Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.8e-101 372.5 176 100.0
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.7e-35 153.3 106 71.7
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 3.2e-29 132.5 105 62.9
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 2.7e-28 129.4 106 60.4
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 2.3e-27 126.3 132 50.0
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 2.3e-27 126.3 106 56.6
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 5.1e-27 125.2 104 60.6
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 7.3e-26 121.3 111 57.7
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 2.8e-25 119.4 124 54.8
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 3.6e-25 119.0 134 49.3
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 3.6e-25 119.0 106 55.7
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 6.2e-25 118.2 109 55.0
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.4e-24 116.3 105 53.3
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 3.1e-24 115.9 107 53.3
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 3.1e-24 115.9 105 52.4
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 1.2e-23 114.0 128 49.2
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 1.5e-23 113.6 106 52.8
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 2.6e-23 112.8 106 53.8
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 3.4e-23 112.5 106 50.9
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 3.4e-23 112.5 106 51.9
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 3.4e-23 112.5 106 52.8
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 9.9e-23 110.9 128 49.2
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 9.9e-23 110.9 128 48.4
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 1.3e-22 110.5 107 51.4
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 1.7e-22 110.2 103 55.3
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 2.9e-22 109.4 134 48.5
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 3.8e-22 109.0 128 46.9
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 4.9e-22 108.6 105 53.3
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 3.2e-21 105.9 132 46.2
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 7.1e-21 104.8 102 53.9
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 7.1e-21 104.8 148 42.6
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 7.1e-21 104.8 104 51.0
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 1.2e-20 104.0 106 49.1
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.6e-20 103.6 105 52.4
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.1e-20 103.2 148 42.6
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 3.5e-20 102.4 101 53.5
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 4.6e-20 102.1 104 51.9
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 4.6e-20 102.1 88 60.2
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 1.3e-19 100.5 103 52.4
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.7e-19 100.1 148 41.2
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 3.0e-19 99.4 106 47.2
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 5.1e-19 98.6 75 68.0
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 8.7e-19 97.8 87 55.2
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 8.7e-19 97.8 133 45.1
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 1.5e-18 97.1 74 60.8
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.9e-18 96.7 107 48.6
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.9e-18 96.7 80 58.8
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.9e-18 96.7 102 48.0
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.5e-18 96.3 76 59.2
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 2.5e-18 96.3 76 59.2
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 3.3e-18 95.9 106 45.3
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 3.3e-18 95.9 106 44.3
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 5.6e-18 95.1 97 51.5
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 9.6e-18 94.4 106 45.3
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 2.1e-17 93.2 100 51.0
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 2.8e-17 92.8 110 46.4
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 2.8e-17 92.8 106 50.0
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 4.8e-17 92.0 106 44.3
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 6.2e-17 91.7 77 54.5
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 8.1e-17 91.3 119 40.3
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.1e-16 90.9 112 42.9
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 1.8e-16 90.1 103 48.5
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 2.4e-16 89.7 95 52.6
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 2.4e-16 89.7 104 44.2
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 9.0e-16 87.8 91 48.4
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.5e-15 87.0 124 42.7
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 2.0e-15 86.7 105 45.7
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.3e-14 84.0 89 53.9
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.3e-14 84.0 89 53.9
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 7.1e-13 78.2 107 43.9
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 4.6e-12 75.5 95 42.1
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.8e-11 73.6 100 41.0
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.3e-11 73.2 61 55.7
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.1e-10 70.9 87 43.7
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 2.5e-10 69.7 94 45.7
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 3.3e-10 69.3 63 61.9
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 4.3e-10 68.9 83 48.2
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 5.6e-10 68.6 62 58.1
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 7.4e-10 68.2 108 37.0
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 7.4e-10 68.2 95 41.1
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 7.4e-10 68.2 94 43.6
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 7.4e-10 68.2 52 71.2
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 3.7e-09 65.9 134 33.6
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 3.7e-09 65.9 94 43.6
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 1.1e-08 64.3 94 43.6
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 2.4e-08 63.2 94 43.6
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 9.0e-08 61.2 61 55.7
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 6.4e-06 55.1 72 50.0


User provided reference genes

Program Settings