Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 2.3e-43 178.7 105 100.0
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 7.7e-15 84.0 103 45.6
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.7e-14 82.8 98 44.9
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 2.9e-14 82.0 103 43.7
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.8e-14 81.6 103 43.7
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.5e-14 80.5 103 42.7
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.5e-13 79.0 102 41.2
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 3.2e-13 78.6 61 59.0
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 7.2e-13 77.4 98 48.0
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 9.5e-13 77.0 104 56.7
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 3.6e-12 75.1 99 44.4
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 3.6e-12 75.1 108 40.7
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 8.0e-12 73.9 68 54.4
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.8e-11 72.8 110 39.1
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 1.8e-11 72.8 60 58.3
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 2.3e-11 72.4 105 39.0
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 3.0e-11 72.0 98 37.8
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 4.0e-11 71.6 105 40.0
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.2e-10 70.1 98 50.0
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.2e-10 70.1 98 50.0
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.5e-10 69.7 64 53.1
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 2.0e-10 69.3 110 38.2
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 2.0e-10 69.3 61 57.4
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 2.6e-10 68.9 110 38.2
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 3.4e-10 68.6 60 55.0
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 5.7e-10 67.8 57 57.9
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 7.5e-10 67.4 69 52.2
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 7.5e-10 67.4 64 51.6
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 7.5e-10 67.4 112 44.6
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 9.8e-10 67.0 64 51.6
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.3e-09 66.6 55 60.0
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 2.2e-09 65.9 98 34.7
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.8e-09 65.5 62 51.6
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 2.8e-09 65.5 106 39.6
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 2.8e-09 65.5 101 40.6
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 4.9e-09 64.7 102 37.3
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 6.3e-09 64.3 100 49.0
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 6.3e-09 64.3 113 38.9
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 8.3e-09 63.9 99 38.4
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 1.1e-08 63.5 59 52.5
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 1.1e-08 63.5 55 54.5
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 1.4e-08 63.2 63 50.8
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 1.8e-08 62.8 78 44.9
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 4.1e-08 61.6 108 35.2
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 5.4e-08 61.2 108 33.3
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 7.0e-08 60.8 63 47.6
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 7.0e-08 60.8 57 56.1
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 9.2e-08 60.5 107 33.6
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 9.2e-08 60.5 56 58.9
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 1.2e-07 60.1 59 52.5
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 1.6e-07 59.7 57 52.6
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 1.6e-07 59.7 57 52.6
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.6e-07 59.7 57 52.6
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.6e-07 59.7 67 44.8
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 2.0e-07 59.3 75 42.7
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 2.0e-07 59.3 59 52.5
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 2.0e-07 59.3 55 52.7
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 2.7e-07 58.9 69 47.8
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 2.7e-07 58.9 59 47.5
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 3.5e-07 58.5 65 50.8
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 5.9e-07 57.8 68 42.6
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 7.7e-07 57.4 67 49.3
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 7.7e-07 57.4 54 55.6
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 1.3e-06 56.6 65 43.1
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 1.3e-06 56.6 72 43.1
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 1.3e-06 56.6 59 50.8
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 1.7e-06 56.2 64 46.9
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 1.7e-06 56.2 114 32.5
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 2.3e-06 55.8 61 47.5
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 2.3e-06 55.8 98 35.7
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 2.3e-06 55.8 98 35.7
HPP92_008631 Vanilla planifolia HOM05D026338 ORTHO05D007875 2.3e-06 55.8 60 43.3
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 2.9e-06 55.5 70 40.0
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 3.8e-06 55.1 64 45.3
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 3.8e-06 55.1 61 50.8
Eucgr.D01739 Eucalyptus grandis HOM05D007590 ORTHO05D007875 6.6e-06 54.3 77 45.5
Zm00001eb204270 Zea mays HOM05D021977 ORTHO05D007875 6.6e-06 54.3 57 50.9
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 8.6e-06 53.9 111 36.9


User provided reference genes

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