Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 1.6e-30 135.6 75 100.0
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 4.2e-23 110.9 73 86.3
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 4.2e-23 110.9 77 84.4
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 9.4e-23 109.8 77 81.8
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 1.6e-22 109.0 74 82.4
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 2.7e-22 108.2 76 80.3
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 8.0e-22 106.7 76 77.6
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 5.2e-21 104.0 73 78.1
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.0e-20 102.1 76 76.3
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.0e-20 102.1 76 76.3
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 2.6e-20 101.7 77 75.3
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 2.6e-20 101.7 77 79.2
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 4.4e-20 100.9 76 77.6
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 4.4e-20 100.9 78 78.2
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 7.4e-20 100.1 75 73.3
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 1.3e-19 99.4 73 74.0
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.7e-19 99.0 77 76.6
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 1.7e-19 99.0 69 81.2
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 1.7e-19 99.0 69 81.2
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 75.3
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.2e-19 98.6 74 73.0
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 2.8e-19 98.2 77 76.6
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 3.7e-19 97.8 77 75.3
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 4.8e-19 97.4 68 82.4
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 4.8e-19 97.4 68 82.4
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 4.8e-19 97.4 68 82.4
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 4.8e-19 97.4 68 82.4
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 6.3e-19 97.1 76 69.7
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 6.3e-19 97.1 76 69.7
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 6.3e-19 97.1 76 69.7
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 6.3e-19 97.1 76 69.7
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 6.3e-19 97.1 76 69.7
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 8.2e-19 96.7 76 68.4
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 8.2e-19 96.7 77 74.0
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.1e-18 96.3 74 73.0
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 1.1e-18 96.3 77 76.6
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 1.4e-18 95.9 77 75.3
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.4e-18 95.9 77 75.3
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 1.8e-18 95.5 75 69.3
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 1.8e-18 95.5 77 75.3
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.8e-18 95.5 74 70.3
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 2.4e-18 95.1 77 76.6
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 3.1e-18 94.7 77 76.6
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 4.1e-18 94.4 74 71.6
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 4.1e-18 94.4 77 76.6
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 4.1e-18 94.4 77 70.1
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 4.1e-18 94.4 72 70.8
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 5.3e-18 94.0 69 76.8
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 5.3e-18 94.0 69 75.4
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 7.0e-18 93.6 73 75.3
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 9.1e-18 93.2 74 71.6
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 9.1e-18 93.2 76 65.8
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 9.1e-18 93.2 76 65.8
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 9.1e-18 93.2 73 74.0
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 9.1e-18 93.2 77 72.7
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 1.2e-17 92.8 77 74.0
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 1.2e-17 92.8 78 67.9
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.2e-17 92.8 73 68.5
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 1.2e-17 92.8 76 75.0
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 1.2e-17 92.8 76 75.0
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 1.2e-17 92.8 77 74.0
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 2.0e-17 92.0 74 64.9
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 2.0e-17 92.0 76 71.1
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 2.0e-17 92.0 69 78.3
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.6e-17 91.7 69 76.8
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 2.6e-17 91.7 77 71.4
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 2.6e-17 91.7 72 75.0
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.5e-17 91.3 77 71.4
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 3.5e-17 91.3 73 72.6
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 4.5e-17 90.9 78 70.5
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 5.9e-17 90.5 64 79.7
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 7.7e-17 90.1 76 64.5
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 7.7e-17 90.1 76 64.5
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 7.7e-17 90.1 76 71.1
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 7.7e-17 90.1 77 70.1
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 1.0e-16 89.7 79 69.6
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.0e-16 89.7 79 69.6
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.0e-16 89.7 79 69.6
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.0e-16 89.7 79 69.6
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 1.0e-16 89.7 73 71.2
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.0e-16 89.7 73 71.2
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 1.3e-16 89.4 76 65.8
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 1.3e-16 89.4 76 68.4
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 1.3e-16 89.4 77 74.0
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 1.7e-16 89.0 76 75.0
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 1.7e-16 89.0 73 71.2
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 1.7e-16 89.0 72 73.6
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 1.7e-16 89.0 70 71.4
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 2.2e-16 88.6 76 63.2
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 2.2e-16 88.6 68 75.0
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 2.9e-16 88.2 77 71.4
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 2.9e-16 88.2 77 71.4
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 3.8e-16 87.8 76 64.5
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 3.8e-16 87.8 69 68.1
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 3.8e-16 87.8 74 63.5
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 6.5e-16 87.0 75 66.7
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 8.5e-16 86.7 72 65.3
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 1.1e-15 86.3 73 68.5
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.1e-15 86.3 72 65.3
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 1.5e-15 85.9 76 72.4
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 1.5e-15 85.9 76 63.2
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 1.5e-15 85.9 76 72.4
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 1.9e-15 85.5 74 63.5
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 2.5e-15 85.1 76 64.5
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 2.5e-15 85.1 77 63.6
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 3.2e-15 84.7 78 65.4
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 4.2e-15 84.3 72 62.5
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.5e-15 84.0 72 65.3
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.5e-15 84.0 72 65.3
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 9.4e-15 83.2 69 63.8
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 9.4e-15 83.2 73 64.4
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 9.4e-15 83.2 77 66.2
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 1.6e-14 82.4 72 62.5
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 1.6e-14 82.4 76 60.5
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 1.6e-14 82.4 76 63.2
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 3.6e-14 81.3 69 65.2
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 3.6e-14 81.3 48 87.5
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 6.1e-14 80.5 72 68.1
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 8.0e-14 80.1 69 62.3
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.2e-12 76.3 48 79.2
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 2.0e-12 75.5 78 64.1
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.0e-12 75.5 125 41.6
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 7.5e-12 73.6 47 78.7
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 9.7e-12 73.2 49 77.6
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 1.7e-11 72.4 77 51.9
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 2.8e-11 71.6 47 78.7
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 6.3e-11 70.5 72 58.3
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 1.8e-10 68.9 47 74.5
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 3.1e-10 68.2 77 55.8
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 5.3e-10 67.4 75 49.3
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 2.7e-09 65.1 59 64.4
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 3.5e-09 64.7 76 63.2
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 3.2e-07 58.2 76 46.1
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 3.2e-07 58.2 61 63.9
MCO07G725 Micromonas commoda HOM05D005517 ORTHO05D006760 3.6e-06 54.7 70 47.1
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 3.6e-06 54.7 59 54.2


User provided reference genes

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