Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g08594_MAGBIO Magnolia biondii HOM05D038649 ORTHO05D006253 5.3e-259 897.1 435 100.0
MBI06_g08596_MAGBIO Magnolia biondii HOM05D038649 ORTHO05D241610 4.0e-33 146.7 193 45.1
MBI16_g15538_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.2e-24 118.6 214 35.0
MBI16_g15539_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 8.4e-23 112.5 321 26.8
MBI16_g13364_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.3e-20 105.1 217 30.9
MBI16_g04072_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.7e-13 80.9 166 33.7
AUR62034161 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.5e-11 75.1 140 32.1
AUR62014277 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.3e-10 72.0 105 35.2
MBI06_g08595_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.1e-10 71.2 73 56.2
TPR.G11693 Trifolium pratense HOM05D005280 ORTHO05D006253 1.8e-09 68.2 105 38.1
SHI28515 Sapria himalayana HOM05D005280 ORTHO05D006253 2.4e-09 67.8 78 39.7
HanXRQChr05g0139841 Helianthus annuus HOM05D005280 ORTHO05D006253 5.3e-09 66.6 83 39.8
MD05G1300300 Malus domestica HOM05D005280 ORTHO05D006253 5.3e-09 66.6 76 43.4
MD10G1279400 Malus domestica HOM05D005280 ORTHO05D006253 5.3e-09 66.6 76 43.4
TWI38G0304 Tripterygium wilfordii HOM05D005280 ORTHO05D006253 5.3e-09 66.6 76 42.1
MBI06_g08599_MAGBIO Magnolia biondii HOM05D038649 ORTHO05D244432 1.2e-08 65.5 81 49.4
ECA236G4327 Erigeron canadensis HOM05D005280 ORTHO05D006253 1.5e-08 65.1 76 42.1
FAN16G3700 Fragaria x ananassa HOM05D005280 ORTHO05D006253 1.5e-08 65.1 71 43.7
Duzib160G0285 Durio zibethinus HOM05D005280 ORTHO05D006253 2.0e-08 64.7 71 45.1
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.0e-08 64.7 76 40.8
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.0e-08 64.7 76 40.8
Manes.17G056200 Manihot esculenta HOM05D005280 ORTHO05D006253 3.4e-08 63.9 76 40.8
Potri.011G066600 Populus trichocarpa HOM05D005280 ORTHO05D006253 3.4e-08 63.9 76 40.8
CAN.G206.30 Capsicum annuum HOM05D005280 ORTHO05D006253 4.5e-08 63.5 78 38.5
Solyc03g062940.3 Solanum lycopersicum HOM05D005280 ORTHO05D006253 4.5e-08 63.5 78 38.5
Sopen03g015240 Solanum pennellii HOM05D005280 ORTHO05D006253 4.5e-08 63.5 78 38.5
PGSC0003DMG400008719 Solanum tuberosum HOM05D005280 ORTHO05D006253 4.5e-08 63.5 78 38.5
PGSC0003DMG400009000 Solanum tuberosum HOM05D005280 ORTHO05D006253 4.5e-08 63.5 78 38.5
Lj6g0027668 Lotus japonicus HOM05D005280 ORTHO05D006253 5.9e-08 63.2 76 40.8
Peaxi162Scf00871g00047 Petunia axillaris HOM05D005280 ORTHO05D006253 5.9e-08 63.2 78 38.5
Lalb_Chr20g0117481 Lupinus albus HOM05D005280 ORTHO05D006253 7.6e-08 62.8 76 40.8
Prupe.4G062000 Prunus persica HOM05D005280 ORTHO05D006253 7.6e-08 62.8 65 44.6
PGR042G3394 Punica granatum HOM05D005280 ORTHO05D006253 1.0e-07 62.4 73 42.5
Ah.01g013480 Amaranthus hybridus HOM05D005280 ORTHO05D006253 1.3e-07 62.0 76 39.5
QL05p047377 Quercus lobata HOM05D005280 ORTHO05D006253 1.7e-07 61.6 76 40.8
SEGI_31924 Sequoiadendron giganteum HOM05D005280 ORTHO05D006253 2.2e-07 61.2 76 40.8
Sc05g0007070 Simmondsia chinensis HOM05D005280 ORTHO05D006253 2.9e-07 60.8 76 39.5
AT1G29260 Arabidopsis thaliana HOM05D005280 ORTHO05D006253 1.1e-06 58.9 71 45.1
AUR62015144 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.1e-06 58.9 76 38.2
AUR62017603 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.4e-06 58.5 76 38.2
Sabra11G0048200 Salix brachista HOM05D005280 ORTHO05D006253 2.5e-06 57.8 76 36.8


User provided reference genes

Program Settings