Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g31395_MAGBIO Magnolia biondii HOM05D000157 ORTHO05D000311 1.2e-50 203.0 106 100.0
Dinv19271 Davidia involucrata HOM05D000157 ORTHO05D000311 1.0e-14 83.6 93 57.0
Rhsim04G0073000 Rhododendron simsii HOM05D000157 ORTHO05D000311 3.0e-14 82.0 89 56.2
Dinv02389 Davidia involucrata HOM05D000157 ORTHO05D000311 5.1e-14 81.3 92 53.3
MBI07_g17040_MAGBIO Magnolia biondii HOM05D000157 ORTHO05D000311 5.1e-14 81.3 89 52.8
Ciclev10018257m.g Citrus clementina HOM05D000157 ORTHO05D000311 3.3e-13 78.6 89 53.9
Oeu031087.1 Olea europaea HOM05D000157 ORTHO05D000311 3.6e-12 75.1 90 51.1
Rhsim06G0133800 Rhododendron simsii HOM05D000157 ORTHO05D000311 3.6e-12 75.1 99 46.5
Manes.12G088214 Manihot esculenta HOM05D000157 ORTHO05D000311 6.2e-12 74.3 98 48.0
Thecc.01G242200 Theobroma cacao HOM05D000157 ORTHO05D000311 8.1e-12 73.9 90 51.1
MD09G1240700 Malus domestica HOM05D000157 ORTHO05D000311 1.1e-11 73.6 96 51.0
Nitab4.5_0009958g0010 Nicotiana tabacum HOM05D000157 ORTHO05D000311 1.4e-11 73.2 102 46.1
Nitab4.5_0002645g0020 Nicotiana tabacum HOM05D000157 ORTHO05D000311 1.8e-11 72.8 103 48.5
Actinidia10981 Actinidia chinensis HOM05D000157 ORTHO05D000311 2.3e-11 72.4 108 47.2
Eucgr.K01087 Eucalyptus grandis HOM05D000157 ORTHO05D000311 2.3e-11 72.4 82 52.4
Nn1g09020 Nelumbo nucifera HOM05D000157 ORTHO05D000311 3.1e-11 72.0 88 45.5
Cpa.g.sc209.12 Carica papaya HOM05D000157 ORTHO05D000311 5.2e-11 71.2 92 51.1
Oeu036168.1 Olea europaea HOM05D000157 ORTHO05D000311 5.2e-11 71.2 90 48.9
PGSC0003DMG400009405 Solanum tuberosum HOM05D000157 ORTHO05D000311 1.2e-10 70.1 90 48.9
Atru.chr6.2833 Acer truncatum HOM05D000157 ORTHO05D000311 1.5e-10 69.7 93 50.5
FvH4_6g27024 Fragaria vesca HOM05D000157 ORTHO05D000311 1.5e-10 69.7 81 53.1
FAN05G0713 Fragaria x ananassa HOM05D000157 ORTHO05D000311 1.5e-10 69.7 87 51.7
FAN14G3098 Fragaria x ananassa HOM05D000157 ORTHO05D000311 1.5e-10 69.7 81 53.1
Cfa014698 Carpinus fangiana HOM05D000157 ORTHO05D000311 2.0e-10 69.3 82 50.0
Haze_13320 Corylus avellana HOM05D000157 ORTHO05D000311 2.0e-10 69.3 88 48.9
Oeu036089.1 Olea europaea HOM05D000157 ORTHO05D000311 2.0e-10 69.3 89 49.4
Potri.019G091400 Populus trichocarpa HOM05D000157 ORTHO05D000311 2.0e-10 69.3 90 53.3
PGR042G3200 Punica granatum HOM05D000157 ORTHO05D000311 2.0e-10 69.3 90 47.8
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 2.6e-10 68.9 93 47.3
CANSAT64G1154 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-10 68.9 86 50.0
Cc05_g08050 Coffea canephora HOM05D000157 ORTHO05D000311 2.6e-10 68.9 80 51.2
FAN09G1581 Fragaria x ananassa HOM05D000157 ORTHO05D000311 2.6e-10 68.9 88 52.3
Nitab4.5_0009096g0010 Nicotiana tabacum HOM05D000157 ORTHO05D000311 3.4e-10 68.6 83 50.6
PGR142G2111 Punica granatum HOM05D000157 ORTHO05D000311 3.4e-10 68.6 92 50.0
QL08p041149 Quercus lobata HOM05D000157 ORTHO05D000311 4.4e-10 68.2 72 54.2
FAN02G3521 Fragaria x ananassa HOM05D000157 ORTHO05D000311 5.8e-10 67.8 81 51.9
Actinidia39338 Actinidia chinensis HOM05D000157 ORTHO05D000311 1.3e-09 66.6 88 46.6
Migut.H02159 Erythranthe guttata HOM05D000157 ORTHO05D000311 3.8e-09 65.1 94 45.7
Nitab4.5_0002629g0120 Nicotiana tabacum HOM05D000157 ORTHO05D000311 3.8e-09 65.1 89 47.2
ClCG09G011300 Citrullus lanatus HOM05D000157 ORTHO05D000311 4.9e-09 64.7 89 46.1
Duzib235G1287 Durio zibethinus HOM05D000086 ORTHO05D000311 4.9e-09 64.7 80 50.0
Lsat_1_v5_gn_8_137820 Lactuca sativa HOM05D000157 ORTHO05D000311 4.9e-09 64.7 89 41.6
Oeu000567.1 Olea europaea HOM05D000157 ORTHO05D000311 4.9e-09 64.7 97 47.4
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 4.9e-09 64.7 81 46.9
TAR627G1031 Trochodendron aralioides HOM05D000157 ORTHO05D000311 4.9e-09 64.7 81 49.4
DCAR_009767 Daucus carota HOM05D000157 ORTHO05D000311 6.4e-09 64.3 87 49.4
RcHm_v2.0_Chr2g0128891 Rosa chinensis HOM05D000157 ORTHO05D000311 6.4e-09 64.3 95 46.3
Sed0025068 Sechium edule HOM05D000157 ORTHO05D000311 1.1e-08 63.5 85 45.9
VMungo1080G0543 Vigna mungo HOM05D000157 ORTHO05D000311 1.1e-08 63.5 85 41.2
Sabra19G0104700 Salix brachista HOM05D000157 ORTHO05D000311 1.4e-08 63.2 76 53.9
HanXRQChr17g0555011 Helianthus annuus HOM05D000157 ORTHO05D000311 1.9e-08 62.8 91 42.9
Prupe.3G125000 Prunus persica HOM05D000157 ORTHO05D000311 2.4e-08 62.4 90 48.9
Aqoxy1G02195 Aquilegia oxysepala HOM05D000157 ORTHO05D000311 3.2e-08 62.0 90 44.4
TWI14G1054 Tripterygium wilfordii HOM05D000157 ORTHO05D000311 4.1e-08 61.6 88 45.5
Gohir.A10G030100 Gossypium hirsutum HOM05D000086 ORTHO05D000311 5.4e-08 61.2 93 45.2
CSS0039028 Camellia sinensis var. sinensis HOM05D000157 ORTHO05D000311 7.1e-08 60.8 79 46.8
Gohir.D10G030700 Gossypium hirsutum HOM05D000086 ORTHO05D000311 7.1e-08 60.8 94 44.7
HanXRQChr13g0392311 Helianthus annuus HOM05D000157 ORTHO05D000311 7.1e-08 60.8 92 38.0
CsaV3_6G037650 Cucumis sativus L. HOM05D000157 ORTHO05D000311 9.2e-08 60.5 88 43.2
Phvul.005G097500 Phaseolus vulgaris HOM05D000157 ORTHO05D000311 1.2e-07 60.1 87 40.2
Nn1g04332 Nelumbo nucifera HOM05D000157 ORTHO05D000311 2.1e-07 59.3 88 46.6
MELO3C014427.2 Cucumis melo HOM05D000157 ORTHO05D000311 3.5e-07 58.5 88 42.0
Lalb_Chr14g0367301 Lupinus albus HOM05D000086 ORTHO05D000311 4.6e-07 58.2 77 49.4
TPR.G6413 Trifolium pratense HOM05D000157 ORTHO05D000311 4.6e-07 58.2 100 42.0
Glyma.12G121400 Glycine max HOM05D000157 ORTHO05D000311 6.0e-07 57.8 104 39.4
Gorai.011G032600 Gossypium raimondii HOM05D000086 ORTHO05D000311 6.0e-07 57.8 94 43.6
PSO675G0136 Papaver somniferum HOM05D000157 ORTHO05D000311 6.0e-07 57.8 104 39.4
Sopen07g027380 Solanum pennellii HOM05D000157 ORTHO05D000311 6.0e-07 57.8 67 52.2
Ca_01471_v3 Cicer arietinum L. HOM05D000157 ORTHO05D000311 7.8e-07 57.4 78 46.2
Lj3g0010868 Lotus japonicus HOM05D000157 ORTHO05D000311 1.0e-06 57.0 82 43.9
Medtr2g090950 Medicago truncatula HOM05D000157 ORTHO05D000311 1.7e-06 56.2 93 43.0
TAR629G2314 Trochodendron aralioides HOM05D000157 ORTHO05D000311 1.7e-06 56.2 103 39.8
TWI63G0800 Tripterygium wilfordii HOM05D000157 ORTHO05D000311 2.3e-06 55.8 96 38.5
CARHR137410 Cardamine hirsuta HOM05D000157 ORTHO05D000311 6.6e-06 54.3 84 47.6
CDE02G1728 Ceratophyllum demersum HOM05D000157 ORTHO05D000311 6.6e-06 54.3 75 44.0
Glyma.06G284600 Glycine max HOM05D000157 ORTHO05D000311 8.6e-06 53.9 97 36.1
Potri.011G063100 Populus trichocarpa HOM05D000157 ORTHO05D000311 8.6e-06 53.9 91 41.8
THA.LOC104822881 Tarenaya hassleriana HOM05D000157 ORTHO05D000311 8.6e-06 53.9 81 46.9


User provided reference genes

Program Settings