
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.4e-170 603.6 447 64.0
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 3.5e-169 599.0 447 64.7
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 1.5e-167 593.6 475 59.8
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 2.1e-166 589.7 485 59.2
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 2.3e-160 569.7 363 73.3
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 6.4e-155 551.6 366 72.4
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 4.6e-153 545.4 453 59.6
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 8.6e-152 541.2 361 70.4
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 5.1e-136 488.8 290 77.6
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.5e-124 450.7 453 49.4
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.5e-124 450.7 468 52.4
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 5.1e-112 409.1 473 47.4
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 5.6e-111 405.6 258 73.6
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 8.4e-107 391.7 265 70.6
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 4.3e-103 379.4 463 46.0
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 3.4e-76 290.0 451 38.6
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 2.1e-41 174.5 227 41.4
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 6.4e-38 162.9 100 72.0
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 1.9e-34 151.4 97 72.2
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 1.9e-34 151.4 97 72.2
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 1.9e-34 151.4 97 72.2
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 1.9e-34 151.4 97 72.2
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 1.4e-29 135.2 281 35.2
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 1.5e-23 115.2 72 73.6
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 1.1e-16 92.4 56 76.8
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 1.9e-10 71.6 43 79.1
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 2.0e-07 61.6 40 67.5
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.6e-07 59.7 41 68.3


User provided reference genes

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