Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 7.4e-181 637.1 327 100.0
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 1.1e-128 463.8 329 73.6
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 1.1e-123 447.2 326 73.3
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 5.9e-122 441.4 327 70.9
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 7.8e-122 441.0 318 73.6
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.5e-120 436.0 295 74.6
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 3.3e-120 435.6 327 70.0
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 3.4e-117 425.6 295 73.2
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 5.8e-117 424.9 327 67.6
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.3e-116 423.7 327 68.5
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.1e-115 420.6 331 67.7
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.4e-115 420.2 328 68.6
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 1.9e-115 419.9 329 68.1
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 3.2e-115 419.1 312 68.9
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 5.4e-115 418.3 329 67.8
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 5.4e-115 418.3 295 71.9
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.6e-114 416.8 294 70.7
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 2.0e-114 416.4 299 69.9
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 2.7e-114 416.0 296 71.3
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 2.7e-114 416.0 295 71.5
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 3.5e-114 415.6 327 66.7
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 4.6e-114 415.2 315 67.6
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 6.0e-114 414.8 305 68.5
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 6.0e-114 414.8 295 70.5
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.0e-113 414.1 315 67.9
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 1.7e-113 413.3 328 67.1
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 1.5e-112 410.2 288 70.5
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.9e-112 409.8 288 70.5
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.9e-112 409.8 327 66.1
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 2.5e-112 409.5 294 71.8
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 3.3e-112 409.1 290 72.4
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 3.3e-112 409.1 292 70.5
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 4.3e-112 408.7 254 79.9
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 4.3e-112 408.7 302 68.2
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 5.6e-112 408.3 290 72.4
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 5.6e-112 408.3 292 69.5
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 5.6e-112 408.3 328 64.6
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 1.6e-111 406.8 254 79.5
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 1.6e-111 406.8 269 73.6
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 2.1e-111 406.4 288 69.8
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 2.1e-111 406.4 295 70.8
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.8e-111 406.0 327 65.7
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 3.6e-111 405.6 320 69.4
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.1e-110 404.1 327 64.2
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 1.8e-110 403.3 269 73.2
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.3e-110 402.9 269 73.6
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 2.3e-110 402.9 293 68.3
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 2.3e-110 402.9 269 73.2
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 3.1e-110 402.5 301 69.1
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.0e-110 402.1 295 69.5
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 5.2e-110 401.7 325 64.3
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 5.2e-110 401.7 272 73.2
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 6.8e-110 401.4 309 67.6
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 6.8e-110 401.4 292 68.8
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 6.8e-110 401.4 271 73.1
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 6.8e-110 401.4 284 71.5
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 1.2e-109 400.6 329 62.6
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 1.5e-109 400.2 272 71.7
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 2.6e-109 399.4 325 63.7
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 2.6e-109 399.4 269 75.1
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 2.6e-109 399.4 271 72.7
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 4.4e-109 398.7 308 65.9
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 4.4e-109 398.7 327 64.5
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 5.8e-109 398.3 269 72.1
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 7.5e-109 397.9 292 69.2
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 7.5e-109 397.9 271 72.3
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 9.8e-109 397.5 303 66.0
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 2.9e-108 396.0 286 69.6
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.1e-107 394.0 327 63.0
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 1.6e-106 390.2 314 63.7
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.6e-106 390.2 296 66.9
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 2.1e-106 389.8 335 63.0
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 7.8e-106 387.9 277 70.8
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.0e-105 387.5 330 61.2
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 6.6e-105 384.8 275 70.9
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 8.6e-105 384.4 273 70.7
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 9.5e-104 380.9 271 69.4
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 3.6e-103 379.0 286 67.1
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 3.6e-103 379.0 279 69.9
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 6.2e-103 378.3 327 63.6
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.5e-101 373.6 234 79.5
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 3.4e-101 372.5 237 78.5
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 6.4e-100 368.2 260 69.6
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 8.3e-100 367.9 236 75.4
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 1.9e-99 366.7 291 63.6
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.3e-97 360.5 284 64.1
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 5.1e-97 358.6 259 68.7
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.5e-96 356.3 237 74.7
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 5.2e-94 348.6 263 69.6
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 5.8e-93 345.1 212 79.2
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.2e-91 339.3 212 77.4
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.6e-90 337.0 251 68.1
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 2.3e-89 333.2 290 59.0
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.1e-88 330.9 263 63.9
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 1.5e-85 320.5 273 61.9
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 9.9e-85 317.8 274 62.4
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 7.1e-83 311.6 284 58.5
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.0e-81 306.2 367 48.2
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 2.1e-79 300.1 281 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 1.5e-77 293.9 281 54.4
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 1.9e-72 276.9 294 53.1
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.0e-68 264.6 243 55.6
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 2.3e-65 253.4 148 83.1
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 8.7e-65 251.5 252 57.1
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 9.6e-64 248.1 276 47.5
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 9.6e-64 248.1 224 58.9
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 1.1e-51 208.0 268 42.5
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.5e-45 186.0 129 71.3
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 3.1e-38 163.3 105 75.2
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.1e-34 150.6 88 84.1
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 6.1e-34 149.1 88 84.1
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.1e-30 136.7 81 82.7
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.4e-22 111.3 76 71.1
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.8e-20 103.2 64 75.0
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.2e-19 99.0 63 74.6
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 2.3e-17 94.0 261 29.9
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 4.0e-09 66.6 36 83.3
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 8.9e-09 65.5 35 82.9
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 7.5e-08 62.4 157 36.9


User provided reference genes

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