Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g08526_MAGBIO Magnolia biondii HOM05D002452 ORTHO05D006585 2.0e-88 328.9 156 100.0
Nn3g21012 Nelumbo nucifera HOM05D002452 ORTHO05D006585 2.2e-29 132.9 67 91.0
Nn3g21014 Nelumbo nucifera HOM05D002452 ORTHO05D006585 2.2e-29 132.9 67 91.0
Actinidia12600 Actinidia chinensis HOM05D002452 ORTHO05D006585 6.3e-29 131.3 67 89.6
Actinidia37023 Actinidia chinensis HOM05D002452 ORTHO05D006585 6.3e-29 131.3 67 89.6
Glyma.15G209000 Glycine max HOM05D002452 ORTHO05D006585 8.2e-29 131.0 67 88.1
VMungo1127G1496 Vigna mungo HOM05D002452 ORTHO05D006585 8.2e-29 131.0 67 88.1
arahy.Tifrunner.gnm1.ann1.4IG6PJ Arachis hypogaea HOM05D002452 ORTHO05D006585 1.1e-28 130.6 67 88.1
HanXRQChr13g0389701 Helianthus annuus HOM05D002452 ORTHO05D006585 1.1e-28 130.6 67 88.1
CAN.G375.47 Capsicum annuum HOM05D002452 ORTHO05D006585 1.4e-28 130.2 67 89.6
Dinv13366 Davidia involucrata HOM05D002452 ORTHO05D006585 1.4e-28 130.2 67 88.1
TAR627G0906 Trochodendron aralioides HOM05D002452 ORTHO05D006585 1.4e-28 130.2 67 89.6
Ciclev10021899m.g Citrus clementina HOM05D002452 ORTHO05D006585 2.4e-28 129.4 67 86.6
DCAR_019610 Daucus carota HOM05D002452 ORTHO05D006585 2.4e-28 129.4 67 89.6
DCAR_019612 Daucus carota HOM05D002452 ORTHO05D006585 2.4e-28 129.4 67 89.6
Phvul.011G168200 Phaseolus vulgaris HOM05D002452 ORTHO05D006585 2.4e-28 129.4 67 86.6
GSVIVG01014101001 Vitis vinifera HOM05D002452 ORTHO05D006585 2.4e-28 129.4 67 89.6
Migut.H02022 Erythranthe guttata HOM05D002452 ORTHO05D006585 3.1e-28 129.0 67 86.6
Lj1A825T64 Lonicera japonica HOM05D002452 ORTHO05D006585 3.1e-28 129.0 67 88.1
Sed0027576 Sechium edule HOM05D002452 ORTHO05D006585 3.1e-28 129.0 67 88.1
arahy.Tifrunner.gnm1.ann1.EQXZ2A Arachis hypogaea HOM05D002452 ORTHO05D006585 4.1e-28 128.6 65 89.2
Aqoxy1G01922 Aquilegia oxysepala HOM05D002452 ORTHO05D006585 5.3e-28 128.3 67 86.6
Gohir.D01G038800 Gossypium hirsutum HOM05D002452 ORTHO05D006585 5.3e-28 128.3 67 86.6
Gorai.002G048000 Gossypium raimondii HOM05D002452 ORTHO05D006585 5.3e-28 128.3 67 86.6
Potri.001G384600 Populus trichocarpa HOM05D002452 ORTHO05D006585 5.3e-28 128.3 67 89.6
PGR083G1274 Punica granatum HOM05D002452 ORTHO05D006585 5.3e-28 128.3 67 88.1
Sabra16G0253200 Salix brachista HOM05D002452 ORTHO05D006585 5.3e-28 128.3 67 89.6
HanXRQChr14g0429531 Helianthus annuus HOM05D002452 ORTHO05D006585 6.9e-28 127.9 67 86.6
Potri.011G106100 Populus trichocarpa HOM05D002452 ORTHO05D006585 6.9e-28 127.9 67 88.1
RcHm_v2.0_Chr5g0029571 Rosa chinensis HOM05D002452 ORTHO05D006585 6.9e-28 127.9 67 89.6
ATR0800G053 Amborella trichopoda HOM05D002452 ORTHO05D006585 9.1e-28 127.5 67 86.6
FAN21G2329 Fragaria x ananassa HOM05D002452 ORTHO05D006585 9.1e-28 127.5 103 64.1
Lalb_Chr01g0006901 Lupinus albus HOM05D002452 ORTHO05D006585 9.1e-28 127.5 67 85.1
CDE10G1050 Ceratophyllum demersum HOM05D002452 ORTHO05D006585 1.2e-27 127.1 67 86.6
Gohir.A01G048100 Gossypium hirsutum HOM05D002452 ORTHO05D006585 1.2e-27 127.1 67 85.1
Hma1.2p1_0050F.1_g028830 Hydrangea macrophylla HOM05D002452 ORTHO05D006585 1.2e-27 127.1 67 86.6
Lj3g0015531 Lotus japonicus HOM05D002452 ORTHO05D006585 1.2e-27 127.1 67 86.6
Manes.15G097600 Manihot esculenta HOM05D002452 ORTHO05D006585 1.2e-27 127.1 67 86.6
Peaxi162Scf00111g01331 Petunia axillaris HOM05D002452 ORTHO05D006585 1.2e-27 127.1 67 88.1
QL08p024701 Quercus lobata HOM05D002452 ORTHO05D006585 1.2e-27 127.1 67 86.6
FAN16G1979 Fragaria x ananassa HOM05D002452 ORTHO05D006585 1.5e-27 126.7 67 88.1
FAN25G2808 Fragaria x ananassa HOM05D002452 ORTHO05D006585 1.5e-27 126.7 67 88.1
Solyc07g062190.4 Solanum lycopersicum HOM05D002452 ORTHO05D006585 1.5e-27 126.7 67 86.6
Sopen07g030470 Solanum pennellii HOM05D002452 ORTHO05D006585 1.5e-27 126.7 67 86.6
PGSC0003DMG400007062 Solanum tuberosum HOM05D002452 ORTHO05D006585 1.5e-27 126.7 67 86.6
TWI38G1964 Tripterygium wilfordii HOM05D002452 ORTHO05D006585 1.5e-27 126.7 67 88.1
CAN.G443.1 Capsicum annuum HOM05D002452 ORTHO05D006585 2.0e-27 126.3 67 86.6
PSO170G5902 Papaver somniferum HOM05D002452 ORTHO05D006585 2.0e-27 126.3 67 85.1
PSO528G0086 Papaver somniferum HOM05D002452 ORTHO05D006585 2.0e-27 126.3 67 85.1
Peaxi162Scf00000g07410 Petunia axillaris HOM05D002452 ORTHO05D006585 2.0e-27 126.3 67 86.6
Peaxi162Scf00013g00028 Petunia axillaris HOM05D002452 ORTHO05D006585 2.0e-27 126.3 67 86.6
HPP92_005570 Vanilla planifolia HOM05D002452 ORTHO05D006585 2.0e-27 126.3 67 85.1
CSS0019439 Camellia sinensis var. sinensis HOM05D002452 ORTHO05D006585 2.6e-27 125.9 67 86.6
CDE10G1087 Ceratophyllum demersum HOM05D002452 ORTHO05D006585 2.6e-27 125.9 67 86.6
ClCG11G017210 Citrullus lanatus HOM05D002452 ORTHO05D006585 2.6e-27 125.9 67 86.6
ECA240G3886 Erigeron canadensis HOM05D002452 ORTHO05D006585 2.6e-27 125.9 67 82.1
FvH4_3g17780 Fragaria vesca HOM05D002452 ORTHO05D006585 2.6e-27 125.9 65 90.8
FAN11G3657 Fragaria x ananassa HOM05D002452 ORTHO05D006585 2.6e-27 125.9 67 88.1
HanXRQChr03g0060471 Helianthus annuus HOM05D002452 ORTHO05D006585 2.6e-27 125.9 69 82.6
Prupe.4G156900 Prunus persica HOM05D002452 ORTHO05D006585 2.6e-27 125.9 67 86.6
Cpa.g.sc77.57 Carica papaya HOM05D002452 ORTHO05D006585 3.4e-27 125.6 67 85.1
Lsat_1_v5_gn_9_100460 Lactuca sativa HOM05D002452 ORTHO05D006585 3.4e-27 125.6 67 82.1
Sc16g0007720 Simmondsia chinensis HOM05D002452 ORTHO05D006585 4.5e-27 125.2 67 86.6
TPR.G16476 Trifolium pratense HOM05D002452 ORTHO05D006585 4.5e-27 125.2 67 85.1
Ca_07451_v3 Cicer arietinum L. HOM05D002452 ORTHO05D006585 5.9e-27 124.8 67 83.6
Haze_09242 Corylus avellana HOM05D002452 ORTHO05D006585 5.9e-27 124.8 67 86.6
Gohir.A13G150900 Gossypium hirsutum HOM05D002452 ORTHO05D006585 5.9e-27 124.8 67 85.1
Gohir.D13G155000 Gossypium hirsutum HOM05D002452 ORTHO05D006585 5.9e-27 124.8 67 85.1
Gorai.013G175400 Gossypium raimondii HOM05D002452 ORTHO05D006585 5.9e-27 124.8 67 85.1
Oeu010028.4 Olea europaea HOM05D002452 ORTHO05D006585 5.9e-27 124.8 72 79.2
Os01g0749200 Oryza sativa ssp. japonica HOM05D002452 ORTHO05D006585 5.9e-27 124.8 67 83.6
unitig_26.g9516 Utricularia gibba HOM05D001036 ORTHO05D006585 5.9e-27 124.8 72 80.6
Ah.04g164060 Amaranthus hybridus HOM05D002452 ORTHO05D006585 7.7e-27 124.4 68 82.4
Solyc12g014390.3 Solanum lycopersicum HOM05D002452 ORTHO05D006585 7.7e-27 124.4 67 82.1
Sopen12g006160 Solanum pennellii HOM05D002452 ORTHO05D006585 7.7e-27 124.4 67 82.1
CANSAT56G0836 Cannabis sativa HOM05D002452 ORTHO05D006585 1.0e-26 124.0 67 86.6
MELO3C025669.2 Cucumis melo HOM05D002452 ORTHO05D006585 1.0e-26 124.0 67 85.1
CsaV3_4G032830 Cucumis sativus L. HOM05D002452 ORTHO05D006585 1.0e-26 124.0 67 85.1
Medtr8g054450 Medicago truncatula HOM05D002452 ORTHO05D006585 1.0e-26 124.0 67 83.6
PGSC0003DMG400015392 Solanum tuberosum HOM05D002452 ORTHO05D006585 1.0e-26 124.0 67 80.6
CiPaw.12G110400 Carya illinoinensis HOM05D002452 ORTHO05D006585 1.3e-26 123.6 67 83.6
Cc05_g10750 Coffea canephora HOM05D002452 ORTHO05D006585 1.3e-26 123.6 67 85.1
Eucgr.F01365 Eucalyptus grandis HOM05D002452 ORTHO05D006585 1.3e-26 123.6 67 85.1
Nitab4.5_0000092g0390 Nicotiana tabacum HOM05D002452 ORTHO05D006585 1.3e-26 123.6 67 83.6
Oeu058458.1 Olea europaea HOM05D002452 ORTHO05D006585 1.3e-26 123.6 67 82.1
Atru.chr2.2011 Acer truncatum HOM05D002452 ORTHO05D006585 1.7e-26 123.2 67 83.6
THA.LOC104813996 Tarenaya hassleriana HOM05D002452 ORTHO05D006585 1.7e-26 123.2 67 82.1
Thecc.07G130500 Theobroma cacao HOM05D002452 ORTHO05D006585 1.7e-26 123.2 67 83.6
AagrBONN_evm.TU.Sc2ySwM_344.1354 Anthoceros agrestis HOM05D002452 ORTHO05D006585 2.2e-26 122.9 66 84.8
Sed0014572 Sechium edule HOM05D002452 ORTHO05D006585 3.8e-26 122.1 67 83.6
BcaC03g15828 Brassica carinata HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
BcaC08g47424 Brassica carinata HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
A02p22280 Brassica napus HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
A07p43900 Brassica napus HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
C02p35700 Brassica napus HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
C06p52530 Brassica napus HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
BolC6t40272H Brassica oleracea HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
BraA02t07233Z Brassica rapa HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
Sp5g33720 Schrenkiella parvula HOM05D002452 ORTHO05D006585 5.0e-26 121.7 67 82.1
MD03G1248000 Malus domestica HOM05D002452 ORTHO05D006585 6.5e-26 121.3 67 80.6
Nitab4.5_0004042g0010 Nicotiana tabacum HOM05D002452 ORTHO05D006585 6.5e-26 121.3 67 82.1
Psat4g140640 Pisum sativum HOM05D002452 ORTHO05D006585 1.1e-25 120.6 67 82.1
Aa31LG4G2330 Aethionema arabicum HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
AL2G39030 Arabidopsis lyrata HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
AT1G78630 Arabidopsis thaliana HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
BcaB05g25148 Brassica carinata HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
BcaC08g47426 Brassica carinata HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
Carub.0002s2548 Capsella rubella HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
CARHR072150 Cardamine hirsuta HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
Thhalv10019066m.g Eutrema salsugineum HOM05D002452 ORTHO05D006585 1.4e-25 120.2 67 80.6
MSTRG.14251 Avicennia marina HOM05D002452 ORTHO05D006585 1.9e-25 119.8 67 82.1
SEGI_16031 Sequoiadendron giganteum HOM05D002452 ORTHO05D006585 1.9e-25 119.8 68 82.4
AUR62019642 Chenopodium quinoa HOM05D002452 ORTHO05D006585 3.2e-25 119.0 67 79.1
AUR62039507 Chenopodium quinoa HOM05D002452 ORTHO05D006585 3.2e-25 119.0 67 79.1
Gohir.A02G070000 Gossypium hirsutum HOM05D002452 ORTHO05D006585 3.2e-25 119.0 65 81.5
vmacro11967 Vaccinium macrocarpon HOM05D002452 ORTHO05D006585 3.2e-25 119.0 67 82.1
Hund10438 Selenicereus undatus HOM05D002452 ORTHO05D006585 4.2e-25 118.6 67 77.6
Gohir.A05G263900 Gossypium hirsutum HOM05D002452 ORTHO05D006585 7.2e-25 117.9 66 84.8
SGA_v2.0_scaffold130G34270 Striga asiatica HOM05D002452 ORTHO05D006585 7.2e-25 117.9 65 81.5
Pp3c24_18330 Physcomitrium patens HOM05D002452 ORTHO05D006585 3.6e-24 115.5 68 75.0
Rhsim06G0211400 Rhododendron simsii HOM05D002452 ORTHO05D006585 3.6e-24 115.5 67 80.6
BcaB05g25149 Brassica carinata HOM05D002452 ORTHO05D006585 4.7e-24 115.2 65 80.0
EL10Ac4g08413 Beta vulgaris HOM05D002452 ORTHO05D006585 6.1e-24 114.8 66 77.3
Mapoly0006s0176 Marchantia polymorpha HOM05D002452 ORTHO05D006585 6.1e-24 114.8 68 76.5
Pp3c8_22490 Physcomitrium patens HOM05D002452 ORTHO05D006585 5.1e-23 111.7 68 70.6
Pp3c20_2980 Physcomitrium patens HOM05D002452 ORTHO05D006585 8.8e-23 110.9 68 70.6
CBR_g88534 Chara braunii HOM05D002452 ORTHO05D006585 1.7e-21 106.7 68 67.6
SEGI_01417 Sequoiadendron giganteum HOM05D002452 ORTHO05D006585 1.3e-18 97.1 54 83.3
SalBow7G3921 Salvia bowleyana HOM05D002452 ORTHO05D006585 1.4e-17 93.6 63 69.8
AUR62039587 Chenopodium quinoa HOM05D002452 ORTHO05D006585 1.6e-16 90.1 55 74.5
Cre06.g264350 Chlamydomonas reinhardtii HOM05D002452 ORTHO05D006585 1.0e-15 87.4 65 58.5
PRCOL_00006181 Prasinoderma coloniale HOM05D002452 ORTHO05D006585 5.9e-11 71.6 73 45.2
SMO116G0167 Selaginella moellendorffii HOM05D002452 ORTHO05D006585 1.9e-09 66.6 47 66.0
MCO07G320 Micromonas commoda HOM05D002452 ORTHO05D006585 1.2e-06 57.4 53 43.4


User provided reference genes

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