Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 5.6e-132 474.2 223 100.0
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 2.6e-84 315.8 216 65.7
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 1.7e-83 313.2 274 54.7
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 4.8e-83 311.6 273 56.0
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 6.3e-83 311.2 274 54.0
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.8e-82 309.7 216 63.9
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 3.1e-82 308.9 273 55.3
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.1e-82 308.9 216 65.3
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.2e-81 307.0 217 63.1
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.6e-81 306.6 273 54.2
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 1.6e-81 306.6 273 53.8
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.7e-81 305.8 216 64.4
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 1.0e-80 303.9 273 53.5
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.0e-80 303.9 216 62.0
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.3e-80 303.5 216 63.9
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 1.7e-80 303.1 216 62.5
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 2.9e-80 302.4 216 64.4
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 3.8e-80 302.0 279 53.8
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 8.5e-80 300.8 217 63.1
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.5e-79 300.1 279 53.0
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 5.5e-79 298.1 216 62.0
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 7.2e-79 297.7 216 62.0
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 3.6e-78 295.4 274 52.6
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 1.8e-77 293.1 217 59.4
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 1.8e-77 293.1 216 59.3
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.3e-77 292.7 274 51.5
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 3.0e-77 292.4 273 52.7
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 3.0e-77 292.4 273 53.5
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.0e-77 292.0 274 51.5
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 4.0e-77 292.0 273 50.9
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 8.8e-77 290.8 274 51.1
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 8.8e-77 290.8 215 59.1
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 1.2e-76 290.4 216 58.3
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 1.2e-76 290.4 271 51.3
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 1.2e-76 290.4 271 51.3
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 1.5e-76 290.0 274 50.0
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 2.0e-76 289.7 216 63.0
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.6e-76 289.3 274 50.7
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 3.4e-76 288.9 274 51.5
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 4.4e-76 288.5 215 61.9
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.4e-76 288.5 274 51.1
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 5.7e-76 288.1 217 58.5
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 5.7e-76 288.1 273 52.4
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.3e-75 287.0 216 57.9
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 1.7e-75 286.6 273 51.6
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 2.8e-75 285.8 216 60.6
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 3.7e-75 285.4 178 69.7
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 4.9e-75 285.0 217 62.7
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 4.9e-75 285.0 274 50.4
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 4.9e-75 285.0 272 50.4
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 4.9e-75 285.0 216 60.6
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 4.9e-75 285.0 216 59.7
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 6.3e-75 284.6 216 58.8
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 6.3e-75 284.6 216 59.7
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.4e-74 283.5 216 60.6
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 2.4e-74 282.7 216 59.3
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 3.1e-74 282.3 217 60.4
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 3.1e-74 282.3 216 60.2
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 3.1e-74 282.3 216 59.3
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 1.2e-73 280.4 216 61.1
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 2.0e-73 279.6 216 59.3
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 7.7e-73 277.7 216 58.3
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.0e-72 277.3 216 57.4
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.3e-72 276.9 221 58.8
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 1.3e-72 276.9 273 49.8
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.7e-72 276.6 263 50.2
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.3e-72 276.2 216 60.2
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 2.3e-72 276.2 195 62.6
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 2.9e-72 275.8 216 59.3
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 5.0e-72 275.0 273 50.2
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 6.6e-72 274.6 190 65.8
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 8.6e-72 274.2 215 58.6
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 5.6e-71 271.6 216 57.4
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 7.3e-71 271.2 234 55.6
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 2.1e-70 269.6 189 64.6
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.8e-70 269.2 216 59.7
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 6.1e-70 268.1 189 63.0
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 8.0e-70 267.7 232 54.7
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.0e-69 267.3 275 47.3
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 1.8e-69 266.5 189 63.5
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 2.3e-69 266.2 242 53.3
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 2.0e-68 263.1 190 61.6
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 2.0e-68 263.1 216 56.9
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.3e-67 260.4 214 54.7
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 3.7e-67 258.8 258 49.2
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 4.9e-67 258.5 190 62.1
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 6.4e-67 258.1 205 60.0
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 4.6e-65 251.9 249 49.0
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 3.9e-64 248.8 219 52.1
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 3.9e-64 248.8 188 56.9
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 5.6e-63 245.0 188 57.4
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 3.6e-62 242.3 189 59.8
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 6.2e-62 241.5 180 61.7
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 2.0e-60 236.5 216 53.2
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 1.7e-59 233.4 222 52.7
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 4.9e-59 231.9 190 58.9
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.3e-55 219.2 192 53.1
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.2e-54 217.2 165 60.6
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 1.6e-54 216.9 231 48.5
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 6.2e-54 214.9 216 46.8
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.6e-52 209.5 215 47.4
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 3.5e-49 199.1 152 58.6
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 6.0e-49 198.4 207 51.2
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.3e-48 196.4 212 47.2
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 8.6e-48 194.5 190 50.0
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 5.6e-47 191.8 304 36.8
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 1.4e-45 187.2 137 63.5
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.3e-45 186.4 212 46.2
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 4.4e-44 182.2 152 54.6
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 1.7e-43 180.3 273 39.2
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 3.8e-43 179.1 209 42.1
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 4.9e-43 178.7 260 35.4
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.9e-42 176.8 252 34.9
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 1.0e-40 171.0 126 62.7
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 2.3e-40 169.9 117 65.0
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 5.1e-40 168.7 115 65.2
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.9e-39 166.8 119 62.2
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 1.1e-37 161.0 127 52.8
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 3.1e-37 159.5 188 44.7
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 5.2e-37 158.7 218 39.4
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 1.3e-35 154.1 137 54.0
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 1.7e-35 153.7 202 42.6
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 4.9e-35 152.1 119 59.7
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.4e-34 148.7 164 50.0
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.6e-33 147.1 119 51.3
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 6.9e-29 131.7 109 56.0
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 2.6e-28 129.8 112 52.7
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 1.0e-24 117.9 181 35.4
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 2.8e-22 109.8 151 37.7
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 8.1e-22 108.2 133 42.1
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.0e-20 103.6 105 46.7
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 9.9e-20 101.3 77 55.8
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 1.3e-19 100.9 62 72.6
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 2.7e-17 93.2 73 54.8
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.3e-15 85.9 66 54.5
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 2.8e-14 83.2 63 58.7
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 1.2e-12 77.8 73 46.6
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 3.8e-11 72.8 112 33.9
MD07G1149100 Malus domestica HOM05D000590 ORTHO05D006825 8.7e-08 61.6 47 55.3
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 4.3e-07 59.3 46 54.3


User provided reference genes

Program Settings