Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g06678_MAGBIO Magnolia biondii HOM05D006417 ORTHO05D008113 4.4e-53 211.1 109 100.0
AL1G27360 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 5.5e-24 114.4 65 93.8
AT1G15270 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 5.5e-24 114.4 65 93.8
Carub.0001s1503 Capsella rubella HOM05D006417 ORTHO05D008113 5.5e-24 114.4 65 93.8
CsaV3_3G010850 Cucumis sativus L. HOM05D006417 ORTHO05D008113 5.5e-24 114.4 74 83.8
Sed0026778 Sechium edule HOM05D006417 ORTHO05D008113 4.7e-23 111.3 65 90.8
TAR626G0232 Trochodendron aralioides HOM05D006417 ORTHO05D008113 4.7e-23 111.3 65 90.8
BcaB03g13069 Brassica carinata HOM05D006417 ORTHO05D008113 6.1e-23 110.9 65 90.8
BcaC07g38776 Brassica carinata HOM05D006417 ORTHO05D008113 1.0e-22 110.2 65 89.2
BcaC07g41515 Brassica carinata HOM05D006417 ORTHO05D008113 1.0e-22 110.2 65 89.2
A08p31670 Brassica napus HOM05D006417 ORTHO05D008113 1.0e-22 110.2 65 89.2
A09p61510 Brassica napus HOM05D006417 ORTHO05D008113 1.0e-22 110.2 65 89.2
CARHR015790 Cardamine hirsuta HOM05D006417 ORTHO05D008113 1.0e-22 110.2 65 89.2
Sp1g13580 Schrenkiella parvula HOM05D006417 ORTHO05D008113 1.0e-22 110.2 65 89.2
ATR0724G030 Amborella trichopoda HOM05D006417 ORTHO05D008113 1.4e-22 109.8 65 90.8
Aqoxy7G03790 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 1.4e-22 109.8 65 89.2
Hma1.2p1_2039F.1_g312170 Hydrangea macrophylla HOM05D006417 ORTHO05D008113 1.4e-22 109.8 63 90.5
Aa31LG4G200 Aethionema arabicum HOM05D006417 ORTHO05D008113 1.8e-22 109.4 65 89.2
BcaC05g25455 Brassica carinata HOM05D006417 ORTHO05D008113 1.8e-22 109.4 65 89.2
BcaC05g25459 Brassica carinata HOM05D006417 ORTHO05D008113 1.8e-22 109.4 65 89.2
Ciclev10026914m.g Citrus clementina HOM05D006417 ORTHO05D008113 2.3e-22 109.0 65 89.2
Aqoxy7G01686 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 3.0e-22 108.6 65 87.7
FAN14G4157 Fragaria x ananassa HOM05D006417 ORTHO05D008113 3.0e-22 108.6 65 89.2
ClCG02G009660 Citrullus lanatus HOM05D006417 ORTHO05D008113 4.0e-22 108.2 65 87.7
Medtr4g012800 Medicago truncatula HOM05D006417 ORTHO05D008113 4.0e-22 108.2 65 86.2
Psat7g250440 Pisum sativum HOM05D006417 ORTHO05D008113 4.0e-22 108.2 65 86.2
Prupe.3G069900 Prunus persica HOM05D006417 ORTHO05D008113 4.0e-22 108.2 65 87.7
unitig_27.g25076 Utricularia gibba HOM05D006417 ORTHO05D008113 4.0e-22 108.2 82 73.2
Lj3g0004039 Lotus japonicus HOM05D006417 ORTHO05D008113 5.2e-22 107.8 65 86.2
Lalb_Chr01g0012721 Lupinus albus HOM05D006417 ORTHO05D008113 5.2e-22 107.8 65 86.2
Sed0004760 Sechium edule HOM05D006417 ORTHO05D008113 5.2e-22 107.8 65 87.7
Gohir.A09G082600 Gossypium hirsutum HOM05D006417 ORTHO05D008113 6.8e-22 107.5 65 87.7
FAN02G0035 Fragaria x ananassa HOM05D006417 ORTHO05D008113 8.9e-22 107.1 65 87.7
RcHm_v2.0_Chr2g0138111 Rosa chinensis HOM05D006417 ORTHO05D008113 8.9e-22 107.1 65 87.7
CANSAT56G0242 Cannabis sativa HOM05D006417 ORTHO05D008113 1.2e-21 106.7 65 86.2
MD17G1194100 Malus domestica HOM05D006417 ORTHO05D008113 1.2e-21 106.7 65 86.2
Potri.001G181800 Populus trichocarpa HOM05D006417 ORTHO05D008113 1.2e-21 106.7 65 87.7
SalBow2G2995 Salvia bowleyana HOM05D006417 ORTHO05D008113 1.2e-21 106.7 65 86.2
Gohir.D09G082500 Gossypium hirsutum HOM05D006417 ORTHO05D008113 1.5e-21 106.3 65 86.2
Atru.chr1.3302 Acer truncatum HOM05D006417 ORTHO05D008113 2.0e-21 105.9 65 86.2
ClCG05G003220 Citrullus lanatus HOM05D006417 ORTHO05D008113 2.0e-21 105.9 65 84.6
FAN05G1876 Fragaria x ananassa HOM05D006417 ORTHO05D008113 2.0e-21 105.9 65 86.2
HPP92_003724 Vanilla planifolia HOM05D002497 ORTHO05D002697 2.0e-21 105.9 66 83.3
Lj5A59T64 Lonicera japonica HOM05D006417 ORTHO05D008113 2.6e-21 105.5 65 86.2
Glyma.08G206000 Glycine max HOM05D006417 ORTHO05D008113 3.4e-21 105.1 65 83.1
Dinv38039 Davidia involucrata HOM05D006417 ORTHO05D008113 4.4e-21 104.8 65 89.2
Manes.04G124600 Manihot esculenta HOM05D006417 ORTHO05D008113 4.4e-21 104.8 74 79.7
Thecc.06G089800 Theobroma cacao HOM05D006417 ORTHO05D008113 4.4e-21 104.8 65 84.6
Glyma.07G005600 Glycine max HOM05D006417 ORTHO05D008113 5.7e-21 104.4 65 83.1
RcHm_v2.0_Chr2g0106421 Rosa chinensis HOM05D006417 ORTHO05D008113 5.7e-21 104.4 65 86.2
FAN09G4522 Fragaria x ananassa HOM05D006417 ORTHO05D008113 9.8e-21 103.6 65 84.6
Phvul.010G150000 Phaseolus vulgaris HOM05D006417 ORTHO05D008113 1.3e-20 103.2 65 80.0
A06p11260 Brassica napus HOM05D006417 ORTHO05D008113 1.7e-20 102.8 62 87.1
C08p45090 Brassica napus HOM05D006417 ORTHO05D008113 1.7e-20 102.8 62 87.1
BolC8t52055H Brassica oleracea HOM05D006417 ORTHO05D008113 1.7e-20 102.8 62 87.1
BraA06t24306Z Brassica rapa HOM05D006417 ORTHO05D008113 1.7e-20 102.8 62 87.1
BraA09t41524Z Brassica rapa HOM05D006417 ORTHO05D008113 1.7e-20 102.8 62 87.1
Migut.D01026 Erythranthe guttata HOM05D006417 ORTHO05D008113 2.2e-20 102.4 65 83.1
BolC5t30076H Brassica oleracea HOM05D006417 ORTHO05D008113 2.8e-20 102.1 62 87.1
Hund06616 Selenicereus undatus HOM05D006417 ORTHO05D008113 2.8e-20 102.1 65 83.1
C08p17070 Brassica napus HOM05D006417 ORTHO05D008113 3.7e-20 101.7 60 86.7
BolC8t49333H Brassica oleracea HOM05D006417 ORTHO05D008113 3.7e-20 101.7 60 86.7
HanXRQChr04g0096081 Helianthus annuus HOM05D006417 ORTHO05D008113 3.7e-20 101.7 65 87.7
Aa31LG8G3190 Aethionema arabicum HOM05D006417 ORTHO05D008113 4.9e-20 101.3 65 84.6
Haze_16401 Corylus avellana HOM05D006417 ORTHO05D008113 6.3e-20 100.9 65 86.2
Nn2g11755 Nelumbo nucifera HOM05D006417 ORTHO05D008113 6.3e-20 100.9 66 86.4
FAN26G3442 Fragaria x ananassa HOM05D006417 ORTHO05D008113 8.3e-20 100.5 65 86.2
Lsat_1_v5_gn_5_130340 Lactuca sativa HOM05D006417 ORTHO05D008113 8.3e-20 100.5 65 86.2
AL3G28690 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 1.1e-19 100.1 65 83.1
AL810U10020 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 1.1e-19 100.1 65 83.1
Glyma.20G047300 Glycine max HOM05D006417 ORTHO05D008113 1.1e-19 100.1 65 80.0
HanXRQChr12g0376701 Helianthus annuus HOM05D006417 ORTHO05D008113 1.4e-19 99.8 65 86.2
Cpa.g.sc41.8 Carica papaya HOM05D006417 ORTHO05D008113 1.8e-19 99.4 71 77.5
CiPaw.01G238100 Carya illinoinensis HOM05D006417 ORTHO05D008113 1.8e-19 99.4 65 84.6
Thhalv10022282m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 1.8e-19 99.4 73 71.2
CSS0028003 Camellia sinensis var. sinensis HOM05D006417 ORTHO05D008113 2.4e-19 99.0 59 88.1
DCAR_023056 Daucus carota HOM05D006417 ORTHO05D008113 2.4e-19 99.0 62 83.9
AT3G16040 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 3.1e-19 98.6 65 81.5
Carub.0003s1577 Capsella rubella HOM05D006417 ORTHO05D008113 3.1e-19 98.6 65 81.5
Gorai.006G098200 Gossypium raimondii HOM05D006417 ORTHO05D008113 3.1e-19 98.6 75 74.7
C05p50430 Brassica napus HOM05D006417 ORTHO05D008113 4.1e-19 98.2 84 67.9
CiPaw.02G150500 Carya illinoinensis HOM05D006417 ORTHO05D008113 4.1e-19 98.2 65 84.6
AagrBONN_evm.TU.Sc2ySwM_117.2290 Anthoceros agrestis HOM05D006417 ORTHO05D008113 5.4e-19 97.8 88 61.4
Lj3g0012949 Lotus japonicus HOM05D006417 ORTHO05D008113 5.4e-19 97.8 66 81.8
Sc12g0009320 Simmondsia chinensis HOM05D006417 ORTHO05D008113 7.0e-19 97.4 65 80.0
COL.COLO4_30395 Corchorus olitorius HOM05D006417 ORTHO05D008113 2.0e-18 95.9 65 80.0
Migut.I00879 Erythranthe guttata HOM05D006417 ORTHO05D008113 2.0e-18 95.9 61 82.0
CARHR091200 Cardamine hirsuta HOM05D006417 ORTHO05D008113 3.5e-18 95.1 65 80.0
Oeu063955.1 Olea europaea HOM05D006417 ORTHO05D008113 4.5e-18 94.7 65 83.1
Zm00001eb225700 Zea mays HOM05D006417 ORTHO05D008113 4.5e-18 94.7 63 84.1
Thhalv10009202m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 5.9e-18 94.4 93 62.4
EL10Ac9g22008 Beta vulgaris HOM05D006417 ORTHO05D008113 7.8e-18 94.0 65 76.9
Eucgr.J02983 Eucalyptus grandis HOM05D006417 ORTHO05D008113 7.8e-18 94.0 60 81.7
Cc04_g03270 Coffea canephora HOM05D006417 ORTHO05D008113 1.7e-17 92.8 64 79.7
SalBow2G0478 Salvia bowleyana HOM05D008308 ORTHO05D008113 2.3e-17 92.4 58 81.0
Pp3c24_10010 Physcomitrium patens HOM05D006417 ORTHO05D008113 2.9e-17 92.0 64 75.0
Sp3g14390 Schrenkiella parvula HOM05D006417 ORTHO05D008113 2.9e-17 92.0 65 78.5
arahy.Tifrunner.gnm1.ann1.6441EL Arachis hypogaea HOM05D006417 ORTHO05D008113 5.0e-17 91.3 90 60.0
BcaNung06587 Brassica carinata HOM05D006417 ORTHO05D008113 5.0e-17 91.3 60 80.0
GSVIVG01017091001 Vitis vinifera HOM05D006417 ORTHO05D008113 1.1e-16 90.1 65 75.4
Mapoly0091s0070 Marchantia polymorpha HOM05D006417 ORTHO05D008113 1.9e-16 89.4 62 75.8
Pp3c23_11500 Physcomitrium patens HOM05D006417 ORTHO05D008113 1.9e-16 89.4 64 71.9
Solyc12g043160.3 Solanum lycopersicum HOM05D006417 ORTHO05D008113 2.5e-16 89.0 65 76.9
FAN19G1924 Fragaria x ananassa HOM05D006417 ORTHO05D008113 4.3e-16 88.2 54 85.2
Peaxi162Scf00034g00611 Petunia axillaris HOM05D006417 ORTHO05D008113 4.3e-16 88.2 65 75.4
A05p33430 Brassica napus HOM05D006417 ORTHO05D008113 5.6e-16 87.8 63 76.2
FvH4_1g16510 Fragaria vesca HOM05D006417 ORTHO05D008113 5.6e-16 87.8 54 85.2
PGSC0003DMG400007579 Solanum tuberosum HOM05D006417 ORTHO05D008113 7.3e-16 87.4 65 75.4
SGA_v2.0_scaffold37G14829 Striga asiatica HOM05D006417 ORTHO05D008113 7.3e-16 87.4 65 70.8
BcaC05g28917 Brassica carinata HOM05D006417 ORTHO05D008113 1.2e-15 86.7 74 70.3
Glyma.14G136351 Glycine max HOM05D006417 ORTHO05D008113 3.6e-15 85.1 60 73.3
DCAR_007563 Daucus carota HOM05D006417 ORTHO05D008113 1.4e-14 83.2 65 70.8
DCAR_026325 Daucus carota HOM05D006417 ORTHO05D008113 1.4e-14 83.2 65 70.8
ECA247G1523 Erigeron canadensis HOM05D001142 ORTHO05D004628 1.4e-14 83.2 55 83.6
CAN.G144.3 Capsicum annuum HOM05D006417 ORTHO05D008113 9.8e-13 77.0 60 73.3
DCAR_002649 Daucus carota HOM05D006417 ORTHO05D008113 9.8e-13 77.0 60 70.0
Lsat_1_v5_gn_1_35180 Lactuca sativa HOM05D006417 ORTHO05D008113 6.4e-12 74.3 54 75.9
ClCG11G012700 Citrullus lanatus HOM05D006417 ORTHO05D008113 8.3e-12 73.9 67 64.2
Cre10.g438600 Chlamydomonas reinhardtii HOM05D006417 ORTHO05D008113 9.2e-11 70.5 63 65.1
BraA08t35089Z Brassica rapa HOM05D006417 ORTHO05D008113 6.0e-10 67.8 40 87.5
ClCG09G002080 Citrullus lanatus HOM05D000001 ORTHO05D000003 1.0e-09 67.0 43 81.4
Lalb_Chr04g0262751 Lupinus albus HOM05D006417 ORTHO05D008113 2.3e-09 65.9 40 85.0
Nitab4.5_0002859g0060 Nicotiana tabacum HOM05D006417 ORTHO05D008113 5.0e-09 64.7 65 61.5
Nitab4.5_0004241g0020 Nicotiana tabacum HOM05D006417 ORTHO05D008113 1.1e-08 63.5 69 56.5
CAN.G710.59 Capsicum annuum HOM05D006417 ORTHO05D115303 1.8e-06 56.2 43 67.4


User provided reference genes

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