Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 3.5e-186 654.8 333 100.0
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 9.2e-155 550.4 312 88.1
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 8.7e-153 543.9 325 85.8
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 6.6e-145 517.7 316 83.5
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 3.3e-144 515.4 312 82.7
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.8e-143 512.3 312 82.4
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.8e-142 509.6 331 78.5
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.6e-138 496.5 312 79.2
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 2.1e-138 496.1 326 77.6
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 4.6e-138 495.0 314 76.8
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 2.5e-136 489.2 315 77.5
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 2.8e-135 485.7 314 79.9
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 1.8e-134 483.0 315 77.5
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 5.8e-133 478.0 313 76.0
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 4.9e-132 474.9 306 77.8
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.1e-131 473.8 313 75.7
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 1.9e-131 473.0 317 74.8
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 6.0e-130 468.0 323 75.9
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 7.9e-130 467.6 313 73.8
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 4.8e-127 458.4 311 77.2
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.2e-125 453.8 321 72.9
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 6.5e-124 448.0 311 70.7
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.4e-123 446.8 317 74.4
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 2.5e-123 446.0 312 72.4
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 9.3e-123 444.1 314 72.3
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 1.2e-122 443.7 314 73.6
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.1e-122 443.0 293 77.5
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 3.5e-122 442.2 315 71.7
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.3e-121 440.3 313 72.2
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 3.9e-121 438.7 314 72.6
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 2.5e-120 436.0 328 68.3
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 3.3e-120 435.6 328 68.0
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 4.3e-120 435.3 328 68.3
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 5.7e-120 434.9 325 68.3
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 6.3e-119 431.4 336 68.2
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.4e-118 430.3 326 69.3
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 1.8e-118 429.9 312 71.5
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 1.8e-118 429.9 324 71.3
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 3.1e-118 429.1 314 70.4
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 5.3e-118 428.3 316 69.3
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 1.5e-117 426.8 314 70.1
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 5.9e-117 424.9 314 68.2
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 3.8e-116 422.2 326 67.5
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 6.5e-116 421.4 314 68.8
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 1.6e-114 416.8 330 67.9
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 2.7e-114 416.0 310 70.6
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 4.6e-114 415.2 315 69.8
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 1.0e-113 414.1 314 70.4
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 1.4e-113 413.7 330 65.5
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 2.5e-112 409.5 315 67.0
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 4.3e-112 408.7 251 81.3
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 4.3e-112 408.7 251 81.3
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 5.7e-112 408.3 331 64.0
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 2.8e-111 406.0 313 66.8
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 1.4e-110 403.7 323 64.7
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 2.4e-110 402.9 314 66.9
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 4.5e-109 398.7 314 65.0
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 2.9e-108 396.0 315 64.4
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 8.5e-108 394.4 323 65.3
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 8.5e-108 394.4 328 63.1
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 1.4e-107 393.7 323 63.5
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 1.4e-107 393.7 317 66.2
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 1.4e-107 393.7 323 67.2
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 3.2e-107 392.5 324 63.3
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 5.5e-107 391.7 323 63.2
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 9.4e-107 391.0 316 63.3
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 2.7e-106 389.4 315 64.1
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 4.7e-106 388.7 312 64.7
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 7.9e-106 387.9 324 62.0
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 7.9e-106 387.9 314 64.3
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.4e-105 387.1 314 65.3
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 2.3e-105 386.3 311 65.3
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 1.5e-104 383.6 315 64.4
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.5e-104 383.6 313 65.5
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 2.6e-104 382.9 270 70.0
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 9.7e-104 380.9 342 61.4
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 9.7e-104 380.9 342 61.4
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 6.3e-103 378.3 357 58.0
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 6.3e-103 378.3 312 63.8
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 8.2e-103 377.9 353 59.5
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.1e-102 377.5 343 60.9
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.1e-102 375.9 342 60.5
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 1.9e-99 366.7 317 62.1
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.2e-99 365.9 336 59.5
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 4.7e-98 362.1 372 55.9
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 1.1e-96 357.5 247 72.5
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 9.1e-94 347.8 281 63.0
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 2.2e-92 343.2 328 55.5
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 8.5e-92 341.3 277 66.1
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 9.4e-91 337.8 241 72.6
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 2.0e-88 330.1 323 55.7
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 5.7e-88 328.6 254 65.4
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 7.7e-85 318.2 343 51.3
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 3.8e-84 315.8 378 48.7
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.9e-83 313.5 331 50.2
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 1.8e-81 307.0 247 61.5
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.6e-80 303.1 271 58.7
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 4.4e-80 302.4 319 54.9
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 1.3e-79 300.8 316 50.6
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.5e-64 250.8 155 80.6
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 7.5e-64 248.4 218 61.5
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 4.1e-62 242.7 207 56.5
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 9.8e-56 221.5 207 51.2
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 9.2e-46 188.3 157 63.7
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.7e-42 176.0 185 50.8
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 7.1e-38 162.2 246 43.1
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 9.0e-17 92.0 103 51.5
Ciclev10006333m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.2e-13 81.6 67 67.2
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 2.8e-10 70.5 42 71.4
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.2e-08 65.1 40 80.0
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 4.5e-08 63.2 41 70.7
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 7.2e-06 55.8 39 64.1


User provided reference genes

Program Settings