Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g08186_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 1.8e-87 325.9 162 100.0
MBI18_g22343_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 2.7e-19 99.4 127 40.2
MBI15_g12401_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 3.7e-16 89.0 115 42.6
Eucgr.G01582 Eucalyptus grandis HOM05D000002 ORTHO05D000047 5.9e-14 81.6 156 34.6
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.9e-13 79.3 156 34.0
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 8.0e-11 71.2 134 31.3
Rhsim06G0010400 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.0e-11 71.2 132 27.3
Rhsim12G0120200 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.0e-11 71.2 132 27.3
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 3.0e-10 69.3 134 30.6
Rhsim12G0065600 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.0e-10 69.3 132 28.0
TPR.G32024 Trifolium pratense HOM05D000002 ORTHO05D000047 3.0e-10 69.3 137 32.1
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 3.0e-10 69.3 128 32.8
Rhsim01G0108500 Rhododendron simsii HOM05D000002 ORTHO05D000047 4.0e-10 68.9 132 28.0
TPR.G38964 Trifolium pratense HOM05D000002 ORTHO05D000047 4.0e-10 68.9 134 31.3
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 5.2e-10 68.6 134 30.6
Duzib168G0509 Durio zibethinus HOM05D000002 ORTHO05D000047 5.2e-10 68.6 134 30.6
Rhsim02G0004200 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.2e-10 68.6 132 26.5
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.2e-10 68.6 154 27.9
Rhsim06G0127400 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.8e-10 68.2 164 28.0
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 8.8e-10 67.8 134 30.6
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 8.8e-10 67.8 134 30.6
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 8.8e-10 67.8 134 30.6
Sabra16G0048200 Salix brachista HOM05D000002 ORTHO05D000047 8.8e-10 67.8 132 30.3
vmacro23149 Vaccinium macrocarpon HOM05D064014 ORTHO05D000047 1.2e-09 67.4 134 32.1
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 2.0e-09 66.6 134 30.6
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 2.6e-09 66.2 134 29.9
PSO782G0209 Papaver somniferum HOM05D000002 ORTHO05D000047 2.6e-09 66.2 134 29.1
Rhsim11G0081200 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.6e-09 66.2 131 26.7
Hma1.2p1_0570F.1_g180540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-09 65.9 132 26.5
RcHm_v2.0_Chr4g0388371 Rosa chinensis HOM05D000002 ORTHO05D000047 3.4e-09 65.9 174 26.4
Sabra16G0122200 Salix brachista HOM05D000002 ORTHO05D000047 3.4e-09 65.9 132 26.5
Sabra16G0131100 Salix brachista HOM05D000002 ORTHO05D000047 3.4e-09 65.9 132 26.5
Sabra16G0276500 Salix brachista HOM05D000002 ORTHO05D000047 3.4e-09 65.9 132 26.5
Hma1.2p1_1117F.1_g259070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.4e-09 65.5 132 26.5
Rhsim05G0175500 Rhododendron simsii HOM05D000244 ORTHO05D000047 5.7e-09 65.1 133 33.1
Hma1.2p1_0384F.1_g140880 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-09 64.7 132 27.3
SEGI_17012 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.5e-09 64.7 151 27.2
TPR.G5314 Trifolium pratense HOM05D000002 ORTHO05D000047 7.5e-09 64.7 155 27.7
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 7.5e-09 64.7 134 30.6
Atru.chr10.709 Acer truncatum HOM05D000002 ORTHO05D000047 9.8e-09 64.3 135 29.6
Rhsim03G0137800 Rhododendron simsii HOM05D001360 ORTHO05D001231 9.8e-09 64.3 131 25.2
Rhsim05G0165100 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.8e-09 64.3 130 26.2
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-08 63.9 168 28.0
Hma1.2p1_0578F.1_g182525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-08 63.9 131 24.4
Hma1.2p1_1936F.1_g308230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-08 63.9 171 27.5
MBI15_g12950_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 1.3e-08 63.9 74 45.9
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 1.3e-08 63.9 133 27.8
Sabra04G0117900 Salix brachista HOM05D000002 ORTHO05D000047 1.3e-08 63.9 164 23.8
SEGI_03840 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.3e-08 63.9 151 27.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.3e-08 63.9 116 33.6
MSTRG.15123 Avicennia marina HOM05D000002 ORTHO05D000001 1.7e-08 63.5 133 30.1
MSTRG.16329 Avicennia marina HOM05D000002 ORTHO05D000047 1.7e-08 63.5 133 30.1
ECA240G0648 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-08 63.5 137 28.5
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 63.2 154 26.6
SEGI_27629 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.2e-08 63.2 133 27.8
vmacro14864 Vaccinium macrocarpon HOM05D001069 ORTHO05D009886 2.2e-08 63.2 140 32.1
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 2.2e-08 63.2 154 27.3
ECA248G2087 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-08 62.4 133 27.1
Hma1.2p1_0182F.1_g080480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-08 62.4 170 27.6
Hma1.2p1_1132F.1_g260270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-08 62.4 170 27.6
Hma1.2p1_1214F.1_g267555 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-08 62.4 170 27.6
Hma1.2p1_1214F.1_g267560 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-08 62.4 170 27.6
Hma1.2p1_1594F.1_g292660 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-08 62.4 170 27.6
Hma1.2p1_2815F.1_g328920 Hydrangea macrophylla HOM05D002126 ORTHO05D002195 3.7e-08 62.4 170 27.6
Sabra07G0044700 Salix brachista HOM05D000002 ORTHO05D000047 3.7e-08 62.4 173 22.0
TPR.G24210 Trifolium pratense HOM05D000002 ORTHO05D000047 3.7e-08 62.4 137 24.8
Ah.02g115850 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.9e-08 62.0 139 25.2
MD04G1051300 Malus domestica HOM05D000002 ORTHO05D000001 4.9e-08 62.0 172 25.6
TPR.G27746 Trifolium pratense HOM05D000002 ORTHO05D000047 4.9e-08 62.0 137 27.7
TPR.G8352 Trifolium pratense HOM05D000002 ORTHO05D000047 4.9e-08 62.0 174 23.0
Hma1.2p1_0046F.1_g026950 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-08 61.6 132 25.8
Hma1.2p1_0375F.1_g138960 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-08 61.6 163 27.6
PGR031G0692 Punica granatum HOM05D000002 ORTHO05D000047 6.3e-08 61.6 154 27.9
MD17G1267900 Malus domestica HOM05D000002 ORTHO05D000001 8.3e-08 61.2 132 22.7
PGR044G2298 Punica granatum HOM05D000002 ORTHO05D000047 8.3e-08 61.2 123 29.3
Atru.chr9.1414 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-07 60.8 132 28.0
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-07 60.8 134 29.1
Rhsim09G0014100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-07 60.8 132 25.8
Rhsim09G0021000 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.1e-07 60.8 132 25.8
RhsimUnG0055800 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.1e-07 60.8 132 25.8
SEGI_33603 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-07 60.8 151 27.2
TPR.G183 Trifolium pratense HOM05D000002 ORTHO05D000047 1.1e-07 60.8 137 24.1
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 1.1e-07 60.8 157 28.0
ECA238G4187 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-07 60.5 158 31.0
Rhsim10G0106300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.4e-07 60.5 132 25.8
Rhsim10G0107100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.4e-07 60.5 132 25.8
vmacro05505 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.4e-07 60.5 157 26.8
CANSAT56G3298 Cannabis sativa HOM05D000002 ORTHO05D000047 1.8e-07 60.1 132 24.2
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.1 134 26.9
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.1 134 26.9
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.1 134 26.9
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.1 134 26.9
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.1 134 26.9
Hma1.2p1_0592F.1_g185450 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 60.1 132 27.3
PGR083G0316 Punica granatum HOM05D000002 ORTHO05D000047 1.8e-07 60.1 132 28.0
SEGI_10748 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.8e-07 60.1 149 26.8
CANSAT25G0244 Cannabis sativa HOM05D000002 ORTHO05D000047 2.4e-07 59.7 167 24.0
MD10G1237700 Malus domestica HOM05D000002 ORTHO05D000047 2.4e-07 59.7 134 28.4
MD12G1154200 Malus domestica HOM05D000002 ORTHO05D000001 2.4e-07 59.7 123 29.3
vmacro22644 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 2.4e-07 59.7 152 30.9
Atru.ctg802.2 Acer truncatum HOM05D000002 ORTHO05D000001 3.1e-07 59.3 132 24.2
Lalb_Chr23g0273761 Lupinus albus HOM05D000002 ORTHO05D000047 3.1e-07 59.3 142 25.4
SHI01914 Sapria himalayana HOM05D000002 ORTHO05D000047 3.1e-07 59.3 171 25.1
SHI23543 Sapria himalayana HOM05D000002 ORTHO05D000047 3.1e-07 59.3 100 29.0
SEGI_41209 Sequoiadendron giganteum HOM05D001800 ORTHO05D000047 3.1e-07 59.3 153 25.5
TWI12G0485 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 3.1e-07 59.3 133 27.8
vmacro12534 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 3.1e-07 59.3 152 31.6
PGR142G0044 Punica granatum HOM05D000002 ORTHO05D000047 4.1e-07 58.9 132 28.8
Rhsim08G0117000 Rhododendron simsii HOM05D002269 ORTHO05D002421 4.1e-07 58.9 136 27.2
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 4.1e-07 58.9 153 26.1
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.4e-07 58.5 134 26.1
Rhsim04G0189400 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.4e-07 58.5 137 27.0
TPR.G28102 Trifolium pratense HOM05D000002 ORTHO05D000047 5.4e-07 58.5 166 25.3
ECA234G1315 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.0e-07 58.2 153 28.8
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 7.0e-07 58.2 159 23.9
Hma1.2p1_2653F.1_g326190 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-07 58.2 163 27.0
Rhsim03G0044200 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.0e-07 58.2 132 25.0
vmacro13138 Vaccinium macrocarpon HOM05D001282 ORTHO05D009886 7.0e-07 58.2 139 30.2
EL10Ac4g09427 Beta vulgaris HOM05D000002 ORTHO05D000047 9.2e-07 57.8 180 26.1
ECA246G0219 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-07 57.8 140 27.1
PGR142G0434 Punica granatum HOM05D000002 ORTHO05D000047 9.2e-07 57.8 134 27.6
Sabra17G0008600 Salix brachista HOM05D000002 ORTHO05D000047 9.2e-07 57.8 125 24.8
Lalb_Chr15g0078731 Lupinus albus HOM05D000002 ORTHO05D000047 1.2e-06 57.4 138 27.5
PGR004G1445 Punica granatum HOM05D000002 ORTHO05D000047 1.2e-06 57.4 123 28.5
PGR142G0077 Punica granatum HOM05D000002 ORTHO05D000047 1.2e-06 57.4 132 28.0
Thecc.06G106100 Theobroma cacao HOM05D000002 ORTHO05D000047 1.2e-06 57.4 137 27.0
Atru.chr11.1318 Acer truncatum HOM05D004129 ORTHO05D005039 1.6e-06 57.0 175 27.4
CSS0046924 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-06 57.0 144 28.5
CANSAT56G0645 Cannabis sativa HOM05D000002 ORTHO05D000047 1.6e-06 57.0 136 25.7
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 1.6e-06 57.0 168 25.0
PGR083G0605 Punica granatum HOM05D000002 ORTHO05D000047 1.6e-06 57.0 132 24.2
Sabra10G0016600 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-06 57.0 133 27.8
Sabra14G0120100 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-06 57.0 133 27.8
Sabra18G0083300 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-06 57.0 133 27.8
SEGI_28989 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-06 57.0 151 25.2
TPR.G835 Trifolium pratense HOM05D000002 ORTHO05D000047 1.6e-06 57.0 138 25.4
Hma1.2p1_0275F.1_g110880 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-06 56.6 132 25.0
Rhsim03G0156500 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.0e-06 56.6 109 26.6
TPR.G33357 Trifolium pratense HOM05D000002 ORTHO05D000047 2.0e-06 56.6 153 26.8
TWI18G0261 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.0e-06 56.6 161 26.7
Ah.05g170980 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.7e-06 56.2 138 23.2
ECA236G3741 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 56.2 133 25.6
ECA240G0684 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 56.2 164 28.7
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 2.7e-06 56.2 165 24.8
PGR083G0359 Punica granatum HOM05D000002 ORTHO05D000047 2.7e-06 56.2 79 35.4
Rhsim01G0137000 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.7e-06 56.2 132 26.5
Sabra05G0164100 Salix brachista HOM05D000002 ORTHO05D000047 2.7e-06 56.2 159 27.0
TWI56G0827 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.7e-06 56.2 159 28.3
COL.COLO4_03834 Corchorus olitorius HOM05D000002 ORTHO05D000047 3.5e-06 55.8 133 26.3
ECA236G0026 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-06 55.8 141 29.1
ECA238G2753 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-06 55.8 153 29.4
PGR142G2976 Punica granatum HOM05D000002 ORTHO05D000047 3.5e-06 55.8 132 27.3
Rhsim02G0191000 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.5e-06 55.8 120 29.2
Sabra19G0055400 Salix brachista HOM05D000002 ORTHO05D000047 3.5e-06 55.8 125 25.6
SHI00431 Sapria himalayana HOM05D000002 ORTHO05D000047 3.5e-06 55.8 132 24.2
TAR129G0002 Trochodendron aralioides HOM05D007305 ORTHO05D009886 3.5e-06 55.8 83 37.3
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 3.5e-06 55.8 151 28.5
vmacro09324 Vaccinium macrocarpon HOM05D001891 ORTHO05D004048 3.5e-06 55.8 114 32.5
Ah.03g140980 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.5e-06 55.5 139 28.1
CSS0037966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.5e-06 55.5 120 25.8
Cpa.g.sc6.416 Carica papaya HOM05D000002 ORTHO05D000047 4.5e-06 55.5 142 25.4
ECA232G4139 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.5e-06 55.5 137 27.0
Migut.K01133 Erythranthe guttata HOM05D000002 ORTHO05D000047 4.5e-06 55.5 84 34.5
PGR031G1334 Punica granatum HOM05D000002 ORTHO05D000047 4.5e-06 55.5 134 28.4
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 4.5e-06 55.5 156 26.9
CANSAT01G2009 Cannabis sativa HOM05D000002 ORTHO05D000047 5.9e-06 55.1 133 24.8
Hma1.2p1_0088F.1_g044990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.9e-06 55.1 124 28.2
Nn1g00812 Nelumbo nucifera HOM05D000002 ORTHO05D000047 5.9e-06 55.1 118 28.8
Sabra15G0058800 Salix brachista HOM05D000002 ORTHO05D000047 5.9e-06 55.1 159 26.4
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 5.9e-06 55.1 156 26.9
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 7.7e-06 54.7 154 27.9
CANSAT56G4400 Cannabis sativa HOM05D000002 ORTHO05D000047 7.7e-06 54.7 136 24.3
ECA236G4800 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 130 29.2
Hma1.2p1_0110F.1_g052700 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.7e-06 54.7 161 24.8
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 7.7e-06 54.7 154 24.0


User provided reference genes

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