Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g32176_MAGBIO Magnolia biondii HOM05D007988 ORTHO05D009824 9.5e-152 540.4 330 100.0
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 1.3e-28 131.3 349 40.4
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 8.6e-28 128.6 349 38.1
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 3.3e-27 126.7 345 39.1
Nn1g08990 Nelumbo nucifera HOM05D007988 ORTHO05D009824 4.3e-27 126.3 349 36.1
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 7.3e-27 125.6 354 37.0
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 7.3e-27 125.6 354 37.0
Nn5g28477 Nelumbo nucifera HOM05D007988 ORTHO05D009824 2.1e-26 124.0 342 40.9
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 2.1e-26 124.0 354 34.2
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 3.6e-26 123.2 355 37.7
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 4.7e-26 122.9 372 39.5
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 8.1e-26 122.1 372 33.9
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 1.4e-25 121.3 352 36.9
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 1.2e-24 118.2 346 39.3
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 1.5e-24 117.9 345 35.9
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 7.5e-24 115.5 349 35.8
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 1.7e-23 114.4 352 39.5
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 2.2e-23 114.0 350 39.7
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 4.9e-23 112.8 347 36.0
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 6.4e-23 112.5 348 32.5
CiPaw.16G021200 Carya illinoinensis HOM05D007988 ORTHO05D009824 1.1e-22 111.7 354 37.9
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 3.2e-22 110.2 355 35.5
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 4.1e-22 109.8 355 35.2
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 2.1e-21 107.5 346 38.4
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 2.7e-21 107.1 340 39.4
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 6.0e-21 105.9 352 38.6
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 2.3e-20 104.0 342 36.0
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 3.0e-20 103.6 332 38.0
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 3.0e-20 103.6 357 30.8
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 3.9e-20 103.2 355 33.8
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 6.6e-20 102.4 348 31.9
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 1.2e-18 98.2 360 35.3
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 2.8e-18 97.1 354 36.2
FAN27G1764 Fragaria x ananassa HOM05D007988 ORTHO05D009824 2.8e-18 97.1 361 36.8
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 3.6e-18 96.7 360 36.1
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 4.7e-18 96.3 365 35.9
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 8.1e-18 95.5 368 34.2
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 1.8e-17 94.4 258 32.9
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 1.8e-17 94.4 349 37.5
arahy.Tifrunner.gnm1.ann1.GX31L7 Arachis hypogaea HOM05D007988 ORTHO05D009824 2.3e-17 94.0 336 35.7
arahy.Tifrunner.gnm1.ann1.1JY9DA Arachis hypogaea HOM05D007988 ORTHO05D009824 3.1e-17 93.6 339 36.0
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 1.2e-16 91.7 367 36.8
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 2.6e-16 90.5 354 35.6
Cpa.g.sc64.159 Carica papaya HOM05D007988 ORTHO05D009824 4.4e-16 89.7 378 34.7
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 7.6e-16 89.0 348 31.6
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 2.9e-15 87.0 358 34.1
Psat0s3071g0240 Pisum sativum HOM05D007988 ORTHO05D009824 6.4e-15 85.9 261 34.1
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 7.1e-14 82.4 189 41.3
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 3.9e-12 76.6 358 31.6
Eucgr.F02525 Eucalyptus grandis HOM05D007988 ORTHO05D009824 8.6e-12 75.5 269 30.9
CANSAT25G2204 Cannabis sativa HOM05D007988 ORTHO05D009824 1.9e-11 74.3 388 28.4
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 7.3e-11 72.4 257 33.1
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 7.3e-11 72.4 345 33.3
HanXRQChr09g0256671 Helianthus annuus HOM05D007988 ORTHO05D009824 1.2e-10 71.6 230 35.2
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 1.6e-10 71.2 365 33.4
THA.LOC104813286 Tarenaya hassleriana HOM05D012069 ORTHO05D009824 1.6e-10 71.2 369 32.5
AUR62007686 Chenopodium quinoa HOM05D007988 ORTHO05D009824 2.8e-10 70.5 258 28.3
Sopen04g026140 Solanum pennellii HOM05D007988 ORTHO05D009824 5.2e-09 66.2 379 31.4
ECA232G2067 Erigeron canadensis HOM05D007988 ORTHO05D009824 6.8e-09 65.9 345 34.8
AL1G34650 Arabidopsis lyrata HOM05D012069 ORTHO05D009824 1.5e-08 64.7 380 29.5
EL10Ac1g01385 Beta vulgaris HOM05D007988 ORTHO05D009824 2.0e-08 64.3 253 28.1
AT1G21510 Arabidopsis thaliana HOM05D012069 ORTHO05D009824 2.6e-08 63.9 364 28.8
Sp1g19040 Schrenkiella parvula HOM05D012069 ORTHO05D009824 9.9e-08 62.0 362 32.0
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 2.2e-07 60.8 46 63.0
Carub.0001s2093 Capsella rubella HOM05D012069 ORTHO05D009824 1.4e-06 58.2 365 30.7
Migut.C01082 Erythranthe guttata HOM05D007988 ORTHO05D009824 5.4e-06 56.2 367 29.2
DCAR_003597 Daucus carota HOM05D007988 ORTHO05D009824 9.3e-06 55.5 253 28.9


User provided reference genes

Program Settings