Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 4.8e-97 357.8 183 100.0
MBI06_g45442_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 3.0e-70 268.9 146 97.3
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 2.8e-20 102.8 195 37.4
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 6.9e-19 98.2 192 37.0
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 1.2e-18 97.4 155 41.9
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 1.0e-17 94.4 169 40.2
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.3e-17 94.0 193 39.9
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 1.7e-17 93.6 152 42.8
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 2.2e-17 93.2 183 38.3
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 2.2e-17 93.2 171 42.1
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 6.5e-17 91.7 172 41.3
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 6.5e-17 91.7 194 34.5
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 6.5e-17 91.7 196 36.2
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 1.4e-16 90.5 151 39.7
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.9e-16 90.1 177 39.5
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 1.9e-16 90.1 196 36.2
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 3.2e-16 89.4 177 39.0
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 4.2e-16 89.0 196 35.2
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 5.5e-16 88.6 197 36.0
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 5.5e-16 88.6 194 33.5
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 7.1e-16 88.2 194 36.6
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 7.9e-15 84.7 203 35.5
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 7.9e-15 84.7 168 38.7
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 1.8e-14 83.6 179 36.9
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 1.8e-14 83.6 190 35.3
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.3e-14 83.2 205 35.6
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.3e-14 83.2 203 35.0
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 2.3e-14 83.2 165 40.0
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 2.3e-14 83.2 167 35.9
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 2.3e-14 83.2 174 34.5
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 3.0e-14 82.8 195 34.9
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 3.9e-14 82.4 178 39.3
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.9e-14 82.4 149 41.6
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 8.7e-14 81.3 185 35.7
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 8.7e-14 81.3 184 36.4
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 1.5e-13 80.5 196 32.7
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.5e-13 80.5 190 32.1
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 1.9e-13 80.1 172 38.4
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 3.3e-13 79.3 164 37.2
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 3.3e-13 79.3 172 34.9
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 3.3e-13 79.3 142 37.3
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 3.3e-13 79.3 195 34.4
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 3.3e-13 79.3 172 37.8
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 4.3e-13 79.0 157 38.2
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 4.3e-13 79.0 175 35.4
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 9.7e-13 77.8 154 39.0
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 9.7e-13 77.8 212 32.5
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 1.3e-12 77.4 178 33.7
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 1.6e-12 77.0 172 36.6
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 2.2e-12 76.6 200 32.0
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 3.7e-12 75.9 169 37.3
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 4.8e-12 75.5 175 34.3
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 8.2e-12 74.7 203 32.0
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 8.2e-12 74.7 164 35.4
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 1.8e-11 73.6 187 32.6
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.4e-11 73.2 169 36.7
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 3.1e-11 72.8 169 36.7
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 3.1e-11 72.8 172 33.7
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 5.3e-11 72.0 141 40.4
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 6.9e-11 71.6 169 37.3
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 9.0e-11 71.2 208 31.2
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 9.0e-11 71.2 211 30.8
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 9.0e-11 71.2 162 35.8
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 1.5e-10 70.5 202 30.7
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 2.0e-10 70.1 192 33.9
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 2.6e-10 69.7 215 31.2
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 4.5e-10 68.9 205 28.8
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 4.5e-10 68.9 201 29.4
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 5.9e-10 68.6 205 28.8
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 5.9e-10 68.6 152 34.9
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 5.9e-10 68.6 149 32.2
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 7.7e-10 68.2 199 31.7
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 7.7e-10 68.2 174 35.1
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.3e-09 67.4 180 30.6
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 1.7e-09 67.0 154 35.7
AL1G34860 Arabidopsis lyrata HOM05D011160 ORTHO05D013203 2.9e-09 66.2 99 41.4
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 2.9e-09 66.2 205 28.3
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 2.9e-09 66.2 205 28.3
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 3.8e-09 65.9 203 29.1
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 6.5e-09 65.1 157 36.3
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 8.5e-09 64.7 209 27.8
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 8.5e-09 64.7 199 31.7
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 8.5e-09 64.7 164 34.8
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 8.5e-09 64.7 138 33.3
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 1.4e-08 63.9 183 31.7
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 1.4e-08 63.9 183 31.7
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 1.9e-08 63.5 139 39.6
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 2.5e-08 63.2 215 29.3
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 3.2e-08 62.8 199 31.2
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 4.2e-08 62.4 189 31.2
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 9.4e-08 61.2 210 29.5
Carub.0001s2113 Capsella rubella HOM05D011160 ORTHO05D013203 2.7e-07 59.7 103 35.9
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 2.7e-07 59.7 203 29.6
AT1G21695 Arabidopsis thaliana HOM05D011160 ORTHO05D013203 4.6e-07 58.9 102 35.3
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 6.1e-07 58.5 204 29.9
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 7.9e-07 58.2 208 31.2
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 7.9e-07 58.2 208 31.2
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 2.3e-06 56.6 125 31.2
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 2.3e-06 56.6 125 31.2
CARHR022050 Cardamine hirsuta HOM05D011160 ORTHO05D013203 3.0e-06 56.2 114 34.2
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 3.9e-06 55.8 156 34.0
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 3.9e-06 55.8 173 31.8
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 6.7e-06 55.1 189 28.6


User provided reference genes

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