Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 1.2e-166 589.7 297 100.0
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 4.2e-90 335.5 266 67.3
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 9.9e-84 314.3 219 68.9
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.7e-83 313.5 282 61.3
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.4e-82 310.5 220 67.7
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.9e-82 310.1 218 67.9
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 2.5e-82 309.7 284 58.8
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.2e-82 309.3 220 70.0
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 3.2e-82 309.3 212 69.3
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 3.2e-82 309.3 215 70.7
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 4.2e-82 308.9 223 68.2
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 5.5e-82 308.5 216 69.0
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 7.1e-82 308.1 216 69.9
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.6e-81 307.0 217 67.7
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.1e-81 306.6 217 67.7
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 4.6e-81 305.4 218 67.0
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 1.0e-80 304.3 217 67.3
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 5.1e-80 302.0 284 59.9
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 6.7e-80 301.6 216 67.6
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 1.9e-79 300.1 216 67.6
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 2.5e-79 299.7 220 68.2
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 3.3e-79 299.3 220 66.8
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 4.3e-79 298.9 220 68.2
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 4.3e-79 298.9 232 62.5
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 1.6e-78 297.0 282 57.1
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.6e-78 297.0 239 61.5
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 2.1e-78 296.6 218 67.9
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 2.1e-78 296.6 207 67.6
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 3.7e-78 295.8 218 65.1
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 4.8e-78 295.4 269 55.4
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 4.8e-78 295.4 214 66.8
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 8.2e-78 294.7 211 67.8
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.4e-77 293.9 225 61.8
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 1.8e-77 293.5 211 67.3
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.4e-77 293.1 221 68.3
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 3.1e-77 292.7 215 65.1
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.1e-77 292.7 215 65.1
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 4.0e-77 292.4 220 65.5
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.0e-77 292.4 221 68.3
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.9e-77 291.6 215 65.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.9e-77 291.6 213 65.7
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 1.2e-76 290.8 219 63.5
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.2e-76 290.8 223 64.1
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.0e-76 290.0 217 64.1
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.0e-76 290.0 215 64.7
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.0e-76 290.0 236 61.4
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 2.6e-76 289.7 216 64.8
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.4e-76 289.3 236 61.0
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 4.5e-76 288.9 217 65.0
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 5.8e-76 288.5 218 64.7
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 7.6e-76 288.1 216 63.0
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.0e-75 287.7 253 56.5
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.3e-75 287.3 222 61.3
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.3e-75 287.3 213 68.5
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.3e-75 287.3 225 62.2
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 1.7e-75 287.0 219 65.8
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 2.9e-75 286.2 219 63.9
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 3.8e-75 285.8 227 59.9
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 3.8e-75 285.8 240 60.0
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 3.8e-75 285.8 240 60.0
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 4.9e-75 285.4 240 59.6
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 8.4e-75 284.6 229 60.7
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 8.4e-75 284.6 303 52.5
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.1e-74 284.3 255 58.0
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.1e-74 284.3 210 64.8
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 2.5e-74 283.1 306 52.6
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 3.2e-74 282.7 240 60.4
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 3.2e-74 282.7 250 57.6
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 4.2e-74 282.3 211 65.4
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 5.5e-74 282.0 233 60.9
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.2e-73 280.8 216 61.1
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.6e-73 280.4 241 60.6
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.6e-73 280.4 194 70.1
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 1.6e-73 280.4 217 64.1
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.7e-73 279.6 231 60.6
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 2.7e-73 279.6 207 64.3
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 3.5e-73 279.3 283 54.8
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 4.6e-73 278.9 211 64.5
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 6.0e-73 278.5 245 58.8
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.3e-72 276.6 305 52.5
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.3e-72 276.6 305 52.5
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 3.9e-72 275.8 222 61.7
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 6.7e-72 275.0 209 64.6
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 6.7e-72 275.0 231 59.3
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 8.7e-72 274.6 296 51.0
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.1e-71 274.2 223 60.5
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.9e-71 273.5 231 59.3
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 5.7e-71 271.9 213 62.4
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 7.4e-71 271.6 225 58.7
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 9.7e-71 271.2 250 56.0
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 3.7e-70 269.2 238 55.0
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 6.3e-70 268.5 225 57.8
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.6e-68 263.1 222 58.6
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 1.3e-67 260.8 290 50.3
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.9e-67 259.6 217 59.4
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 1.4e-66 257.3 280 50.0
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 6.1e-65 251.9 239 54.4
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.4e-61 240.7 209 56.5
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 3.1e-61 239.6 218 56.0
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 5.0e-59 232.3 259 52.9
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.1e-57 226.9 162 66.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 3.8e-51 206.1 192 54.7
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 2.1e-49 200.3 217 50.7
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.7e-49 199.1 158 64.6
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 8.0e-49 198.4 217 48.8
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 8.8e-48 194.9 213 46.9
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 8.2e-46 188.3 239 40.2
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 1.3e-43 181.0 141 63.8
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 2.2e-43 180.3 225 43.1
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 5.2e-40 169.1 126 67.5
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 3.4e-39 166.4 162 54.3
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.7e-35 154.1 175 48.6
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.8e-35 152.9 121 60.3
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.1e-34 151.4 98 73.5
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 2.1e-33 147.1 126 61.9
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.7e-33 146.0 103 68.0
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 8.0e-33 145.2 135 51.9
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 2.6e-31 140.2 125 56.0
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 4.4e-31 139.4 96 65.6
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 8.3e-30 135.2 123 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 3.6e-25 119.8 176 39.2
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 1.5e-23 114.4 92 58.7
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.0e-17 92.0 64 67.2
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 2.9e-14 83.6 76 53.9
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.5e-10 70.5 75 52.0


User provided reference genes

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