Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 2.2e-188 662.1 332 100.0
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 3.7e-111 405.6 322 67.1
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 1.1e-110 404.1 328 65.5
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 3.4e-109 399.1 328 63.7
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 4.5e-109 398.7 295 69.8
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 6.5e-108 394.8 324 64.8
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 3.2e-107 392.5 310 65.8
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 5.5e-107 391.7 321 62.9
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 3.0e-105 386.0 329 62.6
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 3.0e-105 386.0 329 62.6
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 1.9e-104 383.3 330 64.8
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 4.3e-104 382.1 326 63.2
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 1.3e-103 380.6 327 63.0
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 3.7e-103 379.0 317 61.8
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 3.7e-103 379.0 332 64.5
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 4.8e-103 378.6 327 61.8
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 8.2e-103 377.9 337 62.9
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.1e-102 377.5 317 62.1
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 1.4e-102 377.1 328 62.8
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 1.8e-102 376.7 293 66.9
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 4.1e-102 375.6 311 64.0
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 2.0e-101 373.2 323 63.5
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 2.0e-101 373.2 319 62.1
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 2.2e-100 369.8 330 62.4
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 2.2e-100 369.8 332 61.7
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 6.5e-100 368.2 324 61.7
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.6e-98 363.6 331 59.5
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 3.6e-98 362.5 311 63.3
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.4e-97 360.5 339 57.5
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 1.8e-97 360.1 300 60.3
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 2.3e-97 359.8 330 60.0
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.3e-97 359.8 338 59.2
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 2.3e-97 359.8 337 58.8
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 3.9e-97 359.0 295 62.7
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 8.8e-97 357.8 328 59.8
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.1e-96 357.5 286 63.3
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 2.0e-96 356.7 331 58.9
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 4.4e-96 355.5 332 58.7
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 4.4e-96 355.5 312 60.9
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.7e-95 353.6 292 64.0
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 2.8e-95 352.8 307 59.3
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 8.2e-95 351.3 331 58.3
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 9.1e-94 347.8 327 57.8
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 1.5e-93 347.1 297 62.6
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 2.0e-93 346.7 321 59.8
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.0e-92 344.4 338 54.1
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 1.3e-92 344.0 294 60.5
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 1.3e-92 344.0 292 60.6
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 1.7e-92 343.6 271 65.7
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 2.2e-92 343.2 266 65.0
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 5.0e-92 342.0 326 56.4
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 1.1e-91 340.9 285 60.0
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 2.5e-91 339.7 312 57.1
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 3.2e-91 339.3 302 62.3
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 4.2e-91 339.0 295 59.7
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 4.2e-91 339.0 292 59.6
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 5.5e-91 338.6 287 60.6
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 2.1e-90 336.7 321 54.8
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 2.7e-90 336.3 279 62.0
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 2.7e-90 336.3 294 59.9
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 3.6e-90 335.9 303 56.8
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 3.6e-90 335.9 326 56.1
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 3.6e-90 335.9 313 57.2
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 3.6e-90 335.9 334 56.0
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 4.7e-90 335.5 287 58.9
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 4.7e-90 335.5 287 58.9
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.0e-89 334.3 350 51.1
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.4e-89 334.0 270 63.3
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 1.1e-88 330.9 325 55.1
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 1.1e-88 330.9 301 57.1
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 1.1e-88 330.9 285 58.6
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 5.7e-88 328.6 317 55.2
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 7.4e-88 328.2 325 54.5
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 7.4e-88 328.2 364 50.3
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 9.7e-88 327.8 318 53.8
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 9.7e-88 327.8 327 55.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 9.7e-88 327.8 292 58.6
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.7e-87 327.0 314 58.9
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 2.2e-87 326.6 285 57.5
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 2.2e-87 326.6 321 53.9
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 3.7e-87 325.9 295 56.6
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 4.8e-87 325.5 330 52.1
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 6.3e-87 325.1 331 55.0
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 6.3e-87 325.1 292 58.6
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 1.1e-86 324.3 288 60.1
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.4e-86 323.9 263 61.2
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 3.1e-86 322.8 324 54.0
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 9.1e-86 321.2 286 57.3
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 2.0e-85 320.1 294 56.8
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 2.0e-85 320.1 298 57.7
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 1.0e-84 317.8 340 52.4
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 7.2e-83 311.6 397 47.6
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 9.4e-83 311.2 422 45.7
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 3.3e-80 302.8 330 52.1
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 1.2e-74 284.3 334 48.5
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 3.4e-72 276.2 225 64.0
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 7.5e-72 275.0 267 55.1
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 2.4e-70 270.0 223 64.1
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 3.1e-70 269.6 279 49.1
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 9.1e-70 268.1 291 46.4
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.0e-68 264.6 247 57.9
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.0e-68 264.6 291 48.1
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 3.8e-68 262.7 331 46.2
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 1.2e-66 257.7 246 53.7
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 1.0e-65 254.6 258 51.6
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 1.8e-62 243.8 200 67.5
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 2.4e-62 243.4 233 54.1
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 2.7e-61 240.0 309 46.3
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 8.6e-60 235.0 324 44.4
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 8.6e-60 235.0 269 46.8
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 3.3e-59 233.0 185 63.8
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 4.0e-57 226.1 187 63.1
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 2.9e-55 219.9 308 39.9
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 7.3e-51 205.3 283 40.3
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 9.8e-48 194.9 177 61.0
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 2.3e-44 183.7 328 37.8
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 3.3e-43 179.9 177 51.4
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 1.8e-41 174.1 122 68.9
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 4.0e-41 172.9 282 36.9
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 3.6e-34 149.8 238 39.1
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 5.3e-25 119.4 198 37.9
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 7.6e-24 115.5 87 59.8
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 1.7e-20 104.4 90 52.2


User provided reference genes

Program Settings