Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 9.1e-299 1029.6 581 100.0
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.3e-103 381.3 569 44.1
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 6.7e-76 289.3 571 37.8
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 3.3e-59 233.8 584 34.2
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 4.4e-51 206.8 579 32.5
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 7.5e-51 206.1 563 33.0
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 2.2e-50 204.5 623 30.5
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 1.3e-47 195.3 596 31.7
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 6.5e-47 193.0 448 35.7
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 1.3e-42 178.7 629 31.6
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 8.6e-39 166.0 590 30.2
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.4e-36 158.7 294 40.1
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.8e-36 158.3 614 27.5
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 2.3e-36 157.9 608 28.0
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 3.0e-36 157.5 607 28.2
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 1.7e-34 151.8 589 27.7
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 6.3e-34 149.8 628 27.2
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 7.0e-33 146.4 592 29.2
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 2.7e-32 144.4 638 27.1
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.9e-30 138.3 598 27.6
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 3.3e-30 137.5 605 28.3
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 5.6e-30 136.7 596 27.3
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 7.3e-30 136.3 610 28.5
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 2.1e-29 134.8 435 30.8
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.8e-29 134.4 623 26.5
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.0e-28 130.6 617 26.4
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 4.4e-27 127.1 593 25.5
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 2.2e-26 124.8 398 32.4
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.9e-26 124.4 456 30.3
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.1e-25 122.5 561 28.5
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 3.2e-25 120.9 582 27.1
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 3.2e-25 120.9 318 33.3
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 4.1e-25 120.6 609 26.3
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 5.4e-25 120.2 613 26.3
CDE08G0488 Ceratophyllum demersum HOM05D049506 ORTHO05D043857 1.6e-24 118.6 530 27.2
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 7.8e-24 116.3 473 27.9
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.7e-23 115.2 595 27.2
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 2.3e-23 114.8 425 29.2
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 8.6e-23 112.8 478 28.5
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 2.5e-22 111.3 328 32.0
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 3.3e-22 110.9 339 30.7
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 4.3e-22 110.5 611 27.2
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 4.7e-21 107.1 601 25.5
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 4.7e-21 107.1 553 26.9
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 6.2e-21 106.7 599 28.4
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.4e-20 105.5 485 24.9
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.3e-20 104.8 627 24.9
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 3.1e-20 104.4 462 27.3
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 3.1e-20 104.4 462 27.3
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 3.1e-20 104.4 396 28.8
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 5.2e-20 103.6 495 26.3
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 8.9e-20 102.8 454 26.9
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.5e-19 102.1 717 24.5
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 2.0e-19 101.7 498 26.7
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 2.6e-19 101.3 58 87.9
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 9.8e-19 99.4 473 27.5
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 9.8e-19 99.4 297 31.6
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 1.7e-18 98.6 505 26.3
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 3.7e-18 97.4 476 26.3
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 6.4e-18 96.7 538 24.0
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 6.4e-18 96.7 454 28.2
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 1.9e-17 95.1 58 79.3
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 2.4e-17 94.7 504 25.4
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 3.2e-17 94.4 590 25.3
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 2.1e-16 91.7 266 32.3
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 2.1e-16 91.7 501 24.4
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 2.1e-16 91.7 313 30.7
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 2.7e-16 91.3 534 24.2
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 4.6e-16 90.5 597 24.5
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.7e-15 88.6 579 24.7
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 2.3e-15 88.2 455 26.2
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 3.0e-15 87.8 530 25.7
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 5.1e-15 87.0 290 28.6
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 1.1e-14 85.9 189 36.5
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 1.5e-14 85.5 642 23.7
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 5.6e-14 83.6 503 25.4
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.6e-14 83.6 372 26.6
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 7.3e-14 83.2 367 26.2
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 9.5e-14 82.8 59 62.7
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 1.2e-13 82.4 570 26.7
PSO339G5948 Papaver somniferum HOM05D007489 ORTHO05D008037 4.7e-13 80.5 386 24.4
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 6.2e-13 80.1 59 62.7
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 6.2e-13 80.1 576 26.9
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 8.1e-13 79.7 305 28.2
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 1.4e-12 79.0 521 24.2
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 2.3e-12 78.2 64 65.6
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 3.1e-12 77.8 468 26.3
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 2.6e-11 74.7 371 26.4
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 7.6e-11 73.2 426 24.4
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 2.2e-10 71.6 585 22.1
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 6.4e-10 70.1 507 25.8
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.0e-07 62.8 52 55.8
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.3e-07 62.4 52 55.8
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 2.3e-07 61.6 53 62.3
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 3.9e-07 60.8 47 61.7
Eucgr.D00548 Eucalyptus grandis HOM05D007489 ORTHO05D008037 1.1e-06 59.3 34 82.4
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.5e-06 58.9 543 23.4
CBR_g18971 Chara braunii HOM05D007489 ORTHO05D135459 5.6e-06 57.0 59 47.5


User provided reference genes

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